RNA–Protein interactions for RNA: ENST00000350878.8

MAP4K4-205, Transcript of mitogen-activated protein kinase kinase kinase kinase 4, humanhuman

TSL 1 (best) BASIC

Gene MAP4K4, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP4K4-205ENST00000350878 ZRANB2O95218 330 aaKnown RBP eCLIP18.91■□□□□ 0.624e-23■■■■■ 305
MAP4K4-205ENST00000350878 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.01■□□□□ 0.312e-7■■■■■ 278.5
MAP4K4-205ENST00000350878 DDX6P26196 483 aaKnown RBP eCLIP16.65■□□□□ 0.264e-8■■■■■ 115
MAP4K4-205ENST00000350878 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.62■□□□□ 0.892e-6■■■■■ 85.7
MAP4K4-205ENST00000350878 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.21■□□□□ 0.355e-37■■■■■ 76.5
MAP4K4-205ENST00000350878 PCBP2Q15366 365 aaKnown RBP eCLIP16.59■□□□□ 0.251e-8■■■■■ 72
MAP4K4-205ENST00000350878 PABPC4Q13310 644 aaKnown RBP eCLIP17.9■□□□□ 0.469e-10■■■■■ 61.6
MAP4K4-205ENST00000350878 SF3B1O75533 1304 aaKnown RBP eCLIP17.33■□□□□ 0.362e-6■■■■■ 57.2
MAP4K4-205ENST00000350878 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.05■□□□□ 0.321e-7■■■■■ 48.7
MAP4K4-205ENST00000350878 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.57■□□□□ 0.46e-6■■■■■ 47.7
MAP4K4-205ENST00000350878 GTF2F1P35269 517 aaKnown RBP eCLIP20.15■□□□□ 0.824e-7■■■■■ 43.4
MAP4K4-205ENST00000350878 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.31■□□□□ 0.361e-7■■■■■ 40.4
MAP4K4-205ENST00000350878 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.93■□□□□ 0.461e-6■■■■■ 37.8
MAP4K4-205ENST00000350878 TIAL1Q01085 375 aaKnown RBP eCLIP15.49■□□□□ 0.074e-7■■■■■ 36.5
MAP4K4-205ENST00000350878 DDX3XO00571 662 aaKnown RBP eCLIP16.96■□□□□ 0.31e-53■■■■■ 35.9
MAP4K4-205ENST00000350878 PCBP1Q15365 356 aaKnown RBP eCLIP15.94■□□□□ 0.146e-7■■■■■ 35.7
MAP4K4-205ENST00000350878 LSM11P83369 360 aaKnown RBP eCLIP15.38■□□□□ 0.055e-15■■■■■ 34.7
MAP4K4-205ENST00000350878 HNRNPMP52272 730 aaKnown RBP eCLIP20.73■□□□□ 0.916e-7■■■■■ 34.6
MAP4K4-205ENST00000350878 TIA1P31483 386 aaKnown RBP eCLIP15.82■□□□□ 0.121e-6■■■■■ 34.4
MAP4K4-205ENST00000350878 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.97■□□□□ 0.152e-6■■■■■ 32.9
MAP4K4-205ENST00000350878 ILF3Q12906 894 aaKnown RBP eCLIP17■□□□□ 0.314e-10■■■■■ 31.2
MAP4K4-205ENST00000350878 SF3B4Q15427 424 aaKnown RBP eCLIP16.11■□□□□ 0.179e-10■■■■■ 31.2
MAP4K4-205ENST00000350878 EFTUD2Q15029 972 aaKnown RBP eCLIP18.14■□□□□ 0.493e-7■■■■■ 30.5
MAP4K4-205ENST00000350878 SF3A3Q12874 501 aaKnown RBP eCLIP19.46■□□□□ 0.711e-6■■■■■ 28.9
MAP4K4-205ENST00000350878 QKIQ96PU8 341 aaKnown RBP eCLIP17.78■□□□□ 0.449e-8■■■■□ 26.7
MAP4K4-205ENST00000350878 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.34■□□□□ 0.216e-11■■■■□ 25.2
MAP4K4-205ENST00000350878 AQRO60306 1485 aaKnown RBP eCLIP19.69■□□□□ 0.743e-7■■■■□ 24.4
MAP4K4-205ENST00000350878 TRA2AQ13595 282 aaKnown RBP eCLIP14.38□□□□□ -0.113e-13■■■■□ 24
MAP4K4-205ENST00000350878 HNRNPKP61978 463 aaKnown RBP eCLIP16.42■□□□□ 0.221e-6■■■■□ 23.9
MAP4K4-205ENST00000350878 NIPBLQ6KC79 2804 aaeCLIP8.53□□□□□ -1.041e-6■■■■□ 23.8
MAP4K4-205ENST00000350878 TAF15Q92804 592 aaKnown RBP eCLIP14.63□□□□□ -0.075e-7■■■■□ 23.2
MAP4K4-205ENST00000350878 DKC1O60832 514 aaKnown RBP eCLIP18.6■□□□□ 0.572e-17■■■■□ 23.1
MAP4K4-205ENST00000350878 YBX3P16989 372 aaKnown RBP eCLIP16.78■□□□□ 0.287e-7■■■■□ 23
MAP4K4-205ENST00000350878 NONOQ15233 471 aaKnown RBP eCLIP18.25■□□□□ 0.519e-7■■■■□ 22.5
MAP4K4-205ENST00000350878 FXR2P51116 673 aaKnown RBP eCLIP16.75■□□□□ 0.272e-7■■■■□ 22.2
MAP4K4-205ENST00000350878 BCCIPQ9P287 314 aaKnown RBP eCLIP20.39■□□□□ 0.868e-7■■■■□ 21.9
MAP4K4-205ENST00000350878 PRPF4O43172 522 aaKnown RBP eCLIP17.91■□□□□ 0.461e-6■■■■□ 21.6
MAP4K4-205ENST00000350878 UPF1Q92900 1129 aaKnown RBP eCLIP16.31■□□□□ 0.21e-6■■■■□ 21.6
MAP4K4-205ENST00000350878 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.86■□□□□ 0.132e-9■■■■□ 21.3
MAP4K4-205ENST00000350878 CDC40O60508 579 aaKnown RBP eCLIP17.83■□□□□ 0.449e-8■■■■□ 21.1
MAP4K4-205ENST00000350878 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.29■□□□□ 0.529e-7■■■■□ 21.1
MAP4K4-205ENST00000350878 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.13■□□□□ 0.654e-8■■■■□ 20.9
MAP4K4-205ENST00000350878 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.17□□□□□ -0.144e-7■■■■□ 19.9
MAP4K4-205ENST00000350878 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.07■□□□□ 0.649e-12■■■■□ 19.5
MAP4K4-205ENST00000350878 PTBP1P26599 531 aaKnown RBP eCLIP15.79■□□□□ 0.126e-7■■■□□ 19.2
MAP4K4-205ENST00000350878 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.71■□□□□ 0.753e-8■■■□□ 19.2
MAP4K4-205ENST00000350878 METAP2P50579 478 aaKnown RBP eCLIP18.96■□□□□ 0.633e-6■■■□□ 18.5
MAP4K4-205ENST00000350878 SRSF1Q07955 248 aaKnown RBP eCLIP14.33□□□□□ -0.111e-9■■■□□ 18.5
MAP4K4-205ENST00000350878 CSTF2P33240 577 aaKnown RBP eCLIP16.67■□□□□ 0.264e-7■■■□□ 18.4
MAP4K4-205ENST00000350878 RBM22Q9NW64 420 aaKnown RBP eCLIP16.95■□□□□ 0.33e-6■■■□□ 18
MAP4K4-205ENST00000350878 AARSP49588 968 aaKnown RBP eCLIP18.16■□□□□ 0.54e-6■■■□□ 17.5
MAP4K4-205ENST00000350878 MATR3P43243 847 aaKnown RBP eCLIP19.77■□□□□ 0.751e-6■■■□□ 17
MAP4K4-205ENST00000350878 HNRNPUQ00839 825 aaKnown RBP eCLIP22.79■■□□□ 1.243e-6■■■□□ 16.7
MAP4K4-205ENST00000350878 SMNDC1O75940 238 aaKnown RBP eCLIP17.96■□□□□ 0.461e-9■■■□□ 16.5
MAP4K4-205ENST00000350878 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.32■□□□□ 0.23e-8■■■□□ 16.1
MAP4K4-205ENST00000350878 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.42■□□□□ 0.862e-6■■■□□ 16
MAP4K4-205ENST00000350878 ZNF622Q969S3 477 aaKnown RBP eCLIP19.28■□□□□ 0.687e-8■■■□□ 15.7
MAP4K4-205ENST00000350878 SUB1P53999 127 aaKnown RBP eCLIP15.46■□□□□ 0.068e-6■■■□□ 15.4
MAP4K4-205ENST00000350878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.61■■□□□ 1.217e-10■■■□□ 15.3
MAP4K4-205ENST00000350878 KHSRPQ92945 711 aaKnown RBP eCLIP15.61■□□□□ 0.091e-7■■■□□ 15
MAP4K4-205ENST00000350878 U2AF2P26368 475 aaKnown RBP eCLIP19.35■□□□□ 0.694e-9■■■□□ 14.9
MAP4K4-205ENST00000350878 FMR1Q06787 632 aaKnown RBP eCLIP17.36■□□□□ 0.371e-6■■■□□ 14.9
MAP4K4-205ENST00000350878 HNRNPLP14866 589 aaKnown RBP eCLIP16.92■□□□□ 0.31e-6■■■□□ 14.8
MAP4K4-205ENST00000350878 FUBP3Q96I24 572 aaKnown RBP eCLIP15.68■□□□□ 0.11e-6■■■□□ 14.6
MAP4K4-205ENST00000350878 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.69■□□□□ 0.262e-6■■■□□ 14.6
MAP4K4-205ENST00000350878 RBFOX2O43251 390 aaKnown RBP eCLIP14.98□□□□□ -0.011e-6■■■□□ 14.6
MAP4K4-205ENST00000350878 TARDBPQ13148 414 aaKnown RBP eCLIP16.67■□□□□ 0.262e-7■■■□□ 14.6
MAP4K4-205ENST00000350878 LARP4Q71RC2 724 aaKnown RBP eCLIP15.65■□□□□ 0.16e-13■■□□□ 14.4
MAP4K4-205ENST00000350878 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.01■□□□□ 0.158e-8■■□□□ 14.4
MAP4K4-205ENST00000350878 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.3■□□□□ 0.361e-7■■□□□ 14.3
MAP4K4-205ENST00000350878 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.2■□□□□ 0.182e-7■■□□□ 13.9
MAP4K4-205ENST00000350878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.19■□□□□ 0.341e-8■■□□□ 13.9
MAP4K4-205ENST00000350878 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.83■□□□□ 0.933e-7■■□□□ 13.8
MAP4K4-205ENST00000350878 PUM1Q14671 1186 aaKnown RBP eCLIP16.72■□□□□ 0.277e-7■■□□□ 13.7
MAP4K4-205ENST00000350878 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.28■□□□□ 0.682e-6■■□□□ 13.7
MAP4K4-205ENST00000350878 AGGF1Q8N302 714 aaeCLIP17.8■□□□□ 0.444e-10■■□□□ 13.7
MAP4K4-205ENST00000350878 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.37■□□□□ 0.215e-6■■□□□ 13.6
MAP4K4-205ENST00000350878 EIF3HO15372 352 aaKnown RBP eCLIP17.85■□□□□ 0.452e-7■■□□□ 13.6
MAP4K4-205ENST00000350878 ZC3H11AO75152 810 aaKnown RBP eCLIP17.18■□□□□ 0.346e-17■■□□□ 13.5
MAP4K4-205ENST00000350878 HNRNPCP07910 306 aaKnown RBP eCLIP18.73■□□□□ 0.599e-7■■□□□ 13.4
MAP4K4-205ENST00000350878 RBM15Q96T37 977 aaKnown RBP eCLIP17.6■□□□□ 0.412e-6■■□□□ 13.1
MAP4K4-205ENST00000350878 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.75■□□□□ 0.433e-14■■□□□ 12.8
MAP4K4-205ENST00000350878 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.09■□□□□ 0.331e-6■■□□□ 12.2
MAP4K4-205ENST00000350878 FTOQ9C0B1 505 aaKnown RBP eCLIP18.25■□□□□ 0.513e-8■■□□□ 11.9
MAP4K4-205ENST00000350878 PABPN1Q86U42 306 aaKnown RBP eCLIP23.7■■□□□ 1.383e-6■■□□□ 11.7
MAP4K4-205ENST00000350878 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.39■□□□□ 0.691e-6■■□□□ 11.7
MAP4K4-205ENST00000350878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.33■□□□□ 0.372e-6■■□□□ 11.5
MAP4K4-205ENST00000350878 SFPQP23246 707 aaKnown RBP eCLIP19.72■□□□□ 0.756e-7■□□□□ 10.6
MAP4K4-205ENST00000350878 GPKOWQ92917 476 aaPredicted RBP eCLIP18.14■□□□□ 0.497e-7■□□□□ 10.4
MAP4K4-205ENST00000350878 PPIGQ13427 754 aaKnown RBP eCLIP16.47■□□□□ 0.231e-13■□□□□ 10.3
MAP4K4-205ENST00000350878 G3BP1Q13283 466 aaKnown RBP eCLIP19.91■□□□□ 0.785e-7■□□□□ 10.1
MAP4K4-205ENST00000350878 HLTFQ14527 1009 aaKnown RBP eCLIP19.78■□□□□ 0.762e-6■□□□□ 10
MAP4K4-205ENST00000350878 SRSF9Q13242 221 aaKnown RBP eCLIP15.48■□□□□ 0.078e-14■□□□□ 9.7
MAP4K4-205ENST00000350878 WDR43Q15061 677 aaKnown RBP eCLIP22.14■■□□□ 1.138e-7■□□□□ 8.3
MAP4K4-205ENST00000350878 TROVE2P10155 538 aaKnown RBP eCLIP18.77■□□□□ 0.596e-10■□□□□ 8.3
MAP4K4-205ENST00000350878 NCBP2P52298 156 aaKnown RBP eCLIP16.42■□□□□ 0.229e-10■□□□□ 8.1
Retrieved 96 of 96 RNA–protein pairs in 14.1 ms