RNA–Protein interactions for RNA: ENST00000350796.7

CYTH3-201, Transcript of cytohesin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CYTH3, Length 4,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-201ENST00000350796 TROVE2P10155 538 aaKnown RBP eCLIP15.86■□□□□ 0.133e-30■■■■■ 279.8
CYTH3-201ENST00000350796 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.65■□□□□ 0.263e-8■■■■■ 215.5
CYTH3-201ENST00000350796 SF3B1O75533 1304 aaKnown RBP eCLIP14.88□□□□□ -0.033e-6■■■■■ 75.9
CYTH3-201ENST00000350796 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.35■□□□□ 0.053e-8■■■■■ 70.6
CYTH3-201ENST00000350796 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.11□□□□□ -0.152e-14■■■■■ 49.6
CYTH3-201ENST00000350796 EIF4G2P78344 907 aaKnown RBP eCLIP20.18■□□□□ 0.823e-6■■■■■ 32.5
CYTH3-201ENST00000350796 AKAP1Q92667 903 aaKnown RBP eCLIP13.82□□□□□ -0.22e-6■■■■■ 30.1
CYTH3-201ENST00000350796 UPF1Q92900 1129 aaKnown RBP eCLIP14.76□□□□□ -0.055e-7■■■■■ 29.7
CYTH3-201ENST00000350796 DDX3XO00571 662 aaKnown RBP eCLIP15.64■□□□□ 0.094e-12■■■■■ 29.4
CYTH3-201ENST00000350796 PCBP2Q15366 365 aaKnown RBP eCLIP14.46□□□□□ -0.095e-15■■■■■ 28
CYTH3-201ENST00000350796 GTF2F1P35269 517 aaKnown RBP eCLIP16.82■□□□□ 0.289e-7■■■■■ 27.6
CYTH3-201ENST00000350796 DDX6P26196 483 aaKnown RBP eCLIP14.2□□□□□ -0.147e-7■■■■■ 27.5
CYTH3-201ENST00000350796 RBFOX2O43251 390 aaKnown RBP eCLIP12.25□□□□□ -0.454e-7■■■■□ 26.5
CYTH3-201ENST00000350796 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.47■□□□□ 0.074e-6■■■■□ 26.5
CYTH3-201ENST00000350796 PUM1Q14671 1186 aaKnown RBP eCLIP14.05□□□□□ -0.166e-6■■■■□ 24.2
CYTH3-201ENST00000350796 NONOQ15233 471 aaKnown RBP eCLIP16.62■□□□□ 0.252e-6■■■■□ 22.7
CYTH3-201ENST00000350796 FXR2P51116 673 aaKnown RBP eCLIP15.87■□□□□ 0.138e-6■■■■□ 21.8
CYTH3-201ENST00000350796 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.69□□□□□ -0.222e-6■■■■□ 21.1
CYTH3-201ENST00000350796 YBX3P16989 372 aaKnown RBP eCLIP15.21■□□□□ 0.023e-8■■■□□ 15.5
CYTH3-201ENST00000350796 HNRNPMP52272 730 aaKnown RBP eCLIP19.54■□□□□ 0.722e-7■■□□□ 14.5
CYTH3-201ENST00000350796 KHSRPQ92945 711 aaKnown RBP eCLIP14.47□□□□□ -0.093e-7■■□□□ 12.8
CYTH3-201ENST00000350796 TIA1P31483 386 aaKnown RBP eCLIP14.24□□□□□ -0.131e-33■□□□□ 11.3
CYTH3-201ENST00000350796 EWSR1Q01844 656 aaKnown RBP eCLIP12.82□□□□□ -0.362e-6■□□□□ 9.9
CYTH3-201ENST00000350796 ZNF622Q969S3 477 aaKnown RBP eCLIP16.92■□□□□ 0.39e-6■□□□□ 9.4
CYTH3-201ENST00000350796 SF3B4Q15427 424 aaKnown RBP eCLIP13.64□□□□□ -0.232e-7■□□□□ 9
Retrieved 25 of 25 RNA–protein pairs in 6.8 ms