RNA–Protein interactions for RNA: ENST00000346279.3

XAGE3-201, Transcript of X antigen family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XAGE3, Length 497 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XAGE3-201ENST00000346279 AEBP2Q6ZN18 517 aaPredicted RBP28.98■■■□□ 2.23
XAGE3-201ENST00000346279 CHIC1Q5VXU3 224 aa27.05■■□□□ 1.92
XAGE3-201ENST00000346279 SENP3Q9H4L4 574 aaPredicted RBP24.83■■□□□ 1.57
XAGE3-201ENST00000346279 PHF23Q9BUL5 403 aaPredicted RBP24.4■■□□□ 1.5
XAGE3-201ENST00000346279 FOXD1Q16676 465 aa23.25■■□□□ 1.31
XAGE3-201ENST00000346279 POTEDQ86YR6 584 aa22.87■■□□□ 1.25
XAGE3-201ENST00000346279 MSH5O43196 834 aa22.05■■□□□ 1.12
XAGE3-201ENST00000346279 PIAS4Q8N2W9 510 aaPredicted RBP21.52■■□□□ 1.04
XAGE3-201ENST00000346279 PPP6R1Q9UPN7 881 aa21.14■□□□□ 0.97
XAGE3-201ENST00000346279 ADRA2BP18089 450 aa21.01■□□□□ 0.95
XAGE3-201ENST00000346279 PLPPR3Q6T4P5 718 aa21■□□□□ 0.95
XAGE3-201ENST00000346279 DMRT2Q9Y5R5 561 aa19.57■□□□□ 0.72
XAGE3-201ENST00000346279 MAPK8IP2Q13387 824 aaPredicted RBP19.55■□□□□ 0.72
XAGE3-201ENST00000346279 CACNB1Q02641 598 aaPredicted RBP19.4■□□□□ 0.7
XAGE3-201ENST00000346279 SCAF1Q9H7N4 1312 aaKnown RBP19.22■□□□□ 0.67
XAGE3-201ENST00000346279 DCAF8L1A6NGE4 600 aa18.78■□□□□ 0.6
XAGE3-201ENST00000346279 RNF39Q9H2S5 420 aa18.75■□□□□ 0.59
XAGE3-201ENST00000346279 HOXD11P31277 338 aaPredicted RBP18.55■□□□□ 0.56
XAGE3-201ENST00000346279 C1QBPQ07021 282 aaKnown RBP18.42■□□□□ 0.54
XAGE3-201ENST00000346279 PPP4R3CPQ6ZMV5 832 aa18.31■□□□□ 0.52
XAGE3-201ENST00000346279 RNF216Q9NWF9 866 aaPredicted RBP18.19■□□□□ 0.5
XAGE3-201ENST00000346279 CNKSR2Q8WXI2 1034 aa18.15■□□□□ 0.5
XAGE3-201ENST00000346279 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
XAGE3-201ENST00000346279 POTEHQ6S545 545 aa17.76■□□□□ 0.43
XAGE3-201ENST00000346279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.65■□□□□ 0.42
XAGE3-201ENST00000346279 NCBP3Q53F19 620 aaKnown RBP17.49■□□□□ 0.39
XAGE3-201ENST00000346279 DSG3P32926 999 aa17.29■□□□□ 0.36
XAGE3-201ENST00000346279 U3KPZ7 1027 aaPredicted RBP17.21■□□□□ 0.35
XAGE3-201ENST00000346279 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
XAGE3-201ENST00000346279 CAPN15O75808 1086 aa17.19■□□□□ 0.34
XAGE3-201ENST00000346279 NPM3O75607 178 aaKnown RBP17.13■□□□□ 0.33
XAGE3-201ENST00000346279 ABCB7O75027 752 aa16.72■□□□□ 0.27
XAGE3-201ENST00000346279 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
XAGE3-201ENST00000346279 ZNF219Q9P2Y4 722 aaPredicted RBP16.66■□□□□ 0.26
XAGE3-201ENST00000346279 APLP2Q06481 763 aa16.62■□□□□ 0.25
XAGE3-201ENST00000346279 SLC4A2P04920 1241 aa16.57■□□□□ 0.24
XAGE3-201ENST00000346279 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
XAGE3-201ENST00000346279 NISCHQ9Y2I1 1504 aa16.49■□□□□ 0.23
XAGE3-201ENST00000346279 KCNA4P22459 653 aa16.48■□□□□ 0.23
XAGE3-201ENST00000346279 CHRDL2Q6WN34 429 aa16.47■□□□□ 0.23
XAGE3-201ENST00000346279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.42■□□□□ 0.22
XAGE3-201ENST00000346279 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
XAGE3-201ENST00000346279 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
XAGE3-201ENST00000346279 SP7Q8TDD2 431 aaPredicted RBP16.28■□□□□ 0.2
XAGE3-201ENST00000346279 POLA2Q14181 598 aa16.1■□□□□ 0.17
XAGE3-201ENST00000346279 AKT1S1Q96B36 256 aa15.97■□□□□ 0.15
XAGE3-201ENST00000346279 PIP4P2Q8N4L2 257 aa15.91■□□□□ 0.14
XAGE3-201ENST00000346279 MYCNP04198 464 aaPredicted RBP15.9■□□□□ 0.14
XAGE3-201ENST00000346279 HAX1O00165 279 aa15.83■□□□□ 0.12
XAGE3-201ENST00000346279 REM2Q8IYK8 340 aaPredicted RBP15.83■□□□□ 0.12
XAGE3-201ENST00000346279 ZBTB12Q9Y330 459 aaPredicted RBP15.7■□□□□ 0.1
XAGE3-201ENST00000346279 FXR2P51116 673 aaKnown RBP eCLIP15.69■□□□□ 0.1
XAGE3-201ENST00000346279 PITPNM1O00562 1244 aa15.66■□□□□ 0.1
XAGE3-201ENST00000346279 OSCARQ8IYS5 282 aa15.62■□□□□ 0.09
XAGE3-201ENST00000346279 EVX2Q03828 476 aa15.59■□□□□ 0.09
XAGE3-201ENST00000346279 ATF5Q9Y2D1 282 aaPredicted RBP15.56■□□□□ 0.08
XAGE3-201ENST00000346279 SLC4A1APQ9BWU0 796 aaKnown RBP15.53■□□□□ 0.08
XAGE3-201ENST00000346279 FOXD4L1Q9NU39 408 aa15.53■□□□□ 0.08
XAGE3-201ENST00000346279 LHX8Q68G74 356 aa15.26■□□□□ 0.03
XAGE3-201ENST00000346279 PRKAR2AP13861 404 aaKnown RBP15.24■□□□□ 0.03
XAGE3-201ENST00000346279 C19orf67A6NJJ6 358 aa15.22■□□□□ 0.03
XAGE3-201ENST00000346279 GABBR2O75899 941 aa15.19■□□□□ 0.02
XAGE3-201ENST00000346279 SPDYE2BA6NHP3 402 aa15.16■□□□□ 0.02
XAGE3-201ENST00000346279 SPDYE6P0CI01 402 aa15.16■□□□□ 0.02
XAGE3-201ENST00000346279 SPDYE2Q495Y8 402 aa15.16■□□□□ 0.02
XAGE3-201ENST00000346279 ATXN8OSP0DMR3 200 aa15.1■□□□□ 0.01
XAGE3-201ENST00000346279 CLEC11AQ9Y240 323 aa15.1■□□□□ 0.01
XAGE3-201ENST00000346279 SPDYE1Q8NFV5 336 aaPredicted RBP15.09■□□□□ 0.01
XAGE3-201ENST00000346279 ZBTB22O15209 634 aa15.08■□□□□ 0
XAGE3-201ENST00000346279 FBLN2P98095 1184 aa15.03■□□□□ -0
XAGE3-201ENST00000346279 PLSCR2Q9NRY7 297 aa14.93□□□□□ -0.02
XAGE3-201ENST00000346279 CHADLQ6NUI6 762 aa14.9□□□□□ -0.02
XAGE3-201ENST00000346279 SSUH2Q9Y2M2 353 aa14.88□□□□□ -0.03
XAGE3-201ENST00000346279 POTEIP0CG38 1075 aa14.87□□□□□ -0.03
XAGE3-201ENST00000346279 ZNF692Q9BU19 519 aaPredicted RBP14.84□□□□□ -0.03
XAGE3-201ENST00000346279 MKRN4PQ13434 485 aaPredicted RBP14.8□□□□□ -0.04
XAGE3-201ENST00000346279 PRR29P0C7W0 189 aa14.74□□□□□ -0.05
XAGE3-201ENST00000346279 CD44P16070 742 aaKnown RBP14.71□□□□□ -0.05
XAGE3-201ENST00000346279 CLCN6P51797 869 aa14.67□□□□□ -0.06
XAGE3-201ENST00000346279 CCDC180Q9P1Z9 1646 aa14.63□□□□□ -0.07
XAGE3-201ENST00000346279 PABPN1Q86U42 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
XAGE3-201ENST00000346279 FARP1Q9Y4F1 1045 aaPredicted RBP14.61□□□□□ -0.07
XAGE3-201ENST00000346279 DCBLD2Q96PD2 775 aa14.6□□□□□ -0.07
XAGE3-201ENST00000346279 ABCC9O60706 1549 aa14.49□□□□□ -0.09
XAGE3-201ENST00000346279 OTUD5Q96G74 571 aa14.47□□□□□ -0.09
XAGE3-201ENST00000346279 ZNF579Q8NAF0 562 aaKnown RBP14.46□□□□□ -0.09
XAGE3-201ENST00000346279 POTEMA6NI47 508 aa14.41□□□□□ -0.1
XAGE3-201ENST00000346279 ZRANB1Q9UGI0 708 aa14.38□□□□□ -0.11
XAGE3-201ENST00000346279 POTEB2H3BUK9 544 aa14.37□□□□□ -0.11
XAGE3-201ENST00000346279 GALR2O43603 387 aaPredicted RBP14.34□□□□□ -0.11
XAGE3-201ENST00000346279 POTEGQ6S5H5 508 aa14.34□□□□□ -0.11
XAGE3-201ENST00000346279 PCDH10Q9P2E7 1040 aa14.21□□□□□ -0.13
XAGE3-201ENST00000346279 CREBZFQ9NS37 354 aa14.2□□□□□ -0.14
XAGE3-201ENST00000346279 PELP1Q8IZL8 1130 aaKnown RBP14.15□□□□□ -0.14
XAGE3-201ENST00000346279 PHF12Q96QT6 1004 aa14.13□□□□□ -0.15
XAGE3-201ENST00000346279 CSRNP3Q8WYN3 585 aa14.12□□□□□ -0.15
XAGE3-201ENST00000346279 STAG3Q9UJ98 1225 aa14.12□□□□□ -0.15
XAGE3-201ENST00000346279 PAK3O75914 559 aaPredicted RBP14.08□□□□□ -0.16
XAGE3-201ENST00000346279 POTEJP0CG39 1038 aa14.03□□□□□ -0.16
XAGE3-201ENST00000346279 METRNQ9UJH8 293 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms