RNA–Protein interactions for RNA: ENST00000345517.7

ACTG2-201, Transcript of actin, gamma 2, smooth muscle, enteric, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTG2, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG2-201ENST00000345517 NISCHQ9Y2I1 1504 aa24.23■■□□□ 1.47
ACTG2-201ENST00000345517 CCDC180Q9P1Z9 1646 aa21.27■■□□□ 1
ACTG2-201ENST00000345517 ZCCHC6Q5VYS8 1495 aaKnown RBP20.34■□□□□ 0.85
ACTG2-201ENST00000345517 ABCC9O60706 1549 aa20.28■□□□□ 0.84
ACTG2-201ENST00000345517 DCAF8L2P0C7V8 631 aa20.02■□□□□ 0.8
ACTG2-201ENST00000345517 DCAF1Q9Y4B6 1507 aa20■□□□□ 0.79
ACTG2-201ENST00000345517 MYO15BQ96JP2 1530 aa19.81■□□□□ 0.76
ACTG2-201ENST00000345517 NACADO15069 1562 aa19.8■□□□□ 0.76
ACTG2-201ENST00000345517 RB1CC1Q8TDY2 1594 aa19.7■□□□□ 0.74
ACTG2-201ENST00000345517 SHROOM4Q9ULL8 1493 aa19.66■□□□□ 0.74
ACTG2-201ENST00000345517 SCRIBQ14160 1630 aa19.57■□□□□ 0.72
ACTG2-201ENST00000345517 UNC13AQ9UPW8 1703 aa19.4■□□□□ 0.7
ACTG2-201ENST00000345517 BICRAQ9NZM4 1560 aa19.15■□□□□ 0.66
ACTG2-201ENST00000345517 PABPN1Q86U42 306 aaKnown RBP eCLIP19.04■□□□□ 0.64
ACTG2-201ENST00000345517 CECR2Q9BXF3 1484 aa18.86■□□□□ 0.61
ACTG2-201ENST00000345517 SUPT5HO00267 1087 aaKnown RBP18.75■□□□□ 0.59
ACTG2-201ENST00000345517 MROH2BQ7Z745 1585 aa18.74■□□□□ 0.59
ACTG2-201ENST00000345517 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
ACTG2-201ENST00000345517 SMARCA4P51532 1647 aa18.71■□□□□ 0.59
ACTG2-201ENST00000345517 RSF1Q96T23 1441 aaPredicted RBP18.7■□□□□ 0.58
ACTG2-201ENST00000345517 WIZO95785 1651 aa18.61■□□□□ 0.57
ACTG2-201ENST00000345517 EIF4G1Q04637 1599 aaKnown RBP18.57■□□□□ 0.56
ACTG2-201ENST00000345517 PEG3Q9GZU2 1588 aa18.44■□□□□ 0.54
ACTG2-201ENST00000345517 ATAD2BQ9ULI0 1458 aa18.4■□□□□ 0.54
ACTG2-201ENST00000345517 SMARCA2P51531 1590 aa18.39■□□□□ 0.53
ACTG2-201ENST00000345517 TOP2AP11388 1531 aaKnown RBP18.38■□□□□ 0.53
ACTG2-201ENST00000345517 CC2D2AQ9P2K1 1620 aa18.36■□□□□ 0.53
ACTG2-201ENST00000345517 BAZ1BQ9UIG0 1483 aaKnown RBP18.3■□□□□ 0.52
ACTG2-201ENST00000345517 HMGXB3Q12766 1538 aa18.25■□□□□ 0.51
ACTG2-201ENST00000345517 NCAPD3P42695 1498 aa18.24■□□□□ 0.51
ACTG2-201ENST00000345517 CCDC88BA6NC98 1476 aa18.15■□□□□ 0.5
ACTG2-201ENST00000345517 DNAJC5BQ9UF47 199 aa18.01■□□□□ 0.47
ACTG2-201ENST00000345517 CHIC1Q5VXU3 224 aa17.82■□□□□ 0.44
ACTG2-201ENST00000345517 PRDM2Q13029 1718 aa17.82■□□□□ 0.44
ACTG2-201ENST00000345517 CFTRP13569 1480 aa17.8■□□□□ 0.44
ACTG2-201ENST00000345517 ABCC8Q09428 1581 aa17.79■□□□□ 0.44
ACTG2-201ENST00000345517 CADPSQ9ULU8 1353 aa17.75■□□□□ 0.43
ACTG2-201ENST00000345517 NESP48681 1621 aa17.75■□□□□ 0.43
ACTG2-201ENST00000345517 LAMC3Q9Y6N6 1575 aa17.7■□□□□ 0.42
ACTG2-201ENST00000345517 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
ACTG2-201ENST00000345517 WRNQ14191 1432 aaPredicted RBP eCLIP17.61■□□□□ 0.41
ACTG2-201ENST00000345517 TRIM41Q8WV44 630 aa17.61■□□□□ 0.41
ACTG2-201ENST00000345517 FANCD2Q9BXW9 1451 aa17.61■□□□□ 0.41
ACTG2-201ENST00000345517 KIF21AQ7Z4S6 1674 aa17.6■□□□□ 0.41
ACTG2-201ENST00000345517 BIVM-ERCC5R4GMW8 1640 aa17.55■□□□□ 0.4
ACTG2-201ENST00000345517 CUX1P39880 1505 aa17.55■□□□□ 0.4
ACTG2-201ENST00000345517 TOP2BQ02880 1626 aa17.53■□□□□ 0.4
ACTG2-201ENST00000345517 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
ACTG2-201ENST00000345517 PDS5BQ9NTI5 1447 aa17.51■□□□□ 0.39
ACTG2-201ENST00000345517 DNMBPQ6XZF7 1577 aa17.44■□□□□ 0.38
ACTG2-201ENST00000345517 URB2Q14146 1524 aaKnown RBP17.43■□□□□ 0.38
ACTG2-201ENST00000345517 TOPBP1Q92547 1522 aa17.41■□□□□ 0.38
ACTG2-201ENST00000345517 ERCC6Q03468 1493 aa17.38■□□□□ 0.37
ACTG2-201ENST00000345517 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
ACTG2-201ENST00000345517 MRC2Q9UBG0 1479 aa17.36■□□□□ 0.37
ACTG2-201ENST00000345517 SOGA1O94964 1423 aa17.36■□□□□ 0.37
ACTG2-201ENST00000345517 FAM9AQ8IZU1 332 aaPredicted RBP17.34■□□□□ 0.37
ACTG2-201ENST00000345517 THOC2Q8NI27 1593 aaKnown RBP17.33■□□□□ 0.37
ACTG2-201ENST00000345517 RUSC2Q8N2Y8 1516 aa17.32■□□□□ 0.36
ACTG2-201ENST00000345517 POLA1P09884 1462 aaPredicted RBP17.31■□□□□ 0.36
ACTG2-201ENST00000345517 WDR62O43379 1518 aa17.29■□□□□ 0.36
ACTG2-201ENST00000345517 RAD54L2Q9Y4B4 1467 aa17.26■□□□□ 0.35
ACTG2-201ENST00000345517 WDR97A6NE52 1622 aa17.25■□□□□ 0.35
ACTG2-201ENST00000345517 CUX2O14529 1486 aa17.21■□□□□ 0.35
ACTG2-201ENST00000345517 EEA1Q15075 1411 aa17.21■□□□□ 0.34
ACTG2-201ENST00000345517 TARBP1Q13395 1621 aaKnown RBP17.19■□□□□ 0.34
ACTG2-201ENST00000345517 ABCA10Q8WWZ4 1543 aa17.18■□□□□ 0.34
ACTG2-201ENST00000345517 KIF27Q86VH2 1401 aa17.16■□□□□ 0.34
ACTG2-201ENST00000345517 LOC105371045A0A1W2PR82 267 aa17.16■□□□□ 0.34
ACTG2-201ENST00000345517 EHMT2Q96KQ7 1210 aa17.15■□□□□ 0.34
ACTG2-201ENST00000345517 ABCA5Q8WWZ7 1642 aa17.12■□□□□ 0.33
ACTG2-201ENST00000345517 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
ACTG2-201ENST00000345517 IFT140Q96RY7 1462 aa17.09■□□□□ 0.33
ACTG2-201ENST00000345517 KIF21BO75037 1637 aa17.09■□□□□ 0.33
ACTG2-201ENST00000345517 TDRD9Q8NDG6 1382 aaKnown RBP17.07■□□□□ 0.32
ACTG2-201ENST00000345517 PBRM1Q86U86 1689 aa17.06■□□□□ 0.32
ACTG2-201ENST00000345517 ZNF608Q9ULD9 1512 aaPredicted RBP17.05■□□□□ 0.32
ACTG2-201ENST00000345517 EIF4G3O43432 1585 aaKnown RBP17.04■□□□□ 0.32
ACTG2-201ENST00000345517 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
ACTG2-201ENST00000345517 GOLGA3Q08378 1498 aa17.02■□□□□ 0.32
ACTG2-201ENST00000345517 AQRO60306 1485 aaKnown RBP eCLIP17.01■□□□□ 0.31
ACTG2-201ENST00000345517 PRXQ9BXM0 1461 aa17.01■□□□□ 0.31
ACTG2-201ENST00000345517 RAPGEF2Q9Y4G8 1499 aa17.01■□□□□ 0.31
ACTG2-201ENST00000345517 IGF1RP08069 1367 aa17.01■□□□□ 0.31
ACTG2-201ENST00000345517 CUL7Q14999 1698 aa16.99■□□□□ 0.31
ACTG2-201ENST00000345517 ERICH3Q5RHP9 1530 aa16.98■□□□□ 0.31
ACTG2-201ENST00000345517 CARMIL1Q5VZK9 1371 aa16.92■□□□□ 0.3
ACTG2-201ENST00000345517 ADAMTS12P58397 1594 aa16.92■□□□□ 0.3
ACTG2-201ENST00000345517 GRIN2BQ13224 1484 aa16.92■□□□□ 0.3
ACTG2-201ENST00000345517 UBTFP17480 764 aaKnown RBP16.9■□□□□ 0.3
ACTG2-201ENST00000345517 SNAPC4Q5SXM2 1469 aa16.88■□□□□ 0.29
ACTG2-201ENST00000345517 TNIKQ9UKE5 1360 aa16.88■□□□□ 0.29
ACTG2-201ENST00000345517 CEP162Q5TB80 1403 aa16.83■□□□□ 0.28
ACTG2-201ENST00000345517 FHAD1B1AJZ9 1412 aa16.82■□□□□ 0.28
ACTG2-201ENST00000345517 CTTNBP2Q8WZ74 1663 aa16.82■□□□□ 0.28
ACTG2-201ENST00000345517 MAGI1Q96QZ7 1491 aaPredicted RBP16.8■□□□□ 0.28
ACTG2-201ENST00000345517 RANGAP1P46060 587 aaPredicted RBP16.75■□□□□ 0.27
ACTG2-201ENST00000345517 SYNJ2O15056 1496 aa16.75■□□□□ 0.27
ACTG2-201ENST00000345517 GRIN2AQ12879 1464 aa16.74■□□□□ 0.27
ACTG2-201ENST00000345517 CLIP1P30622 1438 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms