RNA–Protein interactions for RNA: ENST00000345136.7

PLEC-202, Transcript of plectin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PLEC, Length 14,803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEC-202ENST00000345136 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.55□□□□□ -0.087e-7■■■■■ 126.6
PLEC-202ENST00000345136 SF3B1O75533 1304 aaKnown RBP eCLIP12.49□□□□□ -0.412e-6■■■■■ 80.3
PLEC-202ENST00000345136 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.75□□□□□ -0.371e-7■■■■■ 60.5
PLEC-202ENST00000345136 WRNQ14191 1432 aaPredicted RBP eCLIP14.27□□□□□ -0.129e-6■■■■■ 50.1
PLEC-202ENST00000345136 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.1□□□□□ -0.312e-8■■■■■ 39.2
PLEC-202ENST00000345136 EFTUD2Q15029 972 aaKnown RBP eCLIP12.86□□□□□ -0.355e-7■■■■■ 35.2
PLEC-202ENST00000345136 AQRO60306 1485 aaKnown RBP eCLIP12.8□□□□□ -0.367e-7■■■■■ 34.7
PLEC-202ENST00000345136 FXR2P51116 673 aaKnown RBP eCLIP12.21□□□□□ -0.452e-7■■■■■ 33.5
PLEC-202ENST00000345136 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.27□□□□□ -0.452e-7■■■■■ 33.4
PLEC-202ENST00000345136 UPF1Q92900 1129 aaKnown RBP eCLIP11.76□□□□□ -0.537e-8■■■■■ 33
PLEC-202ENST00000345136 SF3B4Q15427 424 aaKnown RBP eCLIP11.48□□□□□ -0.576e-7■■■■■ 31.9
PLEC-202ENST00000345136 FXR1P51114 621 aaKnown RBP eCLIP12.18□□□□□ -0.462e-11■■■■■ 31.3
PLEC-202ENST00000345136 HNRNPMP52272 730 aaKnown RBP eCLIP13.92□□□□□ -0.183e-9■■■■■ 30.9
PLEC-202ENST00000345136 AKAP1Q92667 903 aaKnown RBP eCLIP12.16□□□□□ -0.465e-7■■■■■ 30.5
PLEC-202ENST00000345136 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.71□□□□□ -0.693e-9■■■■■ 30.4
PLEC-202ENST00000345136 FMR1Q06787 632 aaKnown RBP eCLIP12.21□□□□□ -0.464e-7■■■■■ 29.8
PLEC-202ENST00000345136 QKIQ96PU8 341 aaKnown RBP eCLIP12.65□□□□□ -0.382e-9■■■■■ 29.7
PLEC-202ENST00000345136 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.69□□□□□ -0.227e-8■■■■■ 29.4
PLEC-202ENST00000345136 EIF3HO15372 352 aaKnown RBP eCLIP12.62□□□□□ -0.395e-9■■■■■ 28.6
PLEC-202ENST00000345136 PABPC4Q13310 644 aaKnown RBP eCLIP12.85□□□□□ -0.351e-6■■■■■ 28.5
PLEC-202ENST00000345136 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.26□□□□□ -0.131e-6■■■■■ 28.1
PLEC-202ENST00000345136 GTF2F1P35269 517 aaKnown RBP eCLIP13.86□□□□□ -0.192e-6■■■■■ 27.7
PLEC-202ENST00000345136 YWHAGP61981 247 aaKnown RBP eCLIP13.04□□□□□ -0.321e-6■■■■■ 27.6
PLEC-202ENST00000345136 NONOQ15233 471 aaKnown RBP eCLIP13.17□□□□□ -0.37e-8■■■■■ 27.1
PLEC-202ENST00000345136 EWSR1Q01844 656 aaKnown RBP eCLIP10.54□□□□□ -0.722e-6■■■■□ 25.8
PLEC-202ENST00000345136 GRSF1Q12849 480 aaKnown RBP eCLIP12.02□□□□□ -0.493e-7■■■■□ 24.8
PLEC-202ENST00000345136 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.55□□□□□ -0.562e-7■■■■□ 24.7
PLEC-202ENST00000345136 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.33□□□□□ -0.446e-7■■■■□ 24.6
PLEC-202ENST00000345136 RBFOX2O43251 390 aaKnown RBP eCLIP10.62□□□□□ -0.716e-7■■■■□ 24.5
PLEC-202ENST00000345136 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.12□□□□□ -0.153e-7■■■■□ 24.2
PLEC-202ENST00000345136 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.45□□□□□ -0.583e-6■■■■□ 23.9
PLEC-202ENST00000345136 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.85□□□□□ -0.675e-7■■■■□ 23.3
PLEC-202ENST00000345136 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.18□□□□□ -0.461e-9■■■■□ 21.9
PLEC-202ENST00000345136 DDX6P26196 483 aaKnown RBP eCLIP11.89□□□□□ -0.517e-7■■■■□ 21.6
PLEC-202ENST00000345136 IGF2BP3O00425 579 aaKnown RBP eCLIP12.53□□□□□ -0.45e-7■■■■□ 21.3
PLEC-202ENST00000345136 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.09□□□□□ -0.152e-6■■■■□ 21.1
PLEC-202ENST00000345136 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.42□□□□□ -0.423e-6■■■■□ 20.9
PLEC-202ENST00000345136 SMNDC1O75940 238 aaKnown RBP eCLIP12.3□□□□□ -0.442e-7■■■■□ 20.5
PLEC-202ENST00000345136 PCBP1Q15365 356 aaKnown RBP eCLIP11.99□□□□□ -0.491e-6■■■■□ 20
PLEC-202ENST00000345136 TIA1P31483 386 aaKnown RBP eCLIP11.41□□□□□ -0.585e-6■■■■□ 19.8
PLEC-202ENST00000345136 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.81□□□□□ -0.26e-7■■■□□ 19.2
PLEC-202ENST00000345136 RBM22Q9NW64 420 aaKnown RBP eCLIP12.12□□□□□ -0.471e-8■■■□□ 18.9
PLEC-202ENST00000345136 SF3A3Q12874 501 aaKnown RBP eCLIP13.02□□□□□ -0.337e-7■■■□□ 18.7
PLEC-202ENST00000345136 PRPF4O43172 522 aaKnown RBP eCLIP12.65□□□□□ -0.382e-6■■■□□ 18.5
PLEC-202ENST00000345136 RPS3P23396 243 aaKnown RBP eCLIP11.73□□□□□ -0.531e-6■■■□□ 18.5
PLEC-202ENST00000345136 TROVE2P10155 538 aaKnown RBP eCLIP13.38□□□□□ -0.276e-7■■■□□ 17.7
PLEC-202ENST00000345136 PUM1Q14671 1186 aaKnown RBP eCLIP11.81□□□□□ -0.524e-7■■■□□ 17.4
PLEC-202ENST00000345136 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.68□□□□□ -0.544e-6■■■□□ 17.3
PLEC-202ENST00000345136 PTBP1P26599 531 aaKnown RBP eCLIP11.24□□□□□ -0.614e-9■■■□□ 17
PLEC-202ENST00000345136 FKBP4Q02790 459 aaKnown RBP eCLIP13.79□□□□□ -0.22e-6■■■□□ 17
PLEC-202ENST00000345136 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.97□□□□□ -0.491e-8■■■□□ 16.9
PLEC-202ENST00000345136 METAP2P50579 478 aaKnown RBP eCLIP13.54□□□□□ -0.241e-6■■■□□ 16.5
PLEC-202ENST00000345136 PCBP2Q15366 365 aaKnown RBP eCLIP11.4□□□□□ -0.589e-7■■■□□ 15.8
PLEC-202ENST00000345136 G3BP1Q13283 466 aaKnown RBP eCLIP14.39□□□□□ -0.111e-6■■■□□ 15.6
PLEC-202ENST00000345136 NOLC1Q14978 699 aaKnown RBP eCLIP13.61□□□□□ -0.235e-6■■■□□ 15.4
PLEC-202ENST00000345136 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.31□□□□□ -0.443e-6■■■□□ 15.3
PLEC-202ENST00000345136 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.69□□□□□ -0.063e-6■■■□□ 15.1
PLEC-202ENST00000345136 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.87□□□□□ -0.512e-7■■■□□ 14.8
PLEC-202ENST00000345136 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.62□□□□□ -0.236e-9■■□□□ 14.5
PLEC-202ENST00000345136 TRA2AQ13595 282 aaKnown RBP eCLIP10.6□□□□□ -0.717e-7■■□□□ 13.5
PLEC-202ENST00000345136 PPIGQ13427 754 aaKnown RBP eCLIP11.51□□□□□ -0.576e-7■■□□□ 13.2
PLEC-202ENST00000345136 CDC40O60508 579 aaKnown RBP eCLIP12.37□□□□□ -0.436e-6■■□□□ 13.2
PLEC-202ENST00000345136 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.94□□□□□ -0.52e-6■■□□□ 13
PLEC-202ENST00000345136 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.27□□□□□ -0.284e-9■■□□□ 12.7
PLEC-202ENST00000345136 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.7□□□□□ -0.389e-7■■□□□ 12.5
PLEC-202ENST00000345136 SRSF1Q07955 248 aaKnown RBP eCLIP10.31□□□□□ -0.761e-6■■□□□ 12.3
PLEC-202ENST00000345136 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.09□□□□□ -0.311e-7■■□□□ 12.2
PLEC-202ENST00000345136 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.82□□□□□ -0.363e-6■■□□□ 12.2
PLEC-202ENST00000345136 NIPBLQ6KC79 2804 aaeCLIP6.88□□□□□ -1.312e-6■■□□□ 12
PLEC-202ENST00000345136 ZNF622Q969S3 477 aaKnown RBP eCLIP13.14□□□□□ -0.313e-6■■□□□ 11.7
PLEC-202ENST00000345136 RBM15Q96T37 977 aaKnown RBP eCLIP12.52□□□□□ -0.413e-6■□□□□ 11.2
PLEC-202ENST00000345136 YBX3P16989 372 aaKnown RBP eCLIP12.03□□□□□ -0.481e-6■□□□□ 11.1
PLEC-202ENST00000345136 SRSF9Q13242 221 aaKnown RBP eCLIP10.89□□□□□ -0.674e-8■□□□□ 10.8
PLEC-202ENST00000345136 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.78□□□□□ -0.525e-7■□□□□ 10.8
PLEC-202ENST00000345136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.33■□□□□ 0.056e-9■□□□□ 10.3
PLEC-202ENST00000345136 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.23□□□□□ -0.615e-6■□□□□ 9.9
PLEC-202ENST00000345136 DDX3XO00571 662 aaKnown RBP eCLIP12.01□□□□□ -0.497e-6■□□□□ 9.8
PLEC-202ENST00000345136 NKRFO15226 690 aaKnown RBP eCLIP12.02□□□□□ -0.493e-6■□□□□ 9.6
PLEC-202ENST00000345136 FTOQ9C0B1 505 aaKnown RBP eCLIP12.75□□□□□ -0.373e-9■□□□□ 9.1
PLEC-202ENST00000345136 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.07□□□□□ -0.322e-9■□□□□ 9
PLEC-202ENST00000345136 LARP4Q71RC2 724 aaKnown RBP eCLIP11.29□□□□□ -0.68e-7■□□□□ 8.5
PLEC-202ENST00000345136 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.1□□□□□ -0.474e-6■□□□□ 8.2
Retrieved 82 of 82 RNA–protein pairs in 11.8 ms