RNA–Protein interactions for RNA: ENST00000344191.8

AFDN-201, Transcript of afadin, adherens junction formation factor, humanhuman

TSL 5 BASIC

Gene AFDN, Length 5,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFDN-201ENST00000344191 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.43■■□□□ 1.822e-6■■■■■ 78.3
AFDN-201ENST00000344191 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.94■■□□□ 1.581e-12■■■■■ 50.8
AFDN-201ENST00000344191 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.74■■□□□ 1.392e-11■■■■■ 37.6
AFDN-201ENST00000344191 SF3B1O75533 1304 aaKnown RBP eCLIP23.14■■□□□ 1.33e-6■■■■■ 37.5
AFDN-201ENST00000344191 CSTF2P33240 577 aaKnown RBP eCLIP22.64■■□□□ 1.215e-12■■■■■ 37.1
AFDN-201ENST00000344191 EFTUD2Q15029 972 aaKnown RBP eCLIP24.39■■□□□ 1.493e-7■■■■■ 33.5
AFDN-201ENST00000344191 SF3B4Q15427 424 aaKnown RBP eCLIP21.9■■□□□ 1.11e-7■■■■■ 33.5
AFDN-201ENST00000344191 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP21.26■□□□□ 0.992e-7■■■■■ 31.4
AFDN-201ENST00000344191 LARP4Q71RC2 724 aaKnown RBP eCLIP22.28■■□□□ 1.169e-6■■■■■ 29.6
AFDN-201ENST00000344191 RBM22Q9NW64 420 aaKnown RBP eCLIP23.54■■□□□ 1.361e-6■■■■■ 28.1
AFDN-201ENST00000344191 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.84■■□□□ 1.572e-10■■■■■ 27.6
AFDN-201ENST00000344191 RBFOX2O43251 390 aaKnown RBP eCLIP19.46■□□□□ 0.712e-7■■■■■ 27.3
AFDN-201ENST00000344191 U2AF2P26368 475 aaKnown RBP eCLIP26.5■■□□□ 1.832e-8■■■■■ 27.2
AFDN-201ENST00000344191 HNRNPMP52272 730 aaKnown RBP eCLIP28.73■■■□□ 2.195e-7■■■■■ 27.1
AFDN-201ENST00000344191 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.28■■□□□ 1.486e-6■■■■□ 25.8
AFDN-201ENST00000344191 WRNQ14191 1432 aaPredicted RBP eCLIP30.65■■■□□ 2.53e-7■■■■□ 25.1
AFDN-201ENST00000344191 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.05■□□□□ 0.487e-7■■■■□ 22.9
AFDN-201ENST00000344191 QKIQ96PU8 341 aaKnown RBP eCLIP23.2■■□□□ 1.314e-7■■■■□ 22.9
AFDN-201ENST00000344191 AQRO60306 1485 aaKnown RBP eCLIP27.62■■■□□ 2.018e-7■■■■□ 22
AFDN-201ENST00000344191 MATR3P43243 847 aaKnown RBP eCLIP26.45■■□□□ 1.821e-6■■■■□ 22
AFDN-201ENST00000344191 RBM5P52756 815 aaKnown RBP eCLIP26.12■■□□□ 1.774e-6■■■■□ 21.7
AFDN-201ENST00000344191 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.42■■□□□ 1.822e-6■■■■□ 21.4
AFDN-201ENST00000344191 RBM15Q96T37 977 aaKnown RBP eCLIP24.54■■□□□ 1.521e-11■■■■□ 21.1
AFDN-201ENST00000344191 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.81■■□□□ 1.246e-9■■■■□ 20.1
AFDN-201ENST00000344191 HNRNPLP14866 589 aaKnown RBP eCLIP23.34■■□□□ 1.332e-6■■■■□ 19.8
AFDN-201ENST00000344191 SRSF1Q07955 248 aaKnown RBP eCLIP19.03■□□□□ 0.645e-7■■■■□ 19.6
AFDN-201ENST00000344191 DDX3XO00571 662 aaKnown RBP eCLIP24.07■■□□□ 1.444e-39■■■■□ 19.3
AFDN-201ENST00000344191 SRSF9Q13242 221 aaKnown RBP eCLIP19.73■□□□□ 0.754e-7■■■■□ 19.3
AFDN-201ENST00000344191 TAF15Q92804 592 aaKnown RBP eCLIP20.05■□□□□ 0.81e-5■■■□□ 19
AFDN-201ENST00000344191 GTF2F1P35269 517 aaKnown RBP eCLIP26.95■■□□□ 1.92e-13■■■□□ 18.7
AFDN-201ENST00000344191 PCBP2Q15366 365 aaKnown RBP eCLIP22.2■■□□□ 1.141e-6■■■□□ 18.7
AFDN-201ENST00000344191 HNRNPCP07910 306 aaKnown RBP eCLIP24.47■■□□□ 1.512e-6■■■□□ 18.2
AFDN-201ENST00000344191 U2AF1Q01081 240 aaKnown RBP eCLIP29.08■■■□□ 2.255e-9■■■□□ 18
AFDN-201ENST00000344191 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.82■■□□□ 1.082e-7■■■□□ 17.5
AFDN-201ENST00000344191 PTBP1P26599 531 aaKnown RBP eCLIP21.7■■□□□ 1.061e-8■■■□□ 17.5
AFDN-201ENST00000344191 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.53■■□□□ 1.846e-8■■■□□ 17.4
AFDN-201ENST00000344191 PUM1Q14671 1186 aaKnown RBP eCLIP22.19■■□□□ 1.143e-7■■■□□ 16.9
AFDN-201ENST00000344191 TIAL1Q01085 375 aaKnown RBP eCLIP21■□□□□ 0.954e-6■■■□□ 16.3
AFDN-201ENST00000344191 FMR1Q06787 632 aaKnown RBP eCLIP24.97■■□□□ 1.591e-6■■■□□ 16.3
AFDN-201ENST00000344191 SFPQP23246 707 aaKnown RBP eCLIP27.21■■□□□ 1.954e-7■■■□□ 16.2
AFDN-201ENST00000344191 KHSRPQ92945 711 aaKnown RBP eCLIP21.84■■□□□ 1.094e-7■■■□□ 15.2
AFDN-201ENST00000344191 HNRNPKP61978 463 aaKnown RBP eCLIP21.24■□□□□ 0.994e-10■■■□□ 15
AFDN-201ENST00000344191 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.69■■□□□ 1.75e-7■■■□□ 14.9
AFDN-201ENST00000344191 PRPF4O43172 522 aaKnown RBP eCLIP23.64■■□□□ 1.381e-7■■■□□ 14.8
AFDN-201ENST00000344191 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.95■■□□□ 1.589e-10■■□□□ 14.5
AFDN-201ENST00000344191 YWHAGP61981 247 aaKnown RBP eCLIP25.02■■□□□ 1.62e-6■■□□□ 14.3
AFDN-201ENST00000344191 TARDBPQ13148 414 aaKnown RBP eCLIP22.62■■□□□ 1.211e-6■■□□□ 14
AFDN-201ENST00000344191 SMNDC1O75940 238 aaKnown RBP eCLIP23.78■■□□□ 1.44e-8■■□□□ 14
AFDN-201ENST00000344191 SF3A3Q12874 501 aaKnown RBP eCLIP25.55■■□□□ 1.682e-7■■□□□ 13.8
AFDN-201ENST00000344191 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.32■■□□□ 1.643e-10■■□□□ 13.6
AFDN-201ENST00000344191 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.13■■■□□ 2.094e-6■■□□□ 13.5
AFDN-201ENST00000344191 TIA1P31483 386 aaKnown RBP eCLIP22.23■■□□□ 1.156e-7■■□□□ 13.5
AFDN-201ENST00000344191 NONOQ15233 471 aaKnown RBP eCLIP25.65■■□□□ 1.72e-6■■□□□ 13.5
AFDN-201ENST00000344191 FXR1P51114 621 aaKnown RBP eCLIP24.92■■□□□ 1.582e-6■■□□□ 13.4
AFDN-201ENST00000344191 BCCIPQ9P287 314 aaKnown RBP eCLIP26.49■■□□□ 1.837e-7■■□□□ 13.4
AFDN-201ENST00000344191 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.31■■■□□ 2.124e-7■■□□□ 13.3
AFDN-201ENST00000344191 TRA2AQ13595 282 aaKnown RBP eCLIP20.11■□□□□ 0.813e-8■■□□□ 13.1
AFDN-201ENST00000344191 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.35■■■□□ 2.455e-9■■□□□ 13.1
AFDN-201ENST00000344191 HLTFQ14527 1009 aaKnown RBP eCLIP26.5■■□□□ 1.832e-6■■□□□ 13
AFDN-201ENST00000344191 NCBP2P52298 156 aaKnown RBP eCLIP22.39■■□□□ 1.174e-12■■□□□ 13
AFDN-201ENST00000344191 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.1■■□□□ 1.932e-7■■□□□ 12.9
AFDN-201ENST00000344191 NOL12Q9UGY1 213 aaKnown RBP eCLIP26.68■■□□□ 1.862e-6■■□□□ 12.9
AFDN-201ENST00000344191 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.18■■□□□ 1.622e-10■■□□□ 12.7
AFDN-201ENST00000344191 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.42■■□□□ 1.027e-8■■□□□ 12.7
AFDN-201ENST00000344191 FXR2P51116 673 aaKnown RBP eCLIP24.43■■□□□ 1.56e-7■■□□□ 12.6
AFDN-201ENST00000344191 EIF3HO15372 352 aaKnown RBP eCLIP24.99■■□□□ 1.597e-7■■□□□ 12.3
AFDN-201ENST00000344191 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.89■■□□□ 1.254e-11■■□□□ 12
AFDN-201ENST00000344191 DDX59Q5T1V6 619 aaKnown RBP eCLIP22.7■■□□□ 1.228e-7■■□□□ 11.8
AFDN-201ENST00000344191 ZNF622Q969S3 477 aaKnown RBP eCLIP25.33■■□□□ 1.655e-8■■□□□ 11.7
AFDN-201ENST00000344191 FUSP35637 526 aaKnown RBP eCLIP17.38■□□□□ 0.372e-6■■□□□ 11.6
AFDN-201ENST00000344191 NKRFO15226 690 aaKnown RBP eCLIP23.17■■□□□ 1.39e-10■■□□□ 11.5
AFDN-201ENST00000344191 PPIGQ13427 754 aaKnown RBP eCLIP22.33■■□□□ 1.172e-8■□□□□ 11.3
AFDN-201ENST00000344191 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.05■■□□□ 1.124e-6■□□□□ 11
AFDN-201ENST00000344191 RPS3P23396 243 aaKnown RBP eCLIP22.46■■□□□ 1.197e-7■□□□□ 11
AFDN-201ENST00000344191 FTOQ9C0B1 505 aaKnown RBP eCLIP25.61■■□□□ 1.697e-9■□□□□ 9.1
AFDN-201ENST00000344191 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.84■■□□□ 1.413e-8■□□□□ 9.1
AFDN-201ENST00000344191 DDX42Q86XP3 938 aaKnown RBP eCLIP24.61■■□□□ 1.536e-7■□□□□ 8.7
AFDN-201ENST00000344191 GPKOWQ92917 476 aaPredicted RBP eCLIP25.34■■□□□ 1.654e-7■□□□□ 8.4
AFDN-201ENST00000344191 EIF3DO15371 548 aaKnown RBP eCLIP24.36■■□□□ 1.498e-9■□□□□ 8.2
AFDN-201ENST00000344191 YBX3P16989 372 aaKnown RBP eCLIP23.44■■□□□ 1.343e-6■□□□□ 8.2
AFDN-201ENST00000344191 TROVE2P10155 538 aaKnown RBP eCLIP25.41■■□□□ 1.662e-9■□□□□ 8
AFDN-201ENST00000344191 SAFBQ15424 915 aaKnown RBP eCLIP27.58■■■□□ 2.015e-6■□□□□ 8
Retrieved 82 of 82 RNA–protein pairs in 893.4 ms