RNA–Protein interactions for RNA: ENST00000343631.3

EXT2-201, Transcript of exostosin glycosyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT2, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT2-201ENST00000343631 NISCHQ9Y2I1 1504 aa24.85■■□□□ 1.57
EXT2-201ENST00000343631 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.04
EXT2-201ENST00000343631 DCAF8L2P0C7V8 631 aa21.22■□□□□ 0.99
EXT2-201ENST00000343631 SUPT5HO00267 1087 aaKnown RBP21.1■□□□□ 0.97
EXT2-201ENST00000343631 CCDC180Q9P1Z9 1646 aa21■□□□□ 0.95
EXT2-201ENST00000343631 ZCCHC6Q5VYS8 1495 aaKnown RBP20.96■□□□□ 0.95
EXT2-201ENST00000343631 CHIC1Q5VXU3 224 aa20.22■□□□□ 0.83
EXT2-201ENST00000343631 DCAF1Q9Y4B6 1507 aa20.18■□□□□ 0.82
EXT2-201ENST00000343631 MYO15BQ96JP2 1530 aa20.1■□□□□ 0.81
EXT2-201ENST00000343631 ABCC9O60706 1549 aa20.01■□□□□ 0.79
EXT2-201ENST00000343631 SCRIBQ14160 1630 aa20■□□□□ 0.79
EXT2-201ENST00000343631 LOC105371045A0A1W2PR82 267 aa19.79■□□□□ 0.76
EXT2-201ENST00000343631 RSF1Q96T23 1441 aaPredicted RBP19.7■□□□□ 0.74
EXT2-201ENST00000343631 PCGF6Q9BYE7 350 aa19.66■□□□□ 0.74
EXT2-201ENST00000343631 EHMT2Q96KQ7 1210 aa19.6■□□□□ 0.73
EXT2-201ENST00000343631 FAM9AQ8IZU1 332 aaPredicted RBP19.59■□□□□ 0.73
EXT2-201ENST00000343631 CECR2Q9BXF3 1484 aa19.55■□□□□ 0.72
EXT2-201ENST00000343631 NACADO15069 1562 aa19.54■□□□□ 0.72
EXT2-201ENST00000343631 TRIM41Q8WV44 630 aa19.54■□□□□ 0.72
EXT2-201ENST00000343631 RB1CC1Q8TDY2 1594 aa19.51■□□□□ 0.71
EXT2-201ENST00000343631 MROH2BQ7Z745 1585 aa19.41■□□□□ 0.7
EXT2-201ENST00000343631 HRCP23327 699 aa19.38■□□□□ 0.69
EXT2-201ENST00000343631 WIZO95785 1651 aa19.29■□□□□ 0.68
EXT2-201ENST00000343631 PABPN1Q86U42 306 aaKnown RBP eCLIP19.24■□□□□ 0.67
EXT2-201ENST00000343631 PPARGC1BQ86YN6 1023 aaKnown RBP19.23■□□□□ 0.67
EXT2-201ENST00000343631 TRIM26Q12899 539 aaPredicted RBP19.12■□□□□ 0.65
EXT2-201ENST00000343631 BAZ1AQ9NRL2 1556 aaPredicted RBP19.09■□□□□ 0.65
EXT2-201ENST00000343631 UNC13AQ9UPW8 1703 aa18.95■□□□□ 0.62
EXT2-201ENST00000343631 SMARCA4P51532 1647 aa18.94■□□□□ 0.62
EXT2-201ENST00000343631 ABCC8Q09428 1581 aa18.92■□□□□ 0.62
EXT2-201ENST00000343631 CCDC88BA6NC98 1476 aa18.91■□□□□ 0.62
EXT2-201ENST00000343631 TTBK1Q5TCY1 1321 aaPredicted RBP18.9■□□□□ 0.62
EXT2-201ENST00000343631 TOP2AP11388 1531 aaKnown RBP18.89■□□□□ 0.61
EXT2-201ENST00000343631 SMARCA2P51531 1590 aa18.81■□□□□ 0.6
EXT2-201ENST00000343631 EIF4G1Q04637 1599 aaKnown RBP18.78■□□□□ 0.6
EXT2-201ENST00000343631 BICRAQ9NZM4 1560 aa18.77■□□□□ 0.6
EXT2-201ENST00000343631 SOGA1O94964 1423 aa18.73■□□□□ 0.59
EXT2-201ENST00000343631 UBTFP17480 764 aaKnown RBP18.71■□□□□ 0.59
EXT2-201ENST00000343631 RUSC2Q8N2Y8 1516 aa18.64■□□□□ 0.57
EXT2-201ENST00000343631 CSRNP3Q8WYN3 585 aa18.61■□□□□ 0.57
EXT2-201ENST00000343631 RANGAP1P46060 587 aaPredicted RBP18.6■□□□□ 0.57
EXT2-201ENST00000343631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.58■□□□□ 0.56
EXT2-201ENST00000343631 ZEB1P37275 1124 aaPredicted RBP18.56■□□□□ 0.56
EXT2-201ENST00000343631 WRNQ14191 1432 aaPredicted RBP eCLIP18.56■□□□□ 0.56
EXT2-201ENST00000343631 BAZ1BQ9UIG0 1483 aaKnown RBP18.55■□□□□ 0.56
EXT2-201ENST00000343631 ATAD2BQ9ULI0 1458 aa18.55■□□□□ 0.56
EXT2-201ENST00000343631 CEP162Q5TB80 1403 aa18.55■□□□□ 0.56
EXT2-201ENST00000343631 CCER1Q8TC90 406 aaPredicted RBP18.5■□□□□ 0.55
EXT2-201ENST00000343631 TNIKQ9UKE5 1360 aa18.43■□□□□ 0.54
EXT2-201ENST00000343631 PEG3Q9GZU2 1588 aa18.42■□□□□ 0.54
EXT2-201ENST00000343631 SYNJ1O43426 1573 aa18.42■□□□□ 0.54
EXT2-201ENST00000343631 EEA1Q15075 1411 aa18.39■□□□□ 0.53
EXT2-201ENST00000343631 PELP1Q8IZL8 1130 aaKnown RBP18.39■□□□□ 0.53
EXT2-201ENST00000343631 GOLGA3Q08378 1498 aa18.38■□□□□ 0.53
EXT2-201ENST00000343631 CEP164Q9UPV0 1460 aa18.27■□□□□ 0.51
EXT2-201ENST00000343631 HNRNPUL2Q1KMD3 747 aaKnown RBP18.27■□□□□ 0.51
EXT2-201ENST00000343631 CLIP1P30622 1438 aa18.25■□□□□ 0.51
EXT2-201ENST00000343631 RAPGEF2Q9Y4G8 1499 aa18.24■□□□□ 0.51
EXT2-201ENST00000343631 APLP2Q06481 763 aa18.24■□□□□ 0.51
EXT2-201ENST00000343631 NCAPD3P42695 1498 aa18.13■□□□□ 0.49
EXT2-201ENST00000343631 KIF21BO75037 1637 aa18.12■□□□□ 0.49
EXT2-201ENST00000343631 TOP2BQ02880 1626 aa18.1■□□□□ 0.49
EXT2-201ENST00000343631 VPS8Q8N3P4 1428 aa18.07■□□□□ 0.48
EXT2-201ENST00000343631 HMGXB3Q12766 1538 aa18.06■□□□□ 0.48
EXT2-201ENST00000343631 CUX1P39880 1505 aa18.05■□□□□ 0.48
EXT2-201ENST00000343631 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
EXT2-201ENST00000343631 KIF27Q86VH2 1401 aa17.98■□□□□ 0.47
EXT2-201ENST00000343631 CFTRP13569 1480 aa17.98■□□□□ 0.47
EXT2-201ENST00000343631 BIVM-ERCC5R4GMW8 1640 aa17.98■□□□□ 0.47
EXT2-201ENST00000343631 DIEXFQ68CQ4 756 aaKnown RBP17.98■□□□□ 0.47
EXT2-201ENST00000343631 KANK4Q5T7N3 995 aaPredicted RBP17.94■□□□□ 0.46
EXT2-201ENST00000343631 PRXQ9BXM0 1461 aa17.93■□□□□ 0.46
EXT2-201ENST00000343631 ITGAEP38570 1179 aa17.92■□□□□ 0.46
EXT2-201ENST00000343631 CUX2O14529 1486 aa17.91■□□□□ 0.46
EXT2-201ENST00000343631 CADPSQ9ULU8 1353 aa17.88■□□□□ 0.45
EXT2-201ENST00000343631 ATP1B4Q9UN42 357 aaPredicted RBP17.88■□□□□ 0.45
EXT2-201ENST00000343631 ARAP1Q96P48 1450 aa17.88■□□□□ 0.45
EXT2-201ENST00000343631 P3H3Q8IVL6 736 aa17.87■□□□□ 0.45
EXT2-201ENST00000343631 ERICH3Q5RHP9 1530 aa17.85■□□□□ 0.45
EXT2-201ENST00000343631 CC2D2AQ9P2K1 1620 aa17.83■□□□□ 0.45
EXT2-201ENST00000343631 ZNF316A6NFI3 1004 aaPredicted RBP17.82■□□□□ 0.44
EXT2-201ENST00000343631 FGD5Q6ZNL6 1462 aa17.8■□□□□ 0.44
EXT2-201ENST00000343631 IGF1RP08069 1367 aa17.79■□□□□ 0.44
EXT2-201ENST00000343631 YTHDC1Q96MU7 727 aaKnown RBP17.79■□□□□ 0.44
EXT2-201ENST00000343631 CARMIL1Q5VZK9 1371 aa17.77■□□□□ 0.43
EXT2-201ENST00000343631 ARHGAP35Q9NRY4 1499 aa17.76■□□□□ 0.43
EXT2-201ENST00000343631 NESP48681 1621 aa17.75■□□□□ 0.43
EXT2-201ENST00000343631 NEUROD1Q13562 356 aa17.75■□□□□ 0.43
EXT2-201ENST00000343631 FANCD2Q9BXW9 1451 aa17.74■□□□□ 0.43
EXT2-201ENST00000343631 RAD54L2Q9Y4B4 1467 aa17.72■□□□□ 0.43
EXT2-201ENST00000343631 DNAJC5BQ9UF47 199 aa17.69■□□□□ 0.42
EXT2-201ENST00000343631 MYT1Q01538 1121 aa17.68■□□□□ 0.42
EXT2-201ENST00000343631 ACIN1Q9UKV3 1341 aaKnown RBP17.68■□□□□ 0.42
EXT2-201ENST00000343631 FAM50AQ14320 339 aaKnown RBP17.65■□□□□ 0.42
EXT2-201ENST00000343631 CENPBP07199 599 aaPredicted RBP17.64■□□□□ 0.41
EXT2-201ENST00000343631 CCNB3Q8WWL7 1395 aa17.63■□□□□ 0.41
EXT2-201ENST00000343631 MIER1Q8N108 512 aa17.63■□□□□ 0.41
EXT2-201ENST00000343631 PRDM2Q13029 1718 aa17.63■□□□□ 0.41
EXT2-201ENST00000343631 DHX57Q6P158 1386 aaKnown RBP17.62■□□□□ 0.41
EXT2-201ENST00000343631 FHOD3Q2V2M9 1422 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms