RNA–Protein interactions for RNA: ENST00000342945.9

BCAT1-202, Transcript of branched chain amino acid transaminase 1, humanhuman

TSL 2 BASIC

Gene BCAT1, Length 4,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAT1-202ENST00000342945 NISCHQ9Y2I1 1504 aa15.36■□□□□ 0.05
BCAT1-202ENST00000342945 SHROOM4Q9ULL8 1493 aa14.34□□□□□ -0.11
BCAT1-202ENST00000342945 SUPT5HO00267 1087 aaKnown RBP14.26□□□□□ -0.13
BCAT1-202ENST00000342945 DCAF8L2P0C7V8 631 aa14.22□□□□□ -0.13
BCAT1-202ENST00000342945 PCGF6Q9BYE7 350 aa13.62□□□□□ -0.23
BCAT1-202ENST00000342945 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
BCAT1-202ENST00000342945 PPARGC1BQ86YN6 1023 aaKnown RBP13.39□□□□□ -0.27
BCAT1-202ENST00000342945 CHIC1Q5VXU3 224 aa13.37□□□□□ -0.27
BCAT1-202ENST00000342945 FAM9AQ8IZU1 332 aaPredicted RBP13.35□□□□□ -0.27
BCAT1-202ENST00000342945 LOC105371045A0A1W2PR82 267 aa13.35□□□□□ -0.27
BCAT1-202ENST00000342945 HRCP23327 699 aa13.29□□□□□ -0.28
BCAT1-202ENST00000342945 TTBK1Q5TCY1 1321 aaPredicted RBP13.14□□□□□ -0.31
BCAT1-202ENST00000342945 MYO15BQ96JP2 1530 aa13.12□□□□□ -0.31
BCAT1-202ENST00000342945 TRIM41Q8WV44 630 aa13.02□□□□□ -0.32
BCAT1-202ENST00000342945 TRIM26Q12899 539 aaPredicted RBP12.92□□□□□ -0.34
BCAT1-202ENST00000342945 ZCCHC6Q5VYS8 1495 aaKnown RBP12.9□□□□□ -0.34
BCAT1-202ENST00000342945 CCER1Q8TC90 406 aaPredicted RBP12.77□□□□□ -0.37
BCAT1-202ENST00000342945 RANGAP1P46060 587 aaPredicted RBP12.74□□□□□ -0.37
BCAT1-202ENST00000342945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.73□□□□□ -0.37
BCAT1-202ENST00000342945 ZEB1P37275 1124 aaPredicted RBP12.68□□□□□ -0.38
BCAT1-202ENST00000342945 YTHDC1Q96MU7 727 aaKnown RBP12.63□□□□□ -0.39
BCAT1-202ENST00000342945 UBTFP17480 764 aaKnown RBP12.58□□□□□ -0.39
BCAT1-202ENST00000342945 DCAF1Q9Y4B6 1507 aa12.57□□□□□ -0.4
BCAT1-202ENST00000342945 ABCC9O60706 1549 aa12.51□□□□□ -0.41
BCAT1-202ENST00000342945 SCRIBQ14160 1630 aa12.51□□□□□ -0.41
BCAT1-202ENST00000342945 CCDC180Q9P1Z9 1646 aa12.51□□□□□ -0.41
BCAT1-202ENST00000342945 HNRNPUL2Q1KMD3 747 aaKnown RBP12.47□□□□□ -0.41
BCAT1-202ENST00000342945 SCAF1Q9H7N4 1312 aaKnown RBP12.46□□□□□ -0.41
BCAT1-202ENST00000342945 DIEXFQ68CQ4 756 aaKnown RBP12.42□□□□□ -0.42
BCAT1-202ENST00000342945 CENPBP07199 599 aaPredicted RBP12.42□□□□□ -0.42
BCAT1-202ENST00000342945 RSF1Q96T23 1441 aaPredicted RBP12.41□□□□□ -0.42
BCAT1-202ENST00000342945 APLP2Q06481 763 aa12.4□□□□□ -0.42
BCAT1-202ENST00000342945 GTF3C3Q9Y5Q9 886 aa12.38□□□□□ -0.43
BCAT1-202ENST00000342945 NEUROD1Q13562 356 aa12.35□□□□□ -0.43
BCAT1-202ENST00000342945 PABPN1Q86U42 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
BCAT1-202ENST00000342945 PELP1Q8IZL8 1130 aaKnown RBP12.31□□□□□ -0.44
BCAT1-202ENST00000342945 ITGAEP38570 1179 aa12.28□□□□□ -0.44
BCAT1-202ENST00000342945 RB1CC1Q8TDY2 1594 aa12.28□□□□□ -0.44
BCAT1-202ENST00000342945 ACIN1Q9UKV3 1341 aaKnown RBP12.28□□□□□ -0.44
BCAT1-202ENST00000342945 CECR2Q9BXF3 1484 aa12.27□□□□□ -0.45
BCAT1-202ENST00000342945 ATP1B4Q9UN42 357 aaPredicted RBP12.2□□□□□ -0.46
BCAT1-202ENST00000342945 CSRNP3Q8WYN3 585 aa12.16□□□□□ -0.46
BCAT1-202ENST00000342945 ZNF316A6NFI3 1004 aaPredicted RBP12.14□□□□□ -0.47
BCAT1-202ENST00000342945 MROH2BQ7Z745 1585 aa12.11□□□□□ -0.47
BCAT1-202ENST00000342945 MIER1Q8N108 512 aa12.09□□□□□ -0.47
BCAT1-202ENST00000342945 SOGA1O94964 1423 aa12.05□□□□□ -0.48
BCAT1-202ENST00000342945 CEP162Q5TB80 1403 aa12.05□□□□□ -0.48
BCAT1-202ENST00000342945 ABCC8Q09428 1581 aa12.04□□□□□ -0.48
BCAT1-202ENST00000342945 WIZO95785 1651 aa12.01□□□□□ -0.49
BCAT1-202ENST00000342945 BCANQ96GW7 911 aa12.01□□□□□ -0.49
BCAT1-202ENST00000342945 CCDC88BA6NC98 1476 aa12□□□□□ -0.49
BCAT1-202ENST00000342945 RUSC2Q8N2Y8 1516 aa11.94□□□□□ -0.5
BCAT1-202ENST00000342945 P3H3Q8IVL6 736 aa11.92□□□□□ -0.5
BCAT1-202ENST00000342945 CNGB1Q14028 1251 aaPredicted RBP11.9□□□□□ -0.5
BCAT1-202ENST00000342945 FAM50AQ14320 339 aaKnown RBP11.9□□□□□ -0.5
BCAT1-202ENST00000342945 HIRIP3Q9BW71 556 aaPredicted RBP11.88□□□□□ -0.51
BCAT1-202ENST00000342945 CLIP1P30622 1438 aa11.87□□□□□ -0.51
BCAT1-202ENST00000342945 TNIKQ9UKE5 1360 aa11.86□□□□□ -0.51
BCAT1-202ENST00000342945 NACADO15069 1562 aa11.82□□□□□ -0.52
BCAT1-202ENST00000342945 WRNQ14191 1432 aaPredicted RBP eCLIP11.81□□□□□ -0.52
BCAT1-202ENST00000342945 GOLGA3Q08378 1498 aa11.8□□□□□ -0.52
BCAT1-202ENST00000342945 BAZ1AQ9NRL2 1556 aaPredicted RBP11.79□□□□□ -0.52
BCAT1-202ENST00000342945 DDX10Q13206 875 aaKnown RBP11.79□□□□□ -0.52
BCAT1-202ENST00000342945 NEFLP07196 543 aa11.78□□□□□ -0.52
BCAT1-202ENST00000342945 KANK4Q5T7N3 995 aaPredicted RBP11.77□□□□□ -0.53
BCAT1-202ENST00000342945 TRIM52Q96A61 297 aa11.74□□□□□ -0.53
BCAT1-202ENST00000342945 ARID3CA6NKF2 412 aa11.73□□□□□ -0.53
BCAT1-202ENST00000342945 KCNH8Q96L42 1107 aa11.72□□□□□ -0.53
BCAT1-202ENST00000342945 FKBP8Q14318 412 aa11.71□□□□□ -0.53
BCAT1-202ENST00000342945 POLR3GLQ9BT43 218 aa11.71□□□□□ -0.53
BCAT1-202ENST00000342945 SIN3AQ96ST3 1273 aa11.69□□□□□ -0.54
BCAT1-202ENST00000342945 MYT1Q01538 1121 aa11.68□□□□□ -0.54
BCAT1-202ENST00000342945 EEA1Q15075 1411 aa11.67□□□□□ -0.54
BCAT1-202ENST00000342945 CEP164Q9UPV0 1460 aa11.67□□□□□ -0.54
BCAT1-202ENST00000342945 SUPT16HQ9Y5B9 1047 aaKnown RBP11.66□□□□□ -0.54
BCAT1-202ENST00000342945 RAPGEF2Q9Y4G8 1499 aa11.66□□□□□ -0.54
BCAT1-202ENST00000342945 TOP2AP11388 1531 aaKnown RBP11.66□□□□□ -0.54
BCAT1-202ENST00000342945 IRX6P78412 446 aaPredicted RBP11.65□□□□□ -0.54
BCAT1-202ENST00000342945 ERICH6Q7L0X2 663 aa11.64□□□□□ -0.55
BCAT1-202ENST00000342945 VPS8Q8N3P4 1428 aa11.63□□□□□ -0.55
BCAT1-202ENST00000342945 SENP3-EIF4A1A0A087X0R7 540 aa11.62□□□□□ -0.55
BCAT1-202ENST00000342945 SMARCA2P51531 1590 aa11.62□□□□□ -0.55
BCAT1-202ENST00000342945 ANP32CO43423 234 aa11.6□□□□□ -0.55
BCAT1-202ENST00000342945 SMARCA4P51532 1647 aa11.6□□□□□ -0.55
BCAT1-202ENST00000342945 BAZ1BQ9UIG0 1483 aaKnown RBP11.6□□□□□ -0.55
BCAT1-202ENST00000342945 CHIC2Q9UKJ5 165 aa11.58□□□□□ -0.56
BCAT1-202ENST00000342945 DHX57Q6P158 1386 aaKnown RBP11.55□□□□□ -0.56
BCAT1-202ENST00000342945 ZNF326Q5BKZ1 582 aaKnown RBP11.54□□□□□ -0.56
BCAT1-202ENST00000342945 HNRNPUQ00839 825 aaKnown RBP eCLIP11.54□□□□□ -0.56
BCAT1-202ENST00000342945 CCNB3Q8WWL7 1395 aa11.52□□□□□ -0.57
BCAT1-202ENST00000342945 TSHZ2Q9NRE2 1034 aa11.49□□□□□ -0.57
BCAT1-202ENST00000342945 SYNJ1O43426 1573 aa11.49□□□□□ -0.57
BCAT1-202ENST00000342945 TONSLQ96HA7 1378 aa11.48□□□□□ -0.57
BCAT1-202ENST00000342945 FAM9BQ8IZU0 186 aa11.48□□□□□ -0.57
BCAT1-202ENST00000342945 RAB3GAP2Q9H2M9 1393 aa11.48□□□□□ -0.57
BCAT1-202ENST00000342945 RRP7BPQ9NSQ0 103 aa11.48□□□□□ -0.57
BCAT1-202ENST00000342945 KIF27Q86VH2 1401 aa11.46□□□□□ -0.58
BCAT1-202ENST00000342945 ATAD2BQ9ULI0 1458 aa11.44□□□□□ -0.58
BCAT1-202ENST00000342945 KIF21BO75037 1637 aa11.44□□□□□ -0.58
BCAT1-202ENST00000342945 CUX2O14529 1486 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms