RNA–Protein interactions for RNA: ENST00000342756.9

SRP72-201, Transcript of signal recognition particle 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP72, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP72-201ENST00000342756 NISCHQ9Y2I1 1504 aa19.95■□□□□ 0.78
SRP72-201ENST00000342756 SUPT5HO00267 1087 aaKnown RBP18.87■□□□□ 0.61
SRP72-201ENST00000342756 DCAF8L2P0C7V8 631 aa18.82■□□□□ 0.6
SRP72-201ENST00000342756 SHROOM4Q9ULL8 1493 aa18.8■□□□□ 0.6
SRP72-201ENST00000342756 PCGF6Q9BYE7 350 aa18.15■□□□□ 0.5
SRP72-201ENST00000342756 EHMT2Q96KQ7 1210 aa17.97■□□□□ 0.47
SRP72-201ENST00000342756 HRCP23327 699 aa17.75■□□□□ 0.43
SRP72-201ENST00000342756 PPARGC1BQ86YN6 1023 aaKnown RBP17.69■□□□□ 0.42
SRP72-201ENST00000342756 FAM9AQ8IZU1 332 aaPredicted RBP17.67■□□□□ 0.42
SRP72-201ENST00000342756 CHIC1Q5VXU3 224 aa17.62■□□□□ 0.41
SRP72-201ENST00000342756 LOC105371045A0A1W2PR82 267 aa17.56■□□□□ 0.4
SRP72-201ENST00000342756 TTBK1Q5TCY1 1321 aaPredicted RBP17.4■□□□□ 0.38
SRP72-201ENST00000342756 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
SRP72-201ENST00000342756 TRIM26Q12899 539 aaPredicted RBP17.28■□□□□ 0.36
SRP72-201ENST00000342756 ZEB1P37275 1124 aaPredicted RBP17.19■□□□□ 0.34
SRP72-201ENST00000342756 CCER1Q8TC90 406 aaPredicted RBP17.13■□□□□ 0.33
SRP72-201ENST00000342756 MYO15BQ96JP2 1530 aa17.04■□□□□ 0.32
SRP72-201ENST00000342756 PELP1Q8IZL8 1130 aaKnown RBP16.99■□□□□ 0.31
SRP72-201ENST00000342756 YTHDC1Q96MU7 727 aaKnown RBP16.92■□□□□ 0.3
SRP72-201ENST00000342756 CENPBP07199 599 aaPredicted RBP16.92■□□□□ 0.3
SRP72-201ENST00000342756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.89■□□□□ 0.29
SRP72-201ENST00000342756 RANGAP1P46060 587 aaPredicted RBP16.87■□□□□ 0.29
SRP72-201ENST00000342756 CCDC180Q9P1Z9 1646 aa16.77■□□□□ 0.27
SRP72-201ENST00000342756 UBTFP17480 764 aaKnown RBP16.77■□□□□ 0.27
SRP72-201ENST00000342756 APLP2Q06481 763 aa16.74■□□□□ 0.27
SRP72-201ENST00000342756 ZCCHC6Q5VYS8 1495 aaKnown RBP16.73■□□□□ 0.27
SRP72-201ENST00000342756 DCAF1Q9Y4B6 1507 aa16.65■□□□□ 0.26
SRP72-201ENST00000342756 DIEXFQ68CQ4 756 aaKnown RBP16.65■□□□□ 0.26
SRP72-201ENST00000342756 GTF3C3Q9Y5Q9 886 aa16.6■□□□□ 0.25
SRP72-201ENST00000342756 SCAF1Q9H7N4 1312 aaKnown RBP16.59■□□□□ 0.25
SRP72-201ENST00000342756 HNRNPUL2Q1KMD3 747 aaKnown RBP16.57■□□□□ 0.24
SRP72-201ENST00000342756 ACIN1Q9UKV3 1341 aaKnown RBP16.49■□□□□ 0.23
SRP72-201ENST00000342756 NEUROD1Q13562 356 aa16.44■□□□□ 0.22
SRP72-201ENST00000342756 ITGAEP38570 1179 aa16.32■□□□□ 0.2
SRP72-201ENST00000342756 MYT1Q01538 1121 aa16.31■□□□□ 0.2
SRP72-201ENST00000342756 ZNF316A6NFI3 1004 aaPredicted RBP16.26■□□□□ 0.19
SRP72-201ENST00000342756 ATP1B4Q9UN42 357 aaPredicted RBP16.26■□□□□ 0.19
SRP72-201ENST00000342756 ABCC9O60706 1549 aa16.21■□□□□ 0.18
SRP72-201ENST00000342756 SCRIBQ14160 1630 aa16.2■□□□□ 0.18
SRP72-201ENST00000342756 RSF1Q96T23 1441 aaPredicted RBP16.16■□□□□ 0.18
SRP72-201ENST00000342756 CSRNP3Q8WYN3 585 aa16.09■□□□□ 0.17
SRP72-201ENST00000342756 BCANQ96GW7 911 aa16.08■□□□□ 0.16
SRP72-201ENST00000342756 NEFLP07196 543 aa16.07■□□□□ 0.16
SRP72-201ENST00000342756 PABPN1Q86U42 306 aaKnown RBP eCLIP16.06■□□□□ 0.16
SRP72-201ENST00000342756 MIER1Q8N108 512 aa16.06■□□□□ 0.16
SRP72-201ENST00000342756 ERICH6Q7L0X2 663 aa16■□□□□ 0.15
SRP72-201ENST00000342756 RB1CC1Q8TDY2 1594 aa15.89■□□□□ 0.13
SRP72-201ENST00000342756 CECR2Q9BXF3 1484 aa15.86■□□□□ 0.13
SRP72-201ENST00000342756 CNGB1Q14028 1251 aaPredicted RBP15.85■□□□□ 0.13
SRP72-201ENST00000342756 CEP162Q5TB80 1403 aa15.85■□□□□ 0.13
SRP72-201ENST00000342756 FAM50AQ14320 339 aaKnown RBP15.84■□□□□ 0.13
SRP72-201ENST00000342756 FKBP8Q14318 412 aa15.72■□□□□ 0.11
SRP72-201ENST00000342756 SOGA1O94964 1423 aa15.71■□□□□ 0.1
SRP72-201ENST00000342756 DDX10Q13206 875 aaKnown RBP15.7■□□□□ 0.1
SRP72-201ENST00000342756 POLR3GLQ9BT43 218 aa15.7■□□□□ 0.1
SRP72-201ENST00000342756 P3H3Q8IVL6 736 aa15.69■□□□□ 0.1
SRP72-201ENST00000342756 HIRIP3Q9BW71 556 aaPredicted RBP15.68■□□□□ 0.1
SRP72-201ENST00000342756 CLIP1P30622 1438 aa15.66■□□□□ 0.1
SRP72-201ENST00000342756 MROH2BQ7Z745 1585 aa15.66■□□□□ 0.1
SRP72-201ENST00000342756 TNIKQ9UKE5 1360 aa15.65■□□□□ 0.1
SRP72-201ENST00000342756 TRIM52Q96A61 297 aa15.65■□□□□ 0.1
SRP72-201ENST00000342756 ANP32CO43423 234 aa15.63■□□□□ 0.09
SRP72-201ENST00000342756 CCDC88BA6NC98 1476 aa15.62■□□□□ 0.09
SRP72-201ENST00000342756 ABCC8Q09428 1581 aa15.61■□□□□ 0.09
SRP72-201ENST00000342756 SUPT16HQ9Y5B9 1047 aaKnown RBP15.58■□□□□ 0.08
SRP72-201ENST00000342756 GOLGA3Q08378 1498 aa15.57■□□□□ 0.08
SRP72-201ENST00000342756 IRX6P78412 446 aaPredicted RBP15.51■□□□□ 0.07
SRP72-201ENST00000342756 WRNQ14191 1432 aaPredicted RBP eCLIP15.5■□□□□ 0.07
SRP72-201ENST00000342756 WIZO95785 1651 aa15.5■□□□□ 0.07
SRP72-201ENST00000342756 CLSPNQ9HAW4 1339 aa15.49■□□□□ 0.07
SRP72-201ENST00000342756 CDK11AQ9UQ88 783 aaPredicted RBP15.48■□□□□ 0.07
SRP72-201ENST00000342756 EEA1Q15075 1411 aa15.47■□□□□ 0.07
SRP72-201ENST00000342756 RUSC2Q8N2Y8 1516 aa15.46■□□□□ 0.07
SRP72-201ENST00000342756 HNRNPUQ00839 825 aaKnown RBP eCLIP15.46■□□□□ 0.06
SRP72-201ENST00000342756 SIN3AQ96ST3 1273 aa15.43■□□□□ 0.06
SRP72-201ENST00000342756 ARID3CA6NKF2 412 aa15.42■□□□□ 0.06
SRP72-201ENST00000342756 KANK4Q5T7N3 995 aaPredicted RBP15.42■□□□□ 0.06
SRP72-201ENST00000342756 KCNH8Q96L42 1107 aa15.41■□□□□ 0.06
SRP72-201ENST00000342756 ANP32EQ9BTT0 268 aa15.41■□□□□ 0.06
SRP72-201ENST00000342756 CEP164Q9UPV0 1460 aa15.4■□□□□ 0.06
SRP72-201ENST00000342756 BAZ1AQ9NRL2 1556 aaPredicted RBP15.39■□□□□ 0.05
SRP72-201ENST00000342756 ZNF326Q5BKZ1 582 aaKnown RBP15.38■□□□□ 0.05
SRP72-201ENST00000342756 NACADO15069 1562 aa15.37■□□□□ 0.05
SRP72-201ENST00000342756 TONSLQ96HA7 1378 aa15.36■□□□□ 0.05
SRP72-201ENST00000342756 FAM9BQ8IZU0 186 aa15.35■□□□□ 0.05
SRP72-201ENST00000342756 TSHZ2Q9NRE2 1034 aa15.35■□□□□ 0.05
SRP72-201ENST00000342756 VPS8Q8N3P4 1428 aa15.33■□□□□ 0.04
SRP72-201ENST00000342756 SENP3-EIF4A1A0A087X0R7 540 aa15.31■□□□□ 0.04
SRP72-201ENST00000342756 CHIC2Q9UKJ5 165 aa15.3■□□□□ 0.04
SRP72-201ENST00000342756 RTL5Q5HYW3 569 aaPredicted RBP15.29■□□□□ 0.04
SRP72-201ENST00000342756 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
SRP72-201ENST00000342756 NBR1Q14596 966 aa15.23■□□□□ 0.03
SRP72-201ENST00000342756 RBM19Q9Y4C8 960 aaKnown RBP15.22■□□□□ 0.03
SRP72-201ENST00000342756 DHX57Q6P158 1386 aaKnown RBP15.21■□□□□ 0.03
SRP72-201ENST00000342756 RAPGEF2Q9Y4G8 1499 aa15.21■□□□□ 0.03
SRP72-201ENST00000342756 NPM2Q86SE8 214 aaKnown RBP15.2■□□□□ 0.02
SRP72-201ENST00000342756 MRS2Q9HD23 443 aa15.18■□□□□ 0.02
SRP72-201ENST00000342756 DAXXQ9UER7 740 aaPredicted RBP15.18■□□□□ 0.02
SRP72-201ENST00000342756 RRP7BPQ9NSQ0 103 aa15.17■□□□□ 0.02
SRP72-201ENST00000342756 SALL2Q9Y467 1007 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms