RNA–Protein interactions for RNA: ENST00000342741.4

PKLR-201, Transcript of pyruvate kinase L/R, humanhuman

TSL 1 (best) BASIC

Gene PKLR, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKLR-201ENST00000342741 NISCHQ9Y2I1 1504 aa37.21■■■■□ 3.55
PKLR-201ENST00000342741 CCDC180Q9P1Z9 1646 aa32.29■■■□□ 2.76
PKLR-201ENST00000342741 ZCCHC6Q5VYS8 1495 aaKnown RBP31.34■■■□□ 2.61
PKLR-201ENST00000342741 DCAF1Q9Y4B6 1507 aa30.78■■■□□ 2.52
PKLR-201ENST00000342741 ABCC9O60706 1549 aa30.67■■■□□ 2.5
PKLR-201ENST00000342741 SHROOM4Q9ULL8 1493 aa30.64■■■□□ 2.49
PKLR-201ENST00000342741 DCAF8L2P0C7V8 631 aa30.59■■■□□ 2.49
PKLR-201ENST00000342741 MYO15BQ96JP2 1530 aa30.25■■■□□ 2.43
PKLR-201ENST00000342741 NACADO15069 1562 aa29.95■■■□□ 2.39
PKLR-201ENST00000342741 SCRIBQ14160 1630 aa29.73■■■□□ 2.35
PKLR-201ENST00000342741 RB1CC1Q8TDY2 1594 aa29.73■■■□□ 2.35
PKLR-201ENST00000342741 SUPT5HO00267 1087 aaKnown RBP29.69■■■□□ 2.34
PKLR-201ENST00000342741 UNC13AQ9UPW8 1703 aa29.17■■■□□ 2.26
PKLR-201ENST00000342741 RSF1Q96T23 1441 aaPredicted RBP29.03■■■□□ 2.24
PKLR-201ENST00000342741 CECR2Q9BXF3 1484 aa28.88■■■□□ 2.21
PKLR-201ENST00000342741 BICRAQ9NZM4 1560 aa28.84■■■□□ 2.21
PKLR-201ENST00000342741 PABPN1Q86U42 306 aaKnown RBP eCLIP28.78■■■□□ 2.2
PKLR-201ENST00000342741 MROH2BQ7Z745 1585 aa28.77■■■□□ 2.2
PKLR-201ENST00000342741 BAZ1AQ9NRL2 1556 aaPredicted RBP28.71■■■□□ 2.19
PKLR-201ENST00000342741 CHIC1Q5VXU3 224 aa28.65■■■□□ 2.18
PKLR-201ENST00000342741 WIZO95785 1651 aa28.59■■■□□ 2.17
PKLR-201ENST00000342741 SMARCA4P51532 1647 aa28.54■■■□□ 2.16
PKLR-201ENST00000342741 TOP2AP11388 1531 aaKnown RBP28.27■■■□□ 2.12
PKLR-201ENST00000342741 PEG3Q9GZU2 1588 aa28.17■■■□□ 2.1
PKLR-201ENST00000342741 SMARCA2P51531 1590 aa28.03■■■□□ 2.08
PKLR-201ENST00000342741 EIF4G1Q04637 1599 aaKnown RBP28.02■■■□□ 2.08
PKLR-201ENST00000342741 CCDC88BA6NC98 1476 aa27.99■■■□□ 2.07
PKLR-201ENST00000342741 ATAD2BQ9ULI0 1458 aa27.94■■■□□ 2.06
PKLR-201ENST00000342741 TRIM41Q8WV44 630 aa27.89■■■□□ 2.06
PKLR-201ENST00000342741 BAZ1BQ9UIG0 1483 aaKnown RBP27.82■■■□□ 2.04
PKLR-201ENST00000342741 CC2D2AQ9P2K1 1620 aa27.76■■■□□ 2.04
PKLR-201ENST00000342741 HMGXB3Q12766 1538 aa27.64■■■□□ 2.02
PKLR-201ENST00000342741 NCAPD3P42695 1498 aa27.64■■■□□ 2.01
PKLR-201ENST00000342741 DNAJC5BQ9UF47 199 aa27.59■■■□□ 2.01
PKLR-201ENST00000342741 LOC105371045A0A1W2PR82 267 aa27.57■■■□□ 2
PKLR-201ENST00000342741 ABCC8Q09428 1581 aa27.55■■■□□ 2
PKLR-201ENST00000342741 FAM9AQ8IZU1 332 aaPredicted RBP27.38■■□□□ 1.97
PKLR-201ENST00000342741 WRNQ14191 1432 aaPredicted RBP eCLIP27.31■■□□□ 1.96
PKLR-201ENST00000342741 SYNJ1O43426 1573 aa27.19■■□□□ 1.94
PKLR-201ENST00000342741 EEA1Q15075 1411 aa27.14■■□□□ 1.94
PKLR-201ENST00000342741 CFTRP13569 1480 aa27.14■■□□□ 1.93
PKLR-201ENST00000342741 PRDM2Q13029 1718 aa27.11■■□□□ 1.93
PKLR-201ENST00000342741 SOGA1O94964 1423 aa27.1■■□□□ 1.93
PKLR-201ENST00000342741 TOP2BQ02880 1626 aa27.07■■□□□ 1.92
PKLR-201ENST00000342741 BIVM-ERCC5R4GMW8 1640 aa27.04■■□□□ 1.92
PKLR-201ENST00000342741 RUSC2Q8N2Y8 1516 aa26.98■■□□□ 1.91
PKLR-201ENST00000342741 EHMT2Q96KQ7 1210 aa26.97■■□□□ 1.91
PKLR-201ENST00000342741 CSRNP3Q8WYN3 585 aa26.95■■□□□ 1.9
PKLR-201ENST00000342741 CADPSQ9ULU8 1353 aa26.95■■□□□ 1.9
PKLR-201ENST00000342741 CUX1P39880 1505 aa26.87■■□□□ 1.89
PKLR-201ENST00000342741 KIF21BO75037 1637 aa26.79■■□□□ 1.88
PKLR-201ENST00000342741 GOLGA3Q08378 1498 aa26.79■■□□□ 1.88
PKLR-201ENST00000342741 TNIKQ9UKE5 1360 aa26.78■■□□□ 1.88
PKLR-201ENST00000342741 CEP164Q9UPV0 1460 aa26.75■■□□□ 1.87
PKLR-201ENST00000342741 PCGF6Q9BYE7 350 aa26.75■■□□□ 1.87
PKLR-201ENST00000342741 NESP48681 1621 aa26.74■■□□□ 1.87
PKLR-201ENST00000342741 LAMC3Q9Y6N6 1575 aa26.71■■□□□ 1.87
PKLR-201ENST00000342741 CEP162Q5TB80 1403 aa26.67■■□□□ 1.86
PKLR-201ENST00000342741 FANCD2Q9BXW9 1451 aa26.66■■□□□ 1.86
PKLR-201ENST00000342741 TRIM26Q12899 539 aaPredicted RBP26.66■■□□□ 1.86
PKLR-201ENST00000342741 UBTFP17480 764 aaKnown RBP26.64■■□□□ 1.86
PKLR-201ENST00000342741 KIF27Q86VH2 1401 aa26.58■■□□□ 1.85
PKLR-201ENST00000342741 RAPGEF2Q9Y4G8 1499 aa26.54■■□□□ 1.84
PKLR-201ENST00000342741 ERICH3Q5RHP9 1530 aa26.53■■□□□ 1.84
PKLR-201ENST00000342741 DNMBPQ6XZF7 1577 aa26.51■■□□□ 1.83
PKLR-201ENST00000342741 FGD5Q6ZNL6 1462 aa26.51■■□□□ 1.83
PKLR-201ENST00000342741 PRXQ9BXM0 1461 aa26.51■■□□□ 1.83
PKLR-201ENST00000342741 PDS5BQ9NTI5 1447 aa26.5■■□□□ 1.83
PKLR-201ENST00000342741 KIF21AQ7Z4S6 1674 aa26.46■■□□□ 1.83
PKLR-201ENST00000342741 TOPBP1Q92547 1522 aa26.43■■□□□ 1.82
PKLR-201ENST00000342741 CUX2O14529 1486 aa26.41■■□□□ 1.82
PKLR-201ENST00000342741 CLIP1P30622 1438 aa26.37■■□□□ 1.81
PKLR-201ENST00000342741 ERCC6Q03468 1493 aa26.37■■□□□ 1.81
PKLR-201ENST00000342741 POLA1P09884 1462 aaPredicted RBP26.33■■□□□ 1.81
PKLR-201ENST00000342741 HRCP23327 699 aa26.32■■□□□ 1.8
PKLR-201ENST00000342741 URB2Q14146 1524 aaKnown RBP26.31■■□□□ 1.8
PKLR-201ENST00000342741 IGF1RP08069 1367 aa26.3■■□□□ 1.8
PKLR-201ENST00000342741 ABCA10Q8WWZ4 1543 aa26.29■■□□□ 1.8
PKLR-201ENST00000342741 RAD54L2Q9Y4B4 1467 aa26.24■■□□□ 1.79
PKLR-201ENST00000342741 PPARGC1BQ86YN6 1023 aaKnown RBP26.23■■□□□ 1.79
PKLR-201ENST00000342741 WDR97A6NE52 1622 aa26.2■■□□□ 1.79
PKLR-201ENST00000342741 VPS8Q8N3P4 1428 aa26.2■■□□□ 1.79
PKLR-201ENST00000342741 MRC2Q9UBG0 1479 aa26.19■■□□□ 1.78
PKLR-201ENST00000342741 CARMIL1Q5VZK9 1371 aa26.18■■□□□ 1.78
PKLR-201ENST00000342741 THOC2Q8NI27 1593 aaKnown RBP26.16■■□□□ 1.78
PKLR-201ENST00000342741 CUL7Q14999 1698 aa26.1■■□□□ 1.77
PKLR-201ENST00000342741 WDR62O43379 1518 aa26.08■■□□□ 1.77
PKLR-201ENST00000342741 RANGAP1P46060 587 aaPredicted RBP26.07■■□□□ 1.76
PKLR-201ENST00000342741 ABCA5Q8WWZ7 1642 aa26.06■■□□□ 1.76
PKLR-201ENST00000342741 ARAP1Q96P48 1450 aa26.06■■□□□ 1.76
PKLR-201ENST00000342741 TARBP1Q13395 1621 aaKnown RBP26.01■■□□□ 1.76
PKLR-201ENST00000342741 ARHGAP35Q9NRY4 1499 aa25.98■■□□□ 1.75
PKLR-201ENST00000342741 GAPVD1Q14C86 1478 aa25.97■■□□□ 1.75
PKLR-201ENST00000342741 APLP2Q06481 763 aa25.95■■□□□ 1.74
PKLR-201ENST00000342741 TDRD9Q8NDG6 1382 aaKnown RBP25.94■■□□□ 1.74
PKLR-201ENST00000342741 TTBK1Q5TCY1 1321 aaPredicted RBP25.93■■□□□ 1.74
PKLR-201ENST00000342741 CTTNBP2Q8WZ74 1663 aa25.9■■□□□ 1.74
PKLR-201ENST00000342741 PBRM1Q86U86 1689 aa25.84■■□□□ 1.73
PKLR-201ENST00000342741 ZEB1P37275 1124 aaPredicted RBP25.81■■□□□ 1.72
PKLR-201ENST00000342741 IFT140Q96RY7 1462 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms