RNA–Protein interactions for RNA: ENST00000341832.10

CDK11B-203, Transcript of cyclin dependent kinase 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK11B, Length 2,998 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-203ENST00000341832 SF3B1O75533 1304 aaKnown RBP eCLIP13.86□□□□□ -0.193e-16■■■■■ 120.6
CDK11B-203ENST00000341832 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.05■□□□□ 0.165e-19■■■■■ 117.4
CDK11B-203ENST00000341832 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.62□□□□□ -0.078e-7■■■■■ 41.1
CDK11B-203ENST00000341832 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.18□□□□□ -0.948e-7■■■■■ 37.5
CDK11B-203ENST00000341832 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.76□□□□□ -0.058e-6■■■■■ 36.8
CDK11B-203ENST00000341832 HLTFQ14527 1009 aaKnown RBP eCLIP14.52□□□□□ -0.093e-8■■■■■ 30.5
CDK11B-203ENST00000341832 YWHAGP61981 247 aaKnown RBP eCLIP14.08□□□□□ -0.168e-8■■■■■ 30.3
CDK11B-203ENST00000341832 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.734e-7■■■■■ 29.4
CDK11B-203ENST00000341832 SUB1P53999 127 aaKnown RBP eCLIP10.17□□□□□ -0.785e-6■■■■■ 28.3
CDK11B-203ENST00000341832 CPSF6Q16630 551 aaKnown RBP eCLIP11.95□□□□□ -0.52e-6■■■■□ 23.7
CDK11B-203ENST00000341832 EFTUD2Q15029 972 aaKnown RBP eCLIP14.2□□□□□ -0.142e-6■■■■□ 23.1
CDK11B-203ENST00000341832 SAFB2Q14151 953 aaKnown RBP eCLIP15.53■□□□□ 0.088e-9■■■■□ 22.1
CDK11B-203ENST00000341832 NIPBLQ6KC79 2804 aaeCLIP9.56□□□□□ -0.881e-6■■■■□ 21.7
CDK11B-203ENST00000341832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.52■□□□□ 0.249e-7■■■■□ 20.5
CDK11B-203ENST00000341832 ZNF622Q969S3 477 aaKnown RBP eCLIP17.31■□□□□ 0.361e-6■■■□□ 18.5
CDK11B-203ENST00000341832 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.7■□□□□ 0.17e-7■■■□□ 17.4
CDK11B-203ENST00000341832 PPIGQ13427 754 aaKnown RBP eCLIP12.72□□□□□ -0.372e-10■■■□□ 16.1
CDK11B-203ENST00000341832 TRA2AQ13595 282 aaKnown RBP eCLIP12.82□□□□□ -0.362e-8■■□□□ 14.4
CDK11B-203ENST00000341832 LARP4Q71RC2 724 aaKnown RBP eCLIP12.86□□□□□ -0.351e-8■■□□□ 14
CDK11B-203ENST00000341832 PUM1Q14671 1186 aaKnown RBP eCLIP13.36□□□□□ -0.271e-7■■□□□ 11.7
CDK11B-203ENST00000341832 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.11□□□□□ -0.314e-6■□□□□ 10.9
CDK11B-203ENST00000341832 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.2■□□□□ 0.026e-7■□□□□ 9.7
Retrieved 22 of 22 RNA–protein pairs in 6.6 ms