RNA–Protein interactions for RNA: ENST00000339282.11

ZNF564-201, Transcript of zinc finger protein 564, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF564, Length 2,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF564-201ENST00000339282 NISCHQ9Y2I1 1504 aa27.48■■□□□ 1.99
ZNF564-201ENST00000339282 SHROOM4Q9ULL8 1493 aa23.82■■□□□ 1.4
ZNF564-201ENST00000339282 SUPT5HO00267 1087 aaKnown RBP23.35■■□□□ 1.33
ZNF564-201ENST00000339282 DCAF8L2P0C7V8 631 aa23.3■■□□□ 1.32
ZNF564-201ENST00000339282 ZCCHC6Q5VYS8 1495 aaKnown RBP23.2■■□□□ 1.3
ZNF564-201ENST00000339282 CCDC180Q9P1Z9 1646 aa23.15■■□□□ 1.3
ZNF564-201ENST00000339282 CHIC1Q5VXU3 224 aa22.52■■□□□ 1.2
ZNF564-201ENST00000339282 MYO15BQ96JP2 1530 aa22.41■■□□□ 1.18
ZNF564-201ENST00000339282 DCAF1Q9Y4B6 1507 aa22.35■■□□□ 1.17
ZNF564-201ENST00000339282 SCRIBQ14160 1630 aa22.03■■□□□ 1.12
ZNF564-201ENST00000339282 LOC105371045A0A1W2PR82 267 aa22.02■■□□□ 1.12
ZNF564-201ENST00000339282 ABCC9O60706 1549 aa21.92■■□□□ 1.1
ZNF564-201ENST00000339282 PCGF6Q9BYE7 350 aa21.92■■□□□ 1.1
ZNF564-201ENST00000339282 RSF1Q96T23 1441 aaPredicted RBP21.83■■□□□ 1.09
ZNF564-201ENST00000339282 HRCP23327 699 aa21.73■■□□□ 1.07
ZNF564-201ENST00000339282 FAM9AQ8IZU1 332 aaPredicted RBP21.65■■□□□ 1.06
ZNF564-201ENST00000339282 TRIM41Q8WV44 630 aa21.62■■□□□ 1.05
ZNF564-201ENST00000339282 EHMT2Q96KQ7 1210 aa21.62■■□□□ 1.05
ZNF564-201ENST00000339282 CECR2Q9BXF3 1484 aa21.61■■□□□ 1.05
ZNF564-201ENST00000339282 RB1CC1Q8TDY2 1594 aa21.58■■□□□ 1.05
ZNF564-201ENST00000339282 PPARGC1BQ86YN6 1023 aaKnown RBP21.52■■□□□ 1.04
ZNF564-201ENST00000339282 NACADO15069 1562 aa21.52■■□□□ 1.04
ZNF564-201ENST00000339282 MROH2BQ7Z745 1585 aa21.46■■□□□ 1.03
ZNF564-201ENST00000339282 WIZO95785 1651 aa21.32■■□□□ 1
ZNF564-201ENST00000339282 TRIM26Q12899 539 aaPredicted RBP21.32■■□□□ 1
ZNF564-201ENST00000339282 PABPN1Q86U42 306 aaKnown RBP eCLIP21.11■□□□□ 0.97
ZNF564-201ENST00000339282 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
ZNF564-201ENST00000339282 CCDC88BA6NC98 1476 aa20.93■□□□□ 0.94
ZNF564-201ENST00000339282 ABCC8Q09428 1581 aa20.92■□□□□ 0.94
ZNF564-201ENST00000339282 SMARCA4P51532 1647 aa20.91■□□□□ 0.94
ZNF564-201ENST00000339282 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
ZNF564-201ENST00000339282 UNC13AQ9UPW8 1703 aa20.87■□□□□ 0.93
ZNF564-201ENST00000339282 TTBK1Q5TCY1 1321 aaPredicted RBP20.87■□□□□ 0.93
ZNF564-201ENST00000339282 EIF4G1Q04637 1599 aaKnown RBP20.85■□□□□ 0.93
ZNF564-201ENST00000339282 SMARCA2P51531 1590 aa20.8■□□□□ 0.92
ZNF564-201ENST00000339282 SOGA1O94964 1423 aa20.76■□□□□ 0.91
ZNF564-201ENST00000339282 ZEB1P37275 1124 aaPredicted RBP20.73■□□□□ 0.91
ZNF564-201ENST00000339282 BICRAQ9NZM4 1560 aa20.7■□□□□ 0.9
ZNF564-201ENST00000339282 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.68■□□□□ 0.9
ZNF564-201ENST00000339282 RUSC2Q8N2Y8 1516 aa20.68■□□□□ 0.9
ZNF564-201ENST00000339282 UBTFP17480 764 aaKnown RBP20.66■□□□□ 0.9
ZNF564-201ENST00000339282 CSRNP3Q8WYN3 585 aa20.62■□□□□ 0.89
ZNF564-201ENST00000339282 CEP162Q5TB80 1403 aa20.57■□□□□ 0.88
ZNF564-201ENST00000339282 CCER1Q8TC90 406 aaPredicted RBP20.56■□□□□ 0.88
ZNF564-201ENST00000339282 WRNQ14191 1432 aaPredicted RBP eCLIP20.5■□□□□ 0.87
ZNF564-201ENST00000339282 RANGAP1P46060 587 aaPredicted RBP20.48■□□□□ 0.87
ZNF564-201ENST00000339282 TNIKQ9UKE5 1360 aa20.47■□□□□ 0.87
ZNF564-201ENST00000339282 ATAD2BQ9ULI0 1458 aa20.45■□□□□ 0.86
ZNF564-201ENST00000339282 BAZ1BQ9UIG0 1483 aaKnown RBP20.41■□□□□ 0.86
ZNF564-201ENST00000339282 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
ZNF564-201ENST00000339282 EEA1Q15075 1411 aa20.38■□□□□ 0.85
ZNF564-201ENST00000339282 PEG3Q9GZU2 1588 aa20.38■□□□□ 0.85
ZNF564-201ENST00000339282 GOLGA3Q08378 1498 aa20.35■□□□□ 0.85
ZNF564-201ENST00000339282 HNRNPUL2Q1KMD3 747 aaKnown RBP20.24■□□□□ 0.83
ZNF564-201ENST00000339282 CEP164Q9UPV0 1460 aa20.22■□□□□ 0.83
ZNF564-201ENST00000339282 CLIP1P30622 1438 aa20.2■□□□□ 0.82
ZNF564-201ENST00000339282 RAPGEF2Q9Y4G8 1499 aa20.2■□□□□ 0.82
ZNF564-201ENST00000339282 APLP2Q06481 763 aa20.12■□□□□ 0.81
ZNF564-201ENST00000339282 KIF21BO75037 1637 aa20.09■□□□□ 0.81
ZNF564-201ENST00000339282 SCAF1Q9H7N4 1312 aaKnown RBP20.08■□□□□ 0.8
ZNF564-201ENST00000339282 DIEXFQ68CQ4 756 aaKnown RBP20.08■□□□□ 0.8
ZNF564-201ENST00000339282 VPS8Q8N3P4 1428 aa20.04■□□□□ 0.8
ZNF564-201ENST00000339282 TOP2BQ02880 1626 aa20.03■□□□□ 0.8
ZNF564-201ENST00000339282 NCAPD3P42695 1498 aa20■□□□□ 0.79
ZNF564-201ENST00000339282 CUX1P39880 1505 aa19.95■□□□□ 0.78
ZNF564-201ENST00000339282 KANK4Q5T7N3 995 aaPredicted RBP19.92■□□□□ 0.78
ZNF564-201ENST00000339282 NEUROD1Q13562 356 aa19.91■□□□□ 0.78
ZNF564-201ENST00000339282 HMGXB3Q12766 1538 aa19.89■□□□□ 0.78
ZNF564-201ENST00000339282 ZNF316A6NFI3 1004 aaPredicted RBP19.89■□□□□ 0.78
ZNF564-201ENST00000339282 BIVM-ERCC5R4GMW8 1640 aa19.89■□□□□ 0.77
ZNF564-201ENST00000339282 PRXQ9BXM0 1461 aa19.89■□□□□ 0.77
ZNF564-201ENST00000339282 CFTRP13569 1480 aa19.85■□□□□ 0.77
ZNF564-201ENST00000339282 KIF27Q86VH2 1401 aa19.85■□□□□ 0.77
ZNF564-201ENST00000339282 ACIN1Q9UKV3 1341 aaKnown RBP19.84■□□□□ 0.77
ZNF564-201ENST00000339282 ARAP1Q96P48 1450 aa19.83■□□□□ 0.77
ZNF564-201ENST00000339282 ITGAEP38570 1179 aa19.79■□□□□ 0.76
ZNF564-201ENST00000339282 YTHDC1Q96MU7 727 aaKnown RBP19.79■□□□□ 0.76
ZNF564-201ENST00000339282 ERICH3Q5RHP9 1530 aa19.77■□□□□ 0.76
ZNF564-201ENST00000339282 CUX2O14529 1486 aa19.74■□□□□ 0.75
ZNF564-201ENST00000339282 MIER1Q8N108 512 aa19.71■□□□□ 0.75
ZNF564-201ENST00000339282 CADPSQ9ULU8 1353 aa19.7■□□□□ 0.74
ZNF564-201ENST00000339282 IGF1RP08069 1367 aa19.7■□□□□ 0.74
ZNF564-201ENST00000339282 P3H3Q8IVL6 736 aa19.7■□□□□ 0.74
ZNF564-201ENST00000339282 GTF3C3Q9Y5Q9 886 aa19.7■□□□□ 0.74
ZNF564-201ENST00000339282 CENPBP07199 599 aaPredicted RBP19.69■□□□□ 0.74
ZNF564-201ENST00000339282 ARHGAP35Q9NRY4 1499 aa19.68■□□□□ 0.74
ZNF564-201ENST00000339282 ATP1B4Q9UN42 357 aaPredicted RBP19.66■□□□□ 0.74
ZNF564-201ENST00000339282 FGD5Q6ZNL6 1462 aa19.63■□□□□ 0.73
ZNF564-201ENST00000339282 CARMIL1Q5VZK9 1371 aa19.62■□□□□ 0.73
ZNF564-201ENST00000339282 DHX57Q6P158 1386 aaKnown RBP19.62■□□□□ 0.73
ZNF564-201ENST00000339282 CC2D2AQ9P2K1 1620 aa19.57■□□□□ 0.72
ZNF564-201ENST00000339282 CCNB3Q8WWL7 1395 aa19.55■□□□□ 0.72
ZNF564-201ENST00000339282 RAD54L2Q9Y4B4 1467 aa19.53■□□□□ 0.72
ZNF564-201ENST00000339282 FANCD2Q9BXW9 1451 aa19.53■□□□□ 0.72
ZNF564-201ENST00000339282 RRBP1Q9P2E9 1410 aaKnown RBP19.52■□□□□ 0.72
ZNF564-201ENST00000339282 NESP48681 1621 aa19.52■□□□□ 0.72
ZNF564-201ENST00000339282 FAM50AQ14320 339 aaKnown RBP19.49■□□□□ 0.71
ZNF564-201ENST00000339282 DNAJC5BQ9UF47 199 aa19.45■□□□□ 0.7
ZNF564-201ENST00000339282 PRDM2Q13029 1718 aa19.44■□□□□ 0.7
ZNF564-201ENST00000339282 CLSPNQ9HAW4 1339 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms