RNA–Protein interactions for RNA: ENST00000336755.9

ZCCHC7-202, Transcript of zinc finger CCHC-type containing 7, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZCCHC7, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC7-202ENST00000336755 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.03□□□□□ -1.765e-11■■■■■ 94.1
ZCCHC7-202ENST00000336755 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.83□□□□□ -1.481e-6■■■■■ 87.1
ZCCHC7-202ENST00000336755 XRCC6P12956 609 aaKnown RBP eCLIP4.73□□□□□ -1.654e-15■■■■■ 75.3
ZCCHC7-202ENST00000336755 PCBP2Q15366 365 aaKnown RBP eCLIP4.71□□□□□ -1.664e-7■■■■■ 64.7
ZCCHC7-202ENST00000336755 FMR1Q06787 632 aaKnown RBP eCLIP5.06□□□□□ -1.68e-16■■■■■ 55.6
ZCCHC7-202ENST00000336755 SF3B1O75533 1304 aaKnown RBP eCLIP4.23□□□□□ -1.731e-6■■■■■ 54.5
ZCCHC7-202ENST00000336755 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5□□□□□ -1.613e-8■■■■■ 50.8
ZCCHC7-202ENST00000336755 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.32□□□□□ -1.722e-6■■■■■ 41.6
ZCCHC7-202ENST00000336755 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.34□□□□□ -1.714e-8■■■■■ 41
ZCCHC7-202ENST00000336755 PTBP1P26599 531 aaKnown RBP eCLIP4.64□□□□□ -1.673e-7■■■■■ 34
ZCCHC7-202ENST00000336755 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.42□□□□□ -1.71e-6■■■■■ 33.9
ZCCHC7-202ENST00000336755 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.37□□□□□ -1.716e-8■■■■■ 30.8
ZCCHC7-202ENST00000336755 ILF3Q12906 894 aaKnown RBP eCLIP4.27□□□□□ -1.734e-7■■■■■ 28.7
ZCCHC7-202ENST00000336755 HNRNPMP52272 730 aaKnown RBP eCLIP5.44□□□□□ -1.541e-6■■■■■ 28.1
ZCCHC7-202ENST00000336755 SRSF7Q16629 238 aaKnown RBP eCLIP3.82□□□□□ -1.84e-8■■■■□ 26.6
ZCCHC7-202ENST00000336755 QKIQ96PU8 341 aaKnown RBP eCLIP4.22□□□□□ -1.731e-8■■■■□ 25.8
ZCCHC7-202ENST00000336755 U2AF1Q01081 240 aaKnown RBP eCLIP5.27□□□□□ -1.572e-6■■■■□ 24.7
ZCCHC7-202ENST00000336755 GTF2F1P35269 517 aaKnown RBP eCLIP5.43□□□□□ -1.549e-8■■■■□ 24.3
ZCCHC7-202ENST00000336755 AARSP49588 968 aaKnown RBP eCLIP4.5□□□□□ -1.692e-6■■■■□ 23.6
ZCCHC7-202ENST00000336755 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.67□□□□□ -1.184e-7■■■■□ 23.3
ZCCHC7-202ENST00000336755 SND1Q7KZF4 910 aaKnown RBP eCLIP5.78□□□□□ -1.485e-6■■■■□ 22.5
ZCCHC7-202ENST00000336755 TARDBPQ13148 414 aaKnown RBP eCLIP4.17□□□□□ -1.745e-7■■■■□ 22.4
ZCCHC7-202ENST00000336755 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.54□□□□□ -1.684e-6■■■■□ 22
ZCCHC7-202ENST00000336755 ZRANB2O95218 330 aaKnown RBP eCLIP5.74□□□□□ -1.492e-6■■■■□ 21.4
ZCCHC7-202ENST00000336755 U2AF2P26368 475 aaKnown RBP eCLIP4.59□□□□□ -1.671e-6■■■■□ 21.3
ZCCHC7-202ENST00000336755 TROVE2P10155 538 aaKnown RBP eCLIP4.76□□□□□ -1.656e-44■■■■□ 20.1
ZCCHC7-202ENST00000336755 HNRNPKP61978 463 aaKnown RBP eCLIP4.47□□□□□ -1.696e-10■■■■□ 19.5
ZCCHC7-202ENST00000336755 MATR3P43243 847 aaKnown RBP eCLIP4.97□□□□□ -1.612e-6■■■□□ 18.3
ZCCHC7-202ENST00000336755 EIF4G2P78344 907 aaKnown RBP eCLIP5.25□□□□□ -1.579e-8■■■□□ 18.3
ZCCHC7-202ENST00000336755 TIA1P31483 386 aaKnown RBP eCLIP4.2□□□□□ -1.742e-6■■■□□ 18.2
ZCCHC7-202ENST00000336755 LSM11P83369 360 aaKnown RBP eCLIP7.12□□□□□ -1.274e-24■■■□□ 16.6
ZCCHC7-202ENST00000336755 PABPC4Q13310 644 aaKnown RBP eCLIP4.85□□□□□ -1.633e-6■■■□□ 16.5
ZCCHC7-202ENST00000336755 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.6□□□□□ -1.511e-6■■■□□ 16.3
ZCCHC7-202ENST00000336755 KHSRPQ92945 711 aaKnown RBP eCLIP7.31□□□□□ -1.242e-7■■■□□ 16
ZCCHC7-202ENST00000336755 AQRO60306 1485 aaKnown RBP eCLIP6.17□□□□□ -1.422e-7■■■□□ 16
ZCCHC7-202ENST00000336755 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.95□□□□□ -1.941e-6■■■□□ 14.9
ZCCHC7-202ENST00000336755 RBM22Q9NW64 420 aaKnown RBP eCLIP3.69□□□□□ -1.822e-8■■□□□ 14.1
ZCCHC7-202ENST00000336755 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.33□□□□□ -0.766e-11■■□□□ 13.6
ZCCHC7-202ENST00000336755 HNRNPLP14866 589 aaKnown RBP eCLIP4.66□□□□□ -1.661e-7■■□□□ 13.1
ZCCHC7-202ENST00000336755 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.53□□□□□ -1.685e-7■■□□□ 12.8
ZCCHC7-202ENST00000336755 YBX3P16989 372 aaKnown RBP eCLIP4.71□□□□□ -1.661e-8■■□□□ 12.6
ZCCHC7-202ENST00000336755 SAFB2Q14151 953 aaKnown RBP eCLIP5.47□□□□□ -1.534e-7■■□□□ 12.5
ZCCHC7-202ENST00000336755 RBM15Q96T37 977 aaKnown RBP eCLIP4.41□□□□□ -1.72e-7■■□□□ 12
ZCCHC7-202ENST00000336755 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.24□□□□□ -1.738e-7■■□□□ 11.7
ZCCHC7-202ENST00000336755 SF3B4Q15427 424 aaKnown RBP eCLIP4.47□□□□□ -1.691e-6■□□□□ 11.3
ZCCHC7-202ENST00000336755 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.96□□□□□ -1.782e-6■□□□□ 10.9
ZCCHC7-202ENST00000336755 NIPBLQ6KC79 2804 aaeCLIP2.83□□□□□ -1.962e-10■□□□□ 10.6
ZCCHC7-202ENST00000336755 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.49□□□□□ -1.691e-8■□□□□ 10.5
ZCCHC7-202ENST00000336755 DDX3XO00571 662 aaKnown RBP eCLIP4.57□□□□□ -1.682e-10■□□□□ 10.5
ZCCHC7-202ENST00000336755 HNRNPCP07910 306 aaKnown RBP eCLIP5.31□□□□□ -1.563e-6■□□□□ 10.1
ZCCHC7-202ENST00000336755 CPSF6Q16630 551 aaKnown RBP eCLIP4.51□□□□□ -1.692e-6■□□□□ 10
ZCCHC7-202ENST00000336755 ZNF622Q969S3 477 aaKnown RBP eCLIP5.89□□□□□ -1.472e-13■□□□□ 9.9
ZCCHC7-202ENST00000336755 RBFOX2O43251 390 aaKnown RBP eCLIP3.81□□□□□ -1.82e-9■□□□□ 9.5
ZCCHC7-202ENST00000336755 AGGF1Q8N302 714 aaeCLIP4.84□□□□□ -1.635e-13■□□□□ 9.3
ZCCHC7-202ENST00000336755 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.61□□□□□ -1.517e-11■□□□□ 9.3
ZCCHC7-202ENST00000336755 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.75□□□□□ -1.651e-6■□□□□ 9
ZCCHC7-202ENST00000336755 PCBP1Q15365 356 aaKnown RBP eCLIP4.72□□□□□ -1.651e-10■□□□□ 8.9
Retrieved 57 of 57 RNA–protein pairs in 9.9 ms