RNA–Protein interactions for RNA: ENST00000331666.10

EIF3C-201, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3C, Length 3,145 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-201ENST00000331666 NISCHQ9Y2I1 1504 aa25.28■■□□□ 1.64
EIF3C-201ENST00000331666 SHROOM4Q9ULL8 1493 aa22.83■■□□□ 1.24
EIF3C-201ENST00000331666 SUPT5HO00267 1087 aaKnown RBP22.7■■□□□ 1.22
EIF3C-201ENST00000331666 HRCP23327 699 aa22.61■■□□□ 1.21
EIF3C-201ENST00000331666 PPARGC1BQ86YN6 1023 aaKnown RBP22.43■■□□□ 1.18
EIF3C-201ENST00000331666 PCGF6Q9BYE7 350 aa22.4■■□□□ 1.18
EIF3C-201ENST00000331666 MYO15BQ96JP2 1530 aa22.24■■□□□ 1.15
EIF3C-201ENST00000331666 CHIC1Q5VXU3 224 aa22.09■■□□□ 1.13
EIF3C-201ENST00000331666 LOC105371045A0A1W2PR82 267 aa21.77■■□□□ 1.08
EIF3C-201ENST00000331666 DCAF8L2P0C7V8 631 aa21.62■■□□□ 1.05
EIF3C-201ENST00000331666 DCAF1Q9Y4B6 1507 aa21.49■■□□□ 1.03
EIF3C-201ENST00000331666 TRIM26Q12899 539 aaPredicted RBP21.47■■□□□ 1.03
EIF3C-201ENST00000331666 ZCCHC6Q5VYS8 1495 aaKnown RBP21.46■■□□□ 1.03
EIF3C-201ENST00000331666 SCAF1Q9H7N4 1312 aaKnown RBP21.45■■□□□ 1.02
EIF3C-201ENST00000331666 PELP1Q8IZL8 1130 aaKnown RBP21.45■■□□□ 1.02
EIF3C-201ENST00000331666 CCDC180Q9P1Z9 1646 aa21.19■□□□□ 0.98
EIF3C-201ENST00000331666 EHMT2Q96KQ7 1210 aa21.17■□□□□ 0.98
EIF3C-201ENST00000331666 ZEB1P37275 1124 aaPredicted RBP21.14■□□□□ 0.97
EIF3C-201ENST00000331666 FAM9AQ8IZU1 332 aaPredicted RBP21.07■□□□□ 0.96
EIF3C-201ENST00000331666 NEUROD1Q13562 356 aa20.92■□□□□ 0.94
EIF3C-201ENST00000331666 ACIN1Q9UKV3 1341 aaKnown RBP20.86■□□□□ 0.93
EIF3C-201ENST00000331666 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
EIF3C-201ENST00000331666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.81■□□□□ 0.92
EIF3C-201ENST00000331666 GTF3C3Q9Y5Q9 886 aa20.8■□□□□ 0.92
EIF3C-201ENST00000331666 CCER1Q8TC90 406 aaPredicted RBP20.69■□□□□ 0.9
EIF3C-201ENST00000331666 DIEXFQ68CQ4 756 aaKnown RBP20.61■□□□□ 0.89
EIF3C-201ENST00000331666 TTBK1Q5TCY1 1321 aaPredicted RBP20.61■□□□□ 0.89
EIF3C-201ENST00000331666 CENPBP07199 599 aaPredicted RBP20.57■□□□□ 0.88
EIF3C-201ENST00000331666 YTHDC1Q96MU7 727 aaKnown RBP20.5■□□□□ 0.87
EIF3C-201ENST00000331666 MYT1Q01538 1121 aa20.48■□□□□ 0.87
EIF3C-201ENST00000331666 RSF1Q96T23 1441 aaPredicted RBP20.43■□□□□ 0.86
EIF3C-201ENST00000331666 RB1CC1Q8TDY2 1594 aa20.39■□□□□ 0.85
EIF3C-201ENST00000331666 ABCC9O60706 1549 aa20.37■□□□□ 0.85
EIF3C-201ENST00000331666 SCRIBQ14160 1630 aa20.21■□□□□ 0.83
EIF3C-201ENST00000331666 ZNF316A6NFI3 1004 aaPredicted RBP20.16■□□□□ 0.82
EIF3C-201ENST00000331666 MIER1Q8N108 512 aa20.14■□□□□ 0.82
EIF3C-201ENST00000331666 CECR2Q9BXF3 1484 aa19.97■□□□□ 0.79
EIF3C-201ENST00000331666 HNRNPUL2Q1KMD3 747 aaKnown RBP19.96■□□□□ 0.79
EIF3C-201ENST00000331666 CEP162Q5TB80 1403 aa19.88■□□□□ 0.77
EIF3C-201ENST00000331666 MROH2BQ7Z745 1585 aa19.87■□□□□ 0.77
EIF3C-201ENST00000331666 UBTFP17480 764 aaKnown RBP19.85■□□□□ 0.77
EIF3C-201ENST00000331666 WIZO95785 1651 aa19.8■□□□□ 0.76
EIF3C-201ENST00000331666 WRNQ14191 1432 aaPredicted RBP eCLIP19.78■□□□□ 0.76
EIF3C-201ENST00000331666 CCDC88BA6NC98 1476 aa19.77■□□□□ 0.76
EIF3C-201ENST00000331666 ABCC8Q09428 1581 aa19.76■□□□□ 0.75
EIF3C-201ENST00000331666 SUPT16HQ9Y5B9 1047 aaKnown RBP19.75■□□□□ 0.75
EIF3C-201ENST00000331666 SOGA1O94964 1423 aa19.74■□□□□ 0.75
EIF3C-201ENST00000331666 RANGAP1P46060 587 aaPredicted RBP19.67■□□□□ 0.74
EIF3C-201ENST00000331666 TNIKQ9UKE5 1360 aa19.65■□□□□ 0.74
EIF3C-201ENST00000331666 RUSC2Q8N2Y8 1516 aa19.64■□□□□ 0.74
EIF3C-201ENST00000331666 TSHZ2Q9NRE2 1034 aa19.64■□□□□ 0.73
EIF3C-201ENST00000331666 CSRNP3Q8WYN3 585 aa19.63■□□□□ 0.73
EIF3C-201ENST00000331666 BCANQ96GW7 911 aa19.58■□□□□ 0.72
EIF3C-201ENST00000331666 ANP32EQ9BTT0 268 aa19.58■□□□□ 0.72
EIF3C-201ENST00000331666 EIF4G1Q04637 1599 aaKnown RBP19.56■□□□□ 0.72
EIF3C-201ENST00000331666 BCL11AQ9H165 835 aa19.55■□□□□ 0.72
EIF3C-201ENST00000331666 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
EIF3C-201ENST00000331666 KCNH8Q96L42 1107 aa19.48■□□□□ 0.71
EIF3C-201ENST00000331666 APLP2Q06481 763 aa19.46■□□□□ 0.71
EIF3C-201ENST00000331666 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
EIF3C-201ENST00000331666 CLSPNQ9HAW4 1339 aa19.38■□□□□ 0.69
EIF3C-201ENST00000331666 CLIP1P30622 1438 aa19.36■□□□□ 0.69
EIF3C-201ENST00000331666 NACADO15069 1562 aa19.34■□□□□ 0.69
EIF3C-201ENST00000331666 FKBP8Q14318 412 aa19.33■□□□□ 0.69
EIF3C-201ENST00000331666 DHX57Q6P158 1386 aaKnown RBP19.3■□□□□ 0.68
EIF3C-201ENST00000331666 EEA1Q15075 1411 aa19.3■□□□□ 0.68
EIF3C-201ENST00000331666 SMARCA2P51531 1590 aa19.28■□□□□ 0.68
EIF3C-201ENST00000331666 TOP2AP11388 1531 aaKnown RBP19.27■□□□□ 0.68
EIF3C-201ENST00000331666 ITGAEP38570 1179 aa19.26■□□□□ 0.67
EIF3C-201ENST00000331666 VPS8Q8N3P4 1428 aa19.26■□□□□ 0.67
EIF3C-201ENST00000331666 CEP164Q9UPV0 1460 aa19.2■□□□□ 0.66
EIF3C-201ENST00000331666 RBM19Q9Y4C8 960 aaKnown RBP19.19■□□□□ 0.66
EIF3C-201ENST00000331666 KANK4Q5T7N3 995 aaPredicted RBP19.17■□□□□ 0.66
EIF3C-201ENST00000331666 DDX10Q13206 875 aaKnown RBP19.15■□□□□ 0.66
EIF3C-201ENST00000331666 RAPGEF2Q9Y4G8 1499 aa19.15■□□□□ 0.66
EIF3C-201ENST00000331666 TRIM52Q96A61 297 aa19.14■□□□□ 0.65
EIF3C-201ENST00000331666 HIRIP3Q9BW71 556 aaPredicted RBP19.11■□□□□ 0.65
EIF3C-201ENST00000331666 SMARCA4P51532 1647 aa19.09■□□□□ 0.65
EIF3C-201ENST00000331666 NEFLP07196 543 aa19.09■□□□□ 0.65
EIF3C-201ENST00000331666 KIF21BO75037 1637 aa19.08■□□□□ 0.64
EIF3C-201ENST00000331666 SYNJ1O43426 1573 aa19.05■□□□□ 0.64
EIF3C-201ENST00000331666 MSH5O43196 834 aa19.05■□□□□ 0.64
EIF3C-201ENST00000331666 IRX6P78412 446 aaPredicted RBP18.98■□□□□ 0.63
EIF3C-201ENST00000331666 SIN3AQ96ST3 1273 aa18.98■□□□□ 0.63
EIF3C-201ENST00000331666 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
EIF3C-201ENST00000331666 BAZ1BQ9UIG0 1483 aaKnown RBP18.92■□□□□ 0.62
EIF3C-201ENST00000331666 RAB3GAP2Q9H2M9 1393 aa18.89■□□□□ 0.61
EIF3C-201ENST00000331666 ERICH6Q7L0X2 663 aa18.89■□□□□ 0.61
EIF3C-201ENST00000331666 ARAP1Q96P48 1450 aa18.88■□□□□ 0.61
EIF3C-201ENST00000331666 CCNB3Q8WWL7 1395 aa18.88■□□□□ 0.61
EIF3C-201ENST00000331666 PPP1R15AO75807 674 aaPredicted RBP18.85■□□□□ 0.61
EIF3C-201ENST00000331666 RRBP1Q9P2E9 1410 aaKnown RBP18.84■□□□□ 0.61
EIF3C-201ENST00000331666 WDR97A6NE52 1622 aa18.84■□□□□ 0.61
EIF3C-201ENST00000331666 ANP32CO43423 234 aa18.84■□□□□ 0.61
EIF3C-201ENST00000331666 MAPKBP1O60336 1514 aa18.81■□□□□ 0.6
EIF3C-201ENST00000331666 FAM50AQ14320 339 aaKnown RBP18.78■□□□□ 0.6
EIF3C-201ENST00000331666 CDK11AQ9UQ88 783 aaPredicted RBP18.76■□□□□ 0.59
EIF3C-201ENST00000331666 HNRNPUQ00839 825 aaKnown RBP eCLIP18.76■□□□□ 0.59
EIF3C-201ENST00000331666 CUX2O14529 1486 aa18.73■□□□□ 0.59
EIF3C-201ENST00000331666 CCER2I3L3R5 266 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms