RNA–Protein interactions for RNA: ENST00000330796.9

PRMT3-201, Transcript of protein arginine methyltransferase 3, humanhuman

TSL 1 (best)

Gene PRMT3, Length 2,530 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRMT3-201ENST00000330796 NISCHQ9Y2I1 1504 aa30.98■■■□□ 2.55
PRMT3-201ENST00000330796 SHROOM4Q9ULL8 1493 aa26.92■■□□□ 1.9
PRMT3-201ENST00000330796 SUPT5HO00267 1087 aaKnown RBP26.58■■□□□ 1.84
PRMT3-201ENST00000330796 ZCCHC6Q5VYS8 1495 aaKnown RBP26.29■■□□□ 1.8
PRMT3-201ENST00000330796 MYO15BQ96JP2 1530 aa26.06■■□□□ 1.76
PRMT3-201ENST00000330796 CCDC180Q9P1Z9 1646 aa26.04■■□□□ 1.76
PRMT3-201ENST00000330796 CHIC1Q5VXU3 224 aa25.98■■□□□ 1.75
PRMT3-201ENST00000330796 HRCP23327 699 aa25.89■■□□□ 1.74
PRMT3-201ENST00000330796 DCAF8L2P0C7V8 631 aa25.75■■□□□ 1.71
PRMT3-201ENST00000330796 PCGF6Q9BYE7 350 aa25.66■■□□□ 1.7
PRMT3-201ENST00000330796 PPARGC1BQ86YN6 1023 aaKnown RBP25.42■■□□□ 1.66
PRMT3-201ENST00000330796 LOC105371045A0A1W2PR82 267 aa25.32■■□□□ 1.64
PRMT3-201ENST00000330796 DCAF1Q9Y4B6 1507 aa25.31■■□□□ 1.64
PRMT3-201ENST00000330796 TRIM26Q12899 539 aaPredicted RBP24.97■■□□□ 1.59
PRMT3-201ENST00000330796 ABCC9O60706 1549 aa24.89■■□□□ 1.57
PRMT3-201ENST00000330796 RSF1Q96T23 1441 aaPredicted RBP24.73■■□□□ 1.55
PRMT3-201ENST00000330796 SCRIBQ14160 1630 aa24.66■■□□□ 1.54
PRMT3-201ENST00000330796 TRIM41Q8WV44 630 aa24.64■■□□□ 1.54
PRMT3-201ENST00000330796 FAM9AQ8IZU1 332 aaPredicted RBP24.58■■□□□ 1.52
PRMT3-201ENST00000330796 RB1CC1Q8TDY2 1594 aa24.57■■□□□ 1.52
PRMT3-201ENST00000330796 ZEB1P37275 1124 aaPredicted RBP24.54■■□□□ 1.52
PRMT3-201ENST00000330796 EHMT2Q96KQ7 1210 aa24.44■■□□□ 1.5
PRMT3-201ENST00000330796 CECR2Q9BXF3 1484 aa24.24■■□□□ 1.47
PRMT3-201ENST00000330796 SCAF1Q9H7N4 1312 aaKnown RBP24.18■■□□□ 1.46
PRMT3-201ENST00000330796 MROH2BQ7Z745 1585 aa24.17■■□□□ 1.46
PRMT3-201ENST00000330796 WIZO95785 1651 aa24.08■■□□□ 1.45
PRMT3-201ENST00000330796 NACADO15069 1562 aa24■■□□□ 1.43
PRMT3-201ENST00000330796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24■■□□□ 1.43
PRMT3-201ENST00000330796 PELP1Q8IZL8 1130 aaKnown RBP23.99■■□□□ 1.43
PRMT3-201ENST00000330796 CCER1Q8TC90 406 aaPredicted RBP23.9■■□□□ 1.42
PRMT3-201ENST00000330796 EIF4G1Q04637 1599 aaKnown RBP23.88■■□□□ 1.41
PRMT3-201ENST00000330796 BAZ1AQ9NRL2 1556 aaPredicted RBP23.88■■□□□ 1.41
PRMT3-201ENST00000330796 ACIN1Q9UKV3 1341 aaKnown RBP23.75■■□□□ 1.39
PRMT3-201ENST00000330796 TTBK1Q5TCY1 1321 aaPredicted RBP23.75■■□□□ 1.39
PRMT3-201ENST00000330796 NEUROD1Q13562 356 aa23.74■■□□□ 1.39
PRMT3-201ENST00000330796 ABCC8Q09428 1581 aa23.73■■□□□ 1.39
PRMT3-201ENST00000330796 CCDC88BA6NC98 1476 aa23.7■■□□□ 1.38
PRMT3-201ENST00000330796 DIEXFQ68CQ4 756 aaKnown RBP23.67■■□□□ 1.38
PRMT3-201ENST00000330796 WRNQ14191 1432 aaPredicted RBP eCLIP23.66■■□□□ 1.38
PRMT3-201ENST00000330796 CEP162Q5TB80 1403 aa23.63■■□□□ 1.37
PRMT3-201ENST00000330796 TOP2AP11388 1531 aaKnown RBP23.62■■□□□ 1.37
PRMT3-201ENST00000330796 SOGA1O94964 1423 aa23.59■■□□□ 1.37
PRMT3-201ENST00000330796 SMARCA2P51531 1590 aa23.55■■□□□ 1.36
PRMT3-201ENST00000330796 GTF3C3Q9Y5Q9 886 aa23.53■■□□□ 1.36
PRMT3-201ENST00000330796 TNIKQ9UKE5 1360 aa23.51■■□□□ 1.35
PRMT3-201ENST00000330796 SMARCA4P51532 1647 aa23.51■■□□□ 1.35
PRMT3-201ENST00000330796 CENPBP07199 599 aaPredicted RBP23.49■■□□□ 1.35
PRMT3-201ENST00000330796 RUSC2Q8N2Y8 1516 aa23.48■■□□□ 1.35
PRMT3-201ENST00000330796 CSRNP3Q8WYN3 585 aa23.44■■□□□ 1.34
PRMT3-201ENST00000330796 UBTFP17480 764 aaKnown RBP23.43■■□□□ 1.34
PRMT3-201ENST00000330796 EEA1Q15075 1411 aa23.37■■□□□ 1.33
PRMT3-201ENST00000330796 ZNF316A6NFI3 1004 aaPredicted RBP23.35■■□□□ 1.33
PRMT3-201ENST00000330796 GOLGA3Q08378 1498 aa23.3■■□□□ 1.32
PRMT3-201ENST00000330796 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
PRMT3-201ENST00000330796 YTHDC1Q96MU7 727 aaKnown RBP23.22■■□□□ 1.31
PRMT3-201ENST00000330796 HNRNPUL2Q1KMD3 747 aaKnown RBP23.21■■□□□ 1.31
PRMT3-201ENST00000330796 MIER1Q8N108 512 aa23.15■■□□□ 1.3
PRMT3-201ENST00000330796 CEP164Q9UPV0 1460 aa23.12■■□□□ 1.29
PRMT3-201ENST00000330796 SYNJ1O43426 1573 aa23.11■■□□□ 1.29
PRMT3-201ENST00000330796 CLIP1P30622 1438 aa23.1■■□□□ 1.29
PRMT3-201ENST00000330796 KIF21BO75037 1637 aa23.08■■□□□ 1.28
PRMT3-201ENST00000330796 PABPN1Q86U42 306 aaKnown RBP eCLIP23.08■■□□□ 1.28
PRMT3-201ENST00000330796 VPS8Q8N3P4 1428 aa23.03■■□□□ 1.28
PRMT3-201ENST00000330796 BICRAQ9NZM4 1560 aa22.98■■□□□ 1.27
PRMT3-201ENST00000330796 RANGAP1P46060 587 aaPredicted RBP22.98■■□□□ 1.27
PRMT3-201ENST00000330796 PEG3Q9GZU2 1588 aa22.97■■□□□ 1.27
PRMT3-201ENST00000330796 RAPGEF2Q9Y4G8 1499 aa22.97■■□□□ 1.27
PRMT3-201ENST00000330796 APLP2Q06481 763 aa22.94■■□□□ 1.26
PRMT3-201ENST00000330796 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
PRMT3-201ENST00000330796 MYT1Q01538 1121 aa22.83■■□□□ 1.25
PRMT3-201ENST00000330796 ATAD2BQ9ULI0 1458 aa22.82■■□□□ 1.24
PRMT3-201ENST00000330796 DHX57Q6P158 1386 aaKnown RBP22.76■■□□□ 1.23
PRMT3-201ENST00000330796 TOP2BQ02880 1626 aa22.72■■□□□ 1.23
PRMT3-201ENST00000330796 KANK4Q5T7N3 995 aaPredicted RBP22.69■■□□□ 1.22
PRMT3-201ENST00000330796 ARAP1Q96P48 1450 aa22.69■■□□□ 1.22
PRMT3-201ENST00000330796 CLSPNQ9HAW4 1339 aa22.69■■□□□ 1.22
PRMT3-201ENST00000330796 PRXQ9BXM0 1461 aa22.63■■□□□ 1.21
PRMT3-201ENST00000330796 ERICH3Q5RHP9 1530 aa22.62■■□□□ 1.21
PRMT3-201ENST00000330796 BIVM-ERCC5R4GMW8 1640 aa22.61■■□□□ 1.21
PRMT3-201ENST00000330796 SUPT16HQ9Y5B9 1047 aaKnown RBP22.55■■□□□ 1.2
PRMT3-201ENST00000330796 RRBP1Q9P2E9 1410 aaKnown RBP22.54■■□□□ 1.2
PRMT3-201ENST00000330796 CUX1P39880 1505 aa22.46■■□□□ 1.19
PRMT3-201ENST00000330796 CUX2O14529 1486 aa22.46■■□□□ 1.19
PRMT3-201ENST00000330796 ITGAEP38570 1179 aa22.46■■□□□ 1.19
PRMT3-201ENST00000330796 CCNB3Q8WWL7 1395 aa22.45■■□□□ 1.18
PRMT3-201ENST00000330796 KIF27Q86VH2 1401 aa22.42■■□□□ 1.18
PRMT3-201ENST00000330796 ARHGAP35Q9NRY4 1499 aa22.42■■□□□ 1.18
PRMT3-201ENST00000330796 KCNH8Q96L42 1107 aa22.38■■□□□ 1.17
PRMT3-201ENST00000330796 RAB3GAP2Q9H2M9 1393 aa22.34■■□□□ 1.17
PRMT3-201ENST00000330796 MAPKBP1O60336 1514 aa22.32■■□□□ 1.16
PRMT3-201ENST00000330796 TSHZ2Q9NRE2 1034 aa22.3■■□□□ 1.16
PRMT3-201ENST00000330796 HMGXB3Q12766 1538 aa22.25■■□□□ 1.15
PRMT3-201ENST00000330796 NCAPD3P42695 1498 aa22.25■■□□□ 1.15
PRMT3-201ENST00000330796 CFTRP13569 1480 aa22.22■■□□□ 1.15
PRMT3-201ENST00000330796 TIAM1Q13009 1591 aa22.22■■□□□ 1.15
PRMT3-201ENST00000330796 SETD5Q9C0A6 1442 aa22.19■■□□□ 1.14
PRMT3-201ENST00000330796 SIN3AQ96ST3 1273 aa22.19■■□□□ 1.14
PRMT3-201ENST00000330796 IGF1RP08069 1367 aa22.18■■□□□ 1.14
PRMT3-201ENST00000330796 WDR97A6NE52 1622 aa22.18■■□□□ 1.14
PRMT3-201ENST00000330796 DDX10Q13206 875 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms