RNA–Protein interactions for RNA: ENST00000330317.6

WDR4-201, Transcript of WD repeat domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene WDR4, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR4-201ENST00000330317 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.11■□□□□ 0.492e-6■■■■■ 207.5
WDR4-201ENST00000330317 EIF4G2P78344 907 aaKnown RBP eCLIP23.81■■□□□ 1.49e-8■■■■■ 197.4
WDR4-201ENST00000330317 SF3B1O75533 1304 aaKnown RBP eCLIP18.1■□□□□ 0.493e-6■■■■■ 129.9
WDR4-201ENST00000330317 DKC1O60832 514 aaKnown RBP eCLIP18.89■□□□□ 0.612e-8■■■■■ 89.1
WDR4-201ENST00000330317 AATFQ9NY61 560 aaKnown RBP eCLIP20.32■□□□□ 0.844e-10■■■■■ 87.1
WDR4-201ENST00000330317 TARDBPQ13148 414 aaKnown RBP eCLIP16.11■□□□□ 0.171e-7■■■■■ 73.8
WDR4-201ENST00000330317 SUB1P53999 127 aaKnown RBP eCLIP13.14□□□□□ -0.317e-10■■■■■ 52
WDR4-201ENST00000330317 DDX6P26196 483 aaKnown RBP eCLIP17.64■□□□□ 0.415e-6■■■■■ 46.6
WDR4-201ENST00000330317 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.72■□□□□ 0.279e-12■■■■■ 45.1
WDR4-201ENST00000330317 RBM5P52756 815 aaKnown RBP eCLIP20.31■□□□□ 0.841e-12■■■■■ 44.4
WDR4-201ENST00000330317 HNRNPMP52272 730 aaKnown RBP eCLIP25.79■■□□□ 1.724e-7■■■■■ 44.4
WDR4-201ENST00000330317 TIAL1Q01085 375 aaKnown RBP eCLIP16.59■□□□□ 0.253e-7■■■■■ 43.3
WDR4-201ENST00000330317 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.43■□□□□ 0.862e-7■■■■■ 41.6
WDR4-201ENST00000330317 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.94■□□□□ 0.146e-6■■■■■ 38.3
WDR4-201ENST00000330317 SRSF7Q16629 238 aaKnown RBP eCLIP13.87□□□□□ -0.192e-8■■■■■ 36.1
WDR4-201ENST00000330317 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.03■□□□□ 0.641e-7■■■■■ 36
WDR4-201ENST00000330317 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.36■□□□□ 0.379e-7■■■■■ 33.6
WDR4-201ENST00000330317 EFTUD2Q15029 972 aaKnown RBP eCLIP16.68■□□□□ 0.262e-7■■■■■ 32.7
WDR4-201ENST00000330317 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.89■□□□□ 0.292e-11■■■■■ 30.3
WDR4-201ENST00000330317 SRSF1Q07955 248 aaKnown RBP eCLIP14.84□□□□□ -0.032e-8■■■■■ 29.9
WDR4-201ENST00000330317 ZRANB2O95218 330 aaKnown RBP eCLIP17.39■□□□□ 0.376e-7■■■■■ 29.7
WDR4-201ENST00000330317 SF3B4Q15427 424 aaKnown RBP eCLIP15.08■□□□□ 0.011e-6■■■■□ 26.6
WDR4-201ENST00000330317 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.14■□□□□ 0.172e-11■■■■□ 26.5
WDR4-201ENST00000330317 AQRO60306 1485 aaKnown RBP eCLIP28.34■■■□□ 2.135e-7■■■■□ 26.1
WDR4-201ENST00000330317 PCBP2Q15366 365 aaKnown RBP eCLIP16.3■□□□□ 0.22e-6■■■■□ 26.1
WDR4-201ENST00000330317 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.04■□□□□ 0.83e-7■■■■□ 25.4
WDR4-201ENST00000330317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.37■■□□□ 1.172e-6■■■■□ 24.8
WDR4-201ENST00000330317 FMR1Q06787 632 aaKnown RBP eCLIP20.02■□□□□ 0.86e-7■■■■□ 24.7
WDR4-201ENST00000330317 RBM22Q9NW64 420 aaKnown RBP eCLIP17.15■□□□□ 0.347e-6■■■■□ 24.6
WDR4-201ENST00000330317 RBM15Q96T37 977 aaKnown RBP eCLIP17.05■□□□□ 0.324e-8■■■■□ 24.2
WDR4-201ENST00000330317 MATR3P43243 847 aaKnown RBP eCLIP18.41■□□□□ 0.549e-7■■■■□ 24.1
WDR4-201ENST00000330317 SMNDC1O75940 238 aaKnown RBP eCLIP14.94□□□□□ -0.021e-6■■■■□ 23
WDR4-201ENST00000330317 TAF15Q92804 592 aaKnown RBP eCLIP13.34□□□□□ -0.273e-6■■■■□ 23
WDR4-201ENST00000330317 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.43■□□□□ 0.79e-7■■■■□ 22.5
WDR4-201ENST00000330317 ILF3Q12906 894 aaKnown RBP eCLIP16.56■□□□□ 0.242e-6■■■■□ 21.5
WDR4-201ENST00000330317 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.93□□□□□ -0.181e-9■■■■□ 20.8
WDR4-201ENST00000330317 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.02■□□□□ 0.483e-7■■■■□ 20.1
WDR4-201ENST00000330317 AGGF1Q8N302 714 aaeCLIP16.9■□□□□ 0.32e-7■■■■□ 20.1
WDR4-201ENST00000330317 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.98□□□□□ -0.177e-7■■■■□ 19.6
WDR4-201ENST00000330317 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.39■□□□□ 0.543e-8■■■■□ 19.5
WDR4-201ENST00000330317 HNRNPCP07910 306 aaKnown RBP eCLIP13.73□□□□□ -0.211e-6■■■■□ 19.4
WDR4-201ENST00000330317 GTF2F1P35269 517 aaKnown RBP eCLIP17.84■□□□□ 0.452e-6■■■□□ 19.1
WDR4-201ENST00000330317 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.59■□□□□ 0.411e-7■■■□□ 18.6
WDR4-201ENST00000330317 PABPC4Q13310 644 aaKnown RBP eCLIP19.63■□□□□ 0.736e-11■■■□□ 18.3
WDR4-201ENST00000330317 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.45■□□□□ 0.062e-6■■■□□ 16.6
WDR4-201ENST00000330317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.34■■□□□ 1.814e-7■■■□□ 16.5
WDR4-201ENST00000330317 NONOQ15233 471 aaKnown RBP eCLIP19.27■□□□□ 0.672e-7■■■□□ 16.5
WDR4-201ENST00000330317 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.87■■□□□ 1.737e-6■■■□□ 16.5
WDR4-201ENST00000330317 AARSP49588 968 aaKnown RBP eCLIP18.15■□□□□ 0.52e-6■■■□□ 16.1
WDR4-201ENST00000330317 PPIGQ13427 754 aaKnown RBP eCLIP18.46■□□□□ 0.542e-7■■■□□ 15.9
WDR4-201ENST00000330317 ZNF622Q969S3 477 aaKnown RBP eCLIP20.99■□□□□ 0.953e-6■■■□□ 15.9
WDR4-201ENST00000330317 HNRNPLP14866 589 aaKnown RBP eCLIP17.19■□□□□ 0.347e-7■■■□□ 15.7
WDR4-201ENST00000330317 NCBP2P52298 156 aaKnown RBP eCLIP15.77■□□□□ 0.112e-6■■■□□ 15.5
WDR4-201ENST00000330317 TROVE2P10155 538 aaKnown RBP eCLIP16.22■□□□□ 0.194e-8■■■□□ 15
WDR4-201ENST00000330317 KHSRPQ92945 711 aaKnown RBP eCLIP17.71■□□□□ 0.437e-8■■■□□ 14.8
WDR4-201ENST00000330317 LSM11P83369 360 aaKnown RBP eCLIP15.17■□□□□ 0.025e-6■■■□□ 14.6
WDR4-201ENST00000330317 FUSP35637 526 aaKnown RBP eCLIP10.95□□□□□ -0.662e-6■■■□□ 14.6
WDR4-201ENST00000330317 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.15■■□□□ 1.37e-7■■□□□ 14.5
WDR4-201ENST00000330317 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.01■□□□□ 0.795e-6■■□□□ 13.8
WDR4-201ENST00000330317 ZC3H11AO75152 810 aaKnown RBP eCLIP18.19■□□□□ 0.57e-6■■□□□ 13.7
WDR4-201ENST00000330317 PRPF4O43172 522 aaKnown RBP eCLIP16.45■□□□□ 0.224e-7■■□□□ 13.5
WDR4-201ENST00000330317 PCBP1Q15365 356 aaKnown RBP eCLIP18.56■□□□□ 0.569e-6■■□□□ 13.3
WDR4-201ENST00000330317 SF3A3Q12874 501 aaKnown RBP eCLIP16.15■□□□□ 0.187e-7■■□□□ 12.9
WDR4-201ENST00000330317 EIF3DO15371 548 aaKnown RBP eCLIP18.58■□□□□ 0.564e-6■■□□□ 12.7
WDR4-201ENST00000330317 YBX3P16989 372 aaKnown RBP eCLIP20.79■□□□□ 0.922e-10■■□□□ 12.4
WDR4-201ENST00000330317 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.45■□□□□ 0.386e-7■■□□□ 12.3
WDR4-201ENST00000330317 HNRNPKP61978 463 aaKnown RBP eCLIP16.58■□□□□ 0.242e-6■■□□□ 12.3
WDR4-201ENST00000330317 EWSR1Q01844 656 aaKnown RBP eCLIP13.23□□□□□ -0.291e-6■■□□□ 12.2
WDR4-201ENST00000330317 RBFOX2O43251 390 aaKnown RBP eCLIP13.5□□□□□ -0.251e-16■■□□□ 12
WDR4-201ENST00000330317 PTBP1P26599 531 aaKnown RBP eCLIP14.23□□□□□ -0.135e-7■□□□□ 11.2
WDR4-201ENST00000330317 NKRFO15226 690 aaKnown RBP eCLIP19.07■□□□□ 0.642e-10■□□□□ 10.9
WDR4-201ENST00000330317 UPF1Q92900 1129 aaKnown RBP eCLIP21.81■■□□□ 1.082e-12■□□□□ 10
WDR4-201ENST00000330317 SFPQP23246 707 aaKnown RBP eCLIP18.54■□□□□ 0.568e-9■□□□□ 9.8
WDR4-201ENST00000330317 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.84□□□□□ -0.036e-8■□□□□ 9
WDR4-201ENST00000330317 AKAP1Q92667 903 aaKnown RBP eCLIP14.49□□□□□ -0.096e-10■□□□□ 8.9
WDR4-201ENST00000330317 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.96■□□□□ 0.473e-6■□□□□ 8.4
WDR4-201ENST00000330317 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.9■□□□□ 0.147e-7■□□□□ 8.2
Retrieved 77 of 77 RNA–protein pairs in 13.3 ms