RNA–Protein interactions for RNA: ENST00000329286.6

RAB12-201, Transcript of RAB12, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB12, Length 2,137 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB12-201ENST00000329286 PUM2Q8TB72 1066 aaKnown RBP eCLIP29.89■■■□□ 2.382e-20■■■□□ 16.4
RAB12-201ENST00000329286 LSM11P83369 360 aaKnown RBP eCLIP29.28■■■□□ 2.281e-16■■■■□ 21.2
RAB12-201ENST00000329286 TARDBPQ13148 414 aaKnown RBP eCLIP29.38■■■□□ 2.299e-16■■■■■ 51.6
RAB12-201ENST00000329286 FUBP3Q96I24 572 aaKnown RBP eCLIP31.22■■■□□ 2.597e-13■■■□□ 19.2
RAB12-201ENST00000329286 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.03■■■□□ 2.566e-11■■■□□ 18.9
RAB12-201ENST00000329286 SF3B4Q15427 424 aaKnown RBP eCLIP28.94■■■□□ 2.227e-11■■■□□ 16.9
RAB12-201ENST00000329286 DDX3XO00571 662 aaKnown RBP eCLIP33.91■■■■□ 3.022e-10■■■■■ 46.2
RAB12-201ENST00000329286 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.83■■■□□ 2.851e-9■■■■■ 31.9
RAB12-201ENST00000329286 LIN28BQ6ZN17 250 aaKnown RBP eCLIP30.4■■■□□ 2.463e-9■■■■□ 20.7
RAB12-201ENST00000329286 DDX6P26196 483 aaKnown RBP eCLIP29.93■■■□□ 2.384e-9■□□□□ 8.1
RAB12-201ENST00000329286 HNRNPMP52272 730 aaKnown RBP eCLIP42.83■■■■■ 4.455e-9■■■■□ 22.8
RAB12-201ENST00000329286 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP27.33■■□□□ 1.977e-9■■□□□ 13.3
RAB12-201ENST00000329286 QKIQ96PU8 341 aaKnown RBP eCLIP32.2■■■□□ 2.742e-8■■□□□ 11.8
RAB12-201ENST00000329286 EFTUD2Q15029 972 aaKnown RBP eCLIP32.56■■■□□ 2.83e-8■■■■□ 20.7
RAB12-201ENST00000329286 NONOQ15233 471 aaKnown RBP eCLIP34.93■■■■□ 3.185e-8■■□□□ 11.4
RAB12-201ENST00000329286 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP35.39■■■■□ 3.266e-8■□□□□ 9.1
RAB12-201ENST00000329286 SMNDC1O75940 238 aaKnown RBP eCLIP31.88■■■□□ 2.691e-7■■■□□ 15.1
RAB12-201ENST00000329286 SUB1P53999 127 aaKnown RBP eCLIP25.07■■□□□ 1.61e-7■■■■□ 20.1
RAB12-201ENST00000329286 XPO5Q9HAV4 1204 aaKnown RBP eCLIP33.95■■■■□ 3.031e-7■■■■□ 23.2
RAB12-201ENST00000329286 RPS3P23396 243 aaKnown RBP eCLIP30.62■■■□□ 2.491e-7■■□□□ 12.8
RAB12-201ENST00000329286 KHSRPQ92945 711 aaKnown RBP eCLIP32.33■■■□□ 2.771e-7■■■□□ 17.8
RAB12-201ENST00000329286 PPIGQ13427 754 aaKnown RBP eCLIP29.83■■■□□ 2.374e-7■□□□□ 11.3
RAB12-201ENST00000329286 HNRNPLP14866 589 aaKnown RBP eCLIP31.3■■■□□ 2.66e-7■■□□□ 12.3
RAB12-201ENST00000329286 ZC3H11AO75152 810 aaKnown RBP eCLIP33.3■■■□□ 2.927e-7■■■■■ 38.6
RAB12-201ENST00000329286 UTP3Q9NQZ2 479 aaKnown RBP eCLIP33.43■■■□□ 2.948e-7■■■■■ 27.9
RAB12-201ENST00000329286 PRPF4O43172 522 aaKnown RBP eCLIP32.71■■■□□ 2.831e-6■■■■□ 22.4
RAB12-201ENST00000329286 SF3B1O75533 1304 aaKnown RBP eCLIP32.01■■■□□ 2.712e-6■■■■■ 85
RAB12-201ENST00000329286 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP42.64■■■■■ 4.422e-6■■■■□ 21.2
RAB12-201ENST00000329286 RBFOX2O43251 390 aaKnown RBP eCLIP25.76■■□□□ 1.712e-6■□□□□ 9.3
RAB12-201ENST00000329286 TBRG4Q969Z0 631 aaKnown RBP eCLIP30.91■■■□□ 2.542e-6■■■■□ 23.5
RAB12-201ENST00000329286 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP32.87■■■□□ 2.853e-6■□□□□ 8.7
RAB12-201ENST00000329286 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP37.39■■■■□ 3.583e-6■□□□□ 9.5
RAB12-201ENST00000329286 ZNF622Q969S3 477 aaKnown RBP eCLIP34.13■■■■□ 3.053e-6■■■■□ 24.2
RAB12-201ENST00000329286 PABPN1Q86U42 306 aaKnown RBP eCLIP49.07■■■■■ 5.455e-6■■■■□ 22.2
RAB12-201ENST00000329286 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP23.33■■□□□ 1.325e-6■■□□□ 13.4
Retrieved 35 of 35 RNA–protein pairs in 3.5 ms