RNA–Protein interactions for RNA: ENST00000329117.9

BCAN-201, Transcript of brevican, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCAN, Length 3,466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAN-201ENST00000329117 NISCHQ9Y2I1 1504 aa26.13■■□□□ 1.77
BCAN-201ENST00000329117 SHROOM4Q9ULL8 1493 aa24■■□□□ 1.43
BCAN-201ENST00000329117 SUPT5HO00267 1087 aaKnown RBP23.98■■□□□ 1.43
BCAN-201ENST00000329117 PELP1Q8IZL8 1130 aaKnown RBP23.78■■□□□ 1.4
BCAN-201ENST00000329117 HRCP23327 699 aa23.58■■□□□ 1.36
BCAN-201ENST00000329117 PCGF6Q9BYE7 350 aa23.56■■□□□ 1.36
BCAN-201ENST00000329117 PPARGC1BQ86YN6 1023 aaKnown RBP23.52■■□□□ 1.36
BCAN-201ENST00000329117 DCAF8L2P0C7V8 631 aa23.11■■□□□ 1.29
BCAN-201ENST00000329117 CHIC1Q5VXU3 224 aa23.06■■□□□ 1.28
BCAN-201ENST00000329117 MYT1Q01538 1121 aa23■■□□□ 1.27
BCAN-201ENST00000329117 SCAF1Q9H7N4 1312 aaKnown RBP22.93■■□□□ 1.26
BCAN-201ENST00000329117 MYO15BQ96JP2 1530 aa22.91■■□□□ 1.26
BCAN-201ENST00000329117 LOC105371045A0A1W2PR82 267 aa22.83■■□□□ 1.24
BCAN-201ENST00000329117 EHMT2Q96KQ7 1210 aa22.52■■□□□ 1.2
BCAN-201ENST00000329117 TRIM26Q12899 539 aaPredicted RBP22.52■■□□□ 1.2
BCAN-201ENST00000329117 FAM9AQ8IZU1 332 aaPredicted RBP22.33■■□□□ 1.16
BCAN-201ENST00000329117 PRKCSHP14314 528 aaPredicted RBP22.27■■□□□ 1.16
BCAN-201ENST00000329117 ZEB1P37275 1124 aaPredicted RBP22.25■■□□□ 1.15
BCAN-201ENST00000329117 BCL11AQ9H165 835 aa22.24■■□□□ 1.15
BCAN-201ENST00000329117 DCAF1Q9Y4B6 1507 aa22.23■■□□□ 1.15
BCAN-201ENST00000329117 ZCCHC6Q5VYS8 1495 aaKnown RBP22.1■■□□□ 1.13
BCAN-201ENST00000329117 GTF3C3Q9Y5Q9 886 aa22.08■■□□□ 1.12
BCAN-201ENST00000329117 TRIM41Q8WV44 630 aa22■■□□□ 1.11
BCAN-201ENST00000329117 NEUROD1Q13562 356 aa21.97■■□□□ 1.11
BCAN-201ENST00000329117 TTBK1Q5TCY1 1321 aaPredicted RBP21.9■■□□□ 1.1
BCAN-201ENST00000329117 CCER1Q8TC90 406 aaPredicted RBP21.89■■□□□ 1.09
BCAN-201ENST00000329117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.87■■□□□ 1.09
BCAN-201ENST00000329117 CCDC180Q9P1Z9 1646 aa21.81■■□□□ 1.08
BCAN-201ENST00000329117 ACIN1Q9UKV3 1341 aaKnown RBP21.81■■□□□ 1.08
BCAN-201ENST00000329117 CENPBP07199 599 aaPredicted RBP21.76■■□□□ 1.07
BCAN-201ENST00000329117 YTHDC1Q96MU7 727 aaKnown RBP21.7■■□□□ 1.06
BCAN-201ENST00000329117 DIEXFQ68CQ4 756 aaKnown RBP21.67■■□□□ 1.06
BCAN-201ENST00000329117 CSRNP3Q8WYN3 585 aa21.36■■□□□ 1.01
BCAN-201ENST00000329117 ERICH6Q7L0X2 663 aa21.23■□□□□ 0.99
BCAN-201ENST00000329117 ANP32EQ9BTT0 268 aa21.2■□□□□ 0.98
BCAN-201ENST00000329117 RSF1Q96T23 1441 aaPredicted RBP21.17■□□□□ 0.98
BCAN-201ENST00000329117 ZNF316A6NFI3 1004 aaPredicted RBP21.17■□□□□ 0.98
BCAN-201ENST00000329117 HNRNPUL2Q1KMD3 747 aaKnown RBP21.1■□□□□ 0.97
BCAN-201ENST00000329117 MIER1Q8N108 512 aa21.09■□□□□ 0.97
BCAN-201ENST00000329117 UBTFP17480 764 aaKnown RBP21.06■□□□□ 0.96
BCAN-201ENST00000329117 ANO8Q9HCE9 1232 aaPredicted RBP21.02■□□□□ 0.96
BCAN-201ENST00000329117 RB1CC1Q8TDY2 1594 aa21.01■□□□□ 0.95
BCAN-201ENST00000329117 RANGAP1P46060 587 aaPredicted RBP20.97■□□□□ 0.95
BCAN-201ENST00000329117 SCRIBQ14160 1630 aa20.96■□□□□ 0.95
BCAN-201ENST00000329117 ABCC9O60706 1549 aa20.92■□□□□ 0.94
BCAN-201ENST00000329117 APLP2Q06481 763 aa20.88■□□□□ 0.93
BCAN-201ENST00000329117 CCDC136Q96JN2 1154 aa20.88■□□□□ 0.93
BCAN-201ENST00000329117 CECR2Q9BXF3 1484 aa20.7■□□□□ 0.9
BCAN-201ENST00000329117 BCANQ96GW7 911 aa20.7■□□□□ 0.9
BCAN-201ENST00000329117 CEP162Q5TB80 1403 aa20.69■□□□□ 0.9
BCAN-201ENST00000329117 TSHZ2Q9NRE2 1034 aa20.66■□□□□ 0.9
BCAN-201ENST00000329117 SUPT16HQ9Y5B9 1047 aaKnown RBP20.62■□□□□ 0.89
BCAN-201ENST00000329117 SALL2Q9Y467 1007 aaPredicted RBP20.56■□□□□ 0.88
BCAN-201ENST00000329117 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.56■□□□□ 0.88
BCAN-201ENST00000329117 MROH2BQ7Z745 1585 aa20.54■□□□□ 0.88
BCAN-201ENST00000329117 SOGA1O94964 1423 aa20.52■□□□□ 0.88
BCAN-201ENST00000329117 CCDC88BA6NC98 1476 aa20.49■□□□□ 0.87
BCAN-201ENST00000329117 ITGAEP38570 1179 aa20.47■□□□□ 0.87
BCAN-201ENST00000329117 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
BCAN-201ENST00000329117 TNIKQ9UKE5 1360 aa20.45■□□□□ 0.86
BCAN-201ENST00000329117 RTN4Q9NQC3 1192 aaKnown RBP20.44■□□□□ 0.86
BCAN-201ENST00000329117 WRNQ14191 1432 aaPredicted RBP eCLIP20.44■□□□□ 0.86
BCAN-201ENST00000329117 PLEKHG5O94827 1062 aa20.42■□□□□ 0.86
BCAN-201ENST00000329117 WIZO95785 1651 aa20.41■□□□□ 0.86
BCAN-201ENST00000329117 FKBP8Q14318 412 aa20.37■□□□□ 0.85
BCAN-201ENST00000329117 RUSC2Q8N2Y8 1516 aa20.35■□□□□ 0.85
BCAN-201ENST00000329117 KCNH8Q96L42 1107 aa20.33■□□□□ 0.85
BCAN-201ENST00000329117 NEFLP07196 543 aa20.32■□□□□ 0.84
BCAN-201ENST00000329117 CLSPNQ9HAW4 1339 aa20.29■□□□□ 0.84
BCAN-201ENST00000329117 EIF5BO60841 1220 aaKnown RBP20.29■□□□□ 0.84
BCAN-201ENST00000329117 CLIP1P30622 1438 aa20.24■□□□□ 0.83
BCAN-201ENST00000329117 GOLGA3Q08378 1498 aa20.22■□□□□ 0.83
BCAN-201ENST00000329117 DDX10Q13206 875 aaKnown RBP20.2■□□□□ 0.82
BCAN-201ENST00000329117 DEKP35659 375 aaKnown RBP20.18■□□□□ 0.82
BCAN-201ENST00000329117 TRIM52Q96A61 297 aa20.18■□□□□ 0.82
BCAN-201ENST00000329117 HIRIP3Q9BW71 556 aaPredicted RBP20.15■□□□□ 0.82
BCAN-201ENST00000329117 SLC24A1O60721 1099 aa20.13■□□□□ 0.81
BCAN-201ENST00000329117 RBM19Q9Y4C8 960 aaKnown RBP20.13■□□□□ 0.81
BCAN-201ENST00000329117 EEA1Q15075 1411 aa20.1■□□□□ 0.81
BCAN-201ENST00000329117 NBR1Q14596 966 aa20.09■□□□□ 0.81
BCAN-201ENST00000329117 MSH5O43196 834 aa20.07■□□□□ 0.8
BCAN-201ENST00000329117 DHX57Q6P158 1386 aaKnown RBP20.06■□□□□ 0.8
BCAN-201ENST00000329117 KANK4Q5T7N3 995 aaPredicted RBP20.03■□□□□ 0.8
BCAN-201ENST00000329117 BAZ1AQ9NRL2 1556 aaPredicted RBP20.03■□□□□ 0.8
BCAN-201ENST00000329117 PABPN1Q86U42 306 aaKnown RBP eCLIP20.03■□□□□ 0.8
BCAN-201ENST00000329117 VPS8Q8N3P4 1428 aa20.03■□□□□ 0.8
BCAN-201ENST00000329117 UBE2Q2Q8WVN8 375 aa20.02■□□□□ 0.8
BCAN-201ENST00000329117 IRX6P78412 446 aaPredicted RBP20.02■□□□□ 0.8
BCAN-201ENST00000329117 ATP1B4Q9UN42 357 aaPredicted RBP20.01■□□□□ 0.79
BCAN-201ENST00000329117 IL27Q8NEV9 243 aa19.98■□□□□ 0.79
BCAN-201ENST00000329117 CEP164Q9UPV0 1460 aa19.98■□□□□ 0.79
BCAN-201ENST00000329117 PKNOX2Q96KN3 472 aa19.95■□□□□ 0.78
BCAN-201ENST00000329117 ANP32CO43423 234 aa19.93■□□□□ 0.78
BCAN-201ENST00000329117 SIN3AQ96ST3 1273 aa19.93■□□□□ 0.78
BCAN-201ENST00000329117 FAM50AQ14320 339 aaKnown RBP19.92■□□□□ 0.78
BCAN-201ENST00000329117 PODXL2Q9NZ53 605 aa19.89■□□□□ 0.78
BCAN-201ENST00000329117 TOP2AP11388 1531 aaKnown RBP19.88■□□□□ 0.77
BCAN-201ENST00000329117 RAPGEF2Q9Y4G8 1499 aa19.88■□□□□ 0.77
BCAN-201ENST00000329117 NACADO15069 1562 aa19.88■□□□□ 0.77
BCAN-201ENST00000329117 EIF4G1Q04637 1599 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms