RNA–Protein interactions for RNA: ENST00000327827.11

C16orf72-201, Transcript of chromosome 16 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C16orf72, Length 5,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf72-201ENST00000327827 EIF3HO15372 352 aaKnown RBP eCLIP23.86■■□□□ 1.411e-31■□□□□ 8.5
C16orf72-201ENST00000327827 PTBP1P26599 531 aaKnown RBP eCLIP20.68■□□□□ 0.91e-18■■□□□ 14
C16orf72-201ENST00000327827 PCBP2Q15366 365 aaKnown RBP eCLIP22.24■■□□□ 1.155e-17■■■■□ 22.5
C16orf72-201ENST00000327827 ILF3Q12906 894 aaKnown RBP eCLIP22.09■■□□□ 1.132e-16■■□□□ 12.4
C16orf72-201ENST00000327827 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.87■□□□□ 0.292e-14■■□□□ 14.4
C16orf72-201ENST00000327827 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.59■■□□□ 1.052e-13■■■□□ 14.8
C16orf72-201ENST00000327827 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.31■■□□□ 1.325e-13■■■■■ 73
C16orf72-201ENST00000327827 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.63■■□□□ 1.211e-12■■■□□ 18.5
C16orf72-201ENST00000327827 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.59■■□□□ 1.372e-12■■□□□ 11.9
C16orf72-201ENST00000327827 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.19■□□□□ 0.982e-12■■■■□ 21.6
C16orf72-201ENST00000327827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.2■■■□□ 2.431e-11■■□□□ 11.5
C16orf72-201ENST00000327827 ZNF622Q969S3 477 aaKnown RBP eCLIP25.6■■□□□ 1.692e-11■■■□□ 15.4
C16orf72-201ENST00000327827 GRSF1Q12849 480 aaKnown RBP eCLIP22.17■■□□□ 1.141e-10■■■■□ 25.9
C16orf72-201ENST00000327827 DDX6P26196 483 aaKnown RBP eCLIP22.3■■□□□ 1.161e-10■■■□□ 16.2
C16orf72-201ENST00000327827 NKRFO15226 690 aaKnown RBP eCLIP22.73■■□□□ 1.232e-10■■■□□ 15.8
C16orf72-201ENST00000327827 DDX3XO00571 662 aaKnown RBP eCLIP23.01■■□□□ 1.272e-10■■□□□ 12.5
C16orf72-201ENST00000327827 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.99■■□□□ 1.752e-10■□□□□ 9.3
C16orf72-201ENST00000327827 RBFOX2O43251 390 aaKnown RBP eCLIP19.47■□□□□ 0.712e-10■□□□□ 8.4
C16orf72-201ENST00000327827 UPF1Q92900 1129 aaKnown RBP eCLIP22.17■■□□□ 1.143e-10■■■□□ 18.4
C16orf72-201ENST00000327827 AQRO60306 1485 aaKnown RBP eCLIP26.19■■□□□ 1.784e-10■■■■■ 36.9
C16orf72-201ENST00000327827 NCBP2P52298 156 aaKnown RBP eCLIP22.23■■□□□ 1.155e-10■■□□□ 13.1
C16orf72-201ENST00000327827 HNRNPKP61978 463 aaKnown RBP eCLIP21.58■■□□□ 1.045e-10■■■■■ 36.8
C16orf72-201ENST00000327827 SRSF1Q07955 248 aaKnown RBP eCLIP18.89■□□□□ 0.625e-10■■□□□ 11.9
C16orf72-201ENST00000327827 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.42■■□□□ 1.348e-10■■■□□ 18.6
C16orf72-201ENST00000327827 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.68■■□□□ 1.222e-9■■■■■ 104.4
C16orf72-201ENST00000327827 PRPF4O43172 522 aaKnown RBP eCLIP23.95■■□□□ 1.422e-9■■□□□ 13.4
C16orf72-201ENST00000327827 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.71■■□□□ 1.073e-9■■■□□ 15.4
C16orf72-201ENST00000327827 GTF2F1P35269 517 aaKnown RBP eCLIP26.34■■□□□ 1.813e-9■■■□□ 14.6
C16orf72-201ENST00000327827 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.68■■□□□ 1.73e-9■■□□□ 12.2
C16orf72-201ENST00000327827 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.09■■□□□ 1.455e-9■■□□□ 12
C16orf72-201ENST00000327827 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.45■■□□□ 1.665e-9■□□□□ 9.1
C16orf72-201ENST00000327827 ZRANB2O95218 330 aaKnown RBP eCLIP24.13■■□□□ 1.458e-9■□□□□ 8.3
C16orf72-201ENST00000327827 FMR1Q06787 632 aaKnown RBP eCLIP23.85■■□□□ 1.411e-8■□□□□ 9.7
C16orf72-201ENST00000327827 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.17■■□□□ 1.621e-8■□□□□ 9
C16orf72-201ENST00000327827 TIAL1Q01085 375 aaKnown RBP eCLIP20.32■□□□□ 0.842e-8■■■■■ 27.7
C16orf72-201ENST00000327827 TARDBPQ13148 414 aaKnown RBP eCLIP22.32■■□□□ 1.162e-8■■■■■ 27.1
C16orf72-201ENST00000327827 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.42■■□□□ 1.662e-8■□□□□ 9.9
C16orf72-201ENST00000327827 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.33■■□□□ 1.173e-8■■■■■ 27
C16orf72-201ENST00000327827 EFTUD2Q15029 972 aaKnown RBP eCLIP24.13■■□□□ 1.453e-8■■□□□ 14.1
C16orf72-201ENST00000327827 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.88■■□□□ 1.733e-8■■■□□ 14.7
C16orf72-201ENST00000327827 KHSRPQ92945 711 aaKnown RBP eCLIP21.09■□□□□ 0.973e-8■■■□□ 15.4
C16orf72-201ENST00000327827 METAP2P50579 478 aaKnown RBP eCLIP26■■□□□ 1.753e-8■□□□□ 10.2
C16orf72-201ENST00000327827 RBM22Q9NW64 420 aaKnown RBP eCLIP23.14■■□□□ 1.295e-8■■□□□ 13.2
C16orf72-201ENST00000327827 TIA1P31483 386 aaKnown RBP eCLIP21.65■■□□□ 1.065e-8■■■■□ 23.4
C16orf72-201ENST00000327827 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.21■■□□□ 1.956e-8■■■□□ 19.2
C16orf72-201ENST00000327827 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.6■■□□□ 1.057e-8■□□□□ 8.7
C16orf72-201ENST00000327827 MATR3P43243 847 aaKnown RBP eCLIP26.54■■□□□ 1.841e-7■■■■□ 19.8
C16orf72-201ENST00000327827 PUM1Q14671 1186 aaKnown RBP eCLIP22.27■■□□□ 1.162e-7■□□□□ 10
C16orf72-201ENST00000327827 RBM15Q96T37 977 aaKnown RBP eCLIP23.82■■□□□ 1.42e-7■■■■□ 21.9
C16orf72-201ENST00000327827 HNRNPCP07910 306 aaKnown RBP eCLIP24.02■■□□□ 1.442e-7■■□□□ 12.5
C16orf72-201ENST00000327827 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.35■■□□□ 1.813e-7■■□□□ 13.1
C16orf72-201ENST00000327827 AARSP49588 968 aaKnown RBP eCLIP24.07■■□□□ 1.443e-7■□□□□ 10.5
C16orf72-201ENST00000327827 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.72■■□□□ 1.874e-7■■□□□ 13.2
C16orf72-201ENST00000327827 FUBP3Q96I24 572 aaKnown RBP eCLIP21.82■■□□□ 1.085e-7■■□□□ 12.9
C16orf72-201ENST00000327827 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.08■■□□□ 1.617e-7■□□□□ 9.1
C16orf72-201ENST00000327827 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.8■■□□□ 1.247e-7■■■■□ 23.4
C16orf72-201ENST00000327827 HNRNPMP52272 730 aaKnown RBP eCLIP27.83■■■□□ 2.058e-7■■■■■ 31.7
C16orf72-201ENST00000327827 SF3B1O75533 1304 aaKnown RBP eCLIP22.94■■□□□ 1.268e-7■■■■■ 124.2
C16orf72-201ENST00000327827 IGF2BP3O00425 579 aaKnown RBP eCLIP23.77■■□□□ 1.41e-6■■□□□ 12.6
C16orf72-201ENST00000327827 CSTF2P33240 577 aaKnown RBP eCLIP22.22■■□□□ 1.151e-6■■■□□ 14.6
C16orf72-201ENST00000327827 FTOQ9C0B1 505 aaKnown RBP eCLIP24.63■■□□□ 1.531e-6■□□□□ 9.4
C16orf72-201ENST00000327827 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP21.08■□□□□ 0.962e-6■■■■■ 28.7
C16orf72-201ENST00000327827 YBX3P16989 372 aaKnown RBP eCLIP22.98■■□□□ 1.273e-6■■■□□ 16.6
C16orf72-201ENST00000327827 CPSF6Q16630 551 aaKnown RBP eCLIP22.72■■□□□ 1.235e-6■■□□□ 13.3
C16orf72-201ENST00000327827 SF3A3Q12874 501 aaKnown RBP eCLIP25.45■■□□□ 1.669e-6■■□□□ 12.4
Retrieved 65 of 65 RNA–protein pairs in 13.5 ms