RNA–Protein interactions for RNA: ENST00000327483.9

CBFA2T3-202, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBFA2T3, Length 4,033 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-202ENST00000327483 PTBP1P26599 531 aaKnown RBP eCLIP12.95□□□□□ -0.346e-85■■■■■ 29.4
CBFA2T3-202ENST00000327483 ILF3Q12906 894 aaKnown RBP eCLIP13.22□□□□□ -0.293e-10■■■■□ 25.8
CBFA2T3-202ENST00000327483 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.18□□□□□ -0.141e-9■■□□□ 12.9
CBFA2T3-202ENST00000327483 AQRO60306 1485 aaKnown RBP eCLIP17.8■□□□□ 0.449e-9■■■■■ 39
CBFA2T3-202ENST00000327483 YBX3P16989 372 aaKnown RBP eCLIP14.38□□□□□ -0.112e-8■■■■□ 22.2
CBFA2T3-202ENST00000327483 DDX21Q9NR30 783 aaKnown RBP eCLIP16.16■□□□□ 0.187e-8■■■■□ 24
CBFA2T3-202ENST00000327483 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.3□□□□□ -0.128e-8■■■■■ 61.9
CBFA2T3-202ENST00000327483 EWSR1Q01844 656 aaKnown RBP eCLIP12.42□□□□□ -0.421e-7■■■■□ 24.5
CBFA2T3-202ENST00000327483 EIF4G2P78344 907 aaKnown RBP eCLIP19.19■□□□□ 0.662e-7■■■■■ 62.5
CBFA2T3-202ENST00000327483 AGGF1Q8N302 714 aaeCLIP14.95□□□□□ -0.022e-7■■■■■ 55.1
CBFA2T3-202ENST00000327483 AKAP1Q92667 903 aaKnown RBP eCLIP13.55□□□□□ -0.242e-7■■■■□ 21.4
CBFA2T3-202ENST00000327483 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.14□□□□□ -0.472e-7■■□□□ 11.6
CBFA2T3-202ENST00000327483 ZNF622Q969S3 477 aaKnown RBP eCLIP15.59■□□□□ 0.092e-7■□□□□ 9.4
CBFA2T3-202ENST00000327483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.95■□□□□ 0.622e-7■■□□□ 13.3
CBFA2T3-202ENST00000327483 NOLC1Q14978 699 aaKnown RBP eCLIP16.86■□□□□ 0.292e-7■■■□□ 15.4
CBFA2T3-202ENST00000327483 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.58■□□□□ 0.083e-7■■■□□ 17.9
CBFA2T3-202ENST00000327483 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.49□□□□□ -0.413e-7■■■□□ 18.5
CBFA2T3-202ENST00000327483 TARDBPQ13148 414 aaKnown RBP eCLIP13.78□□□□□ -0.23e-7■■■□□ 17.9
CBFA2T3-202ENST00000327483 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.02□□□□□ -0.173e-7■■■□□ 16
CBFA2T3-202ENST00000327483 HNRNPLP14866 589 aaKnown RBP eCLIP14.51□□□□□ -0.094e-7■■■■■ 46.6
CBFA2T3-202ENST00000327483 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.85□□□□□ -0.035e-7■■■□□ 18.6
CBFA2T3-202ENST00000327483 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.22□□□□□ -0.135e-7■■■■□ 23.9
CBFA2T3-202ENST00000327483 HNRNPMP52272 730 aaKnown RBP eCLIP18.2■□□□□ 0.55e-7■■■■■ 39.5
CBFA2T3-202ENST00000327483 NIPBLQ6KC79 2804 aaeCLIP9.53□□□□□ -0.885e-7■■■■□ 21.4
CBFA2T3-202ENST00000327483 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.48□□□□□ -0.095e-7■■■■■ 42.6
CBFA2T3-202ENST00000327483 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.08■□□□□ 06e-7■■□□□ 11.4
CBFA2T3-202ENST00000327483 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.49□□□□□ -0.256e-7■■■■■ 39.7
CBFA2T3-202ENST00000327483 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.32□□□□□ -0.286e-7■■■■□ 23.2
CBFA2T3-202ENST00000327483 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.86■□□□□ 0.296e-7■■■□□ 17.1
CBFA2T3-202ENST00000327483 GTF2F1P35269 517 aaKnown RBP eCLIP16.67■□□□□ 0.267e-7■■■■□ 23.6
CBFA2T3-202ENST00000327483 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.86□□□□□ -0.357e-7■■■■■ 32
CBFA2T3-202ENST00000327483 UPF1Q92900 1129 aaKnown RBP eCLIP13.71□□□□□ -0.218e-7■■■■□ 21.1
CBFA2T3-202ENST00000327483 YWHAGP61981 247 aaKnown RBP eCLIP15.23■□□□□ 0.038e-7■■■■□ 20.6
CBFA2T3-202ENST00000327483 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.21■□□□□ 0.188e-7■■■□□ 16.2
CBFA2T3-202ENST00000327483 AATFQ9NY61 560 aaKnown RBP eCLIP15.84■□□□□ 0.139e-7■■■■■ 54.4
CBFA2T3-202ENST00000327483 NONOQ15233 471 aaKnown RBP eCLIP15.66■□□□□ 0.19e-7■■■■□ 22.9
CBFA2T3-202ENST00000327483 EFTUD2Q15029 972 aaKnown RBP eCLIP14.8□□□□□ -0.049e-7■■■□□ 17.7
CBFA2T3-202ENST00000327483 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.56■□□□□ 0.49e-7■■■■□ 26.2
CBFA2T3-202ENST00000327483 SRSF1Q07955 248 aaKnown RBP eCLIP11.25□□□□□ -0.611e-6■■□□□ 13.5
CBFA2T3-202ENST00000327483 PABPC4Q13310 644 aaKnown RBP eCLIP15.55■□□□□ 0.081e-6■□□□□ 10.3
CBFA2T3-202ENST00000327483 SF3B4Q15427 424 aaKnown RBP eCLIP13.78□□□□□ -0.21e-6■■■■□ 19.8
CBFA2T3-202ENST00000327483 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.83■□□□□ 0.121e-6■■■■■ 167.1
CBFA2T3-202ENST00000327483 PCBP1Q15365 356 aaKnown RBP eCLIP13.73□□□□□ -0.211e-6■■■□□ 15.1
CBFA2T3-202ENST00000327483 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.49□□□□□ -0.091e-6■■■■□ 22.9
CBFA2T3-202ENST00000327483 ZRANB2O95218 330 aaKnown RBP eCLIP15.54■□□□□ 0.081e-6■■■■■ 43.9
CBFA2T3-202ENST00000327483 RBM15Q96T37 977 aaKnown RBP eCLIP15.11■□□□□ 0.011e-6■■■□□ 16.1
CBFA2T3-202ENST00000327483 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.19■□□□□ 0.181e-6■■■■□ 21.3
CBFA2T3-202ENST00000327483 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.48□□□□□ -0.251e-6■■■■■ 56.7
CBFA2T3-202ENST00000327483 LSM11P83369 360 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■■■■□ 21.3
CBFA2T3-202ENST00000327483 SMNDC1O75940 238 aaKnown RBP eCLIP14.73□□□□□ -0.051e-6■■■■□ 22.9
CBFA2T3-202ENST00000327483 SF3B1O75533 1304 aaKnown RBP eCLIP14.18□□□□□ -0.141e-6■■■■■ 107.9
CBFA2T3-202ENST00000327483 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.05■□□□□ -01e-6■■■■□ 23.8
CBFA2T3-202ENST00000327483 TIA1P31483 386 aaKnown RBP eCLIP13.53□□□□□ -0.241e-6■■□□□ 11.4
CBFA2T3-202ENST00000327483 FUSP35637 526 aaKnown RBP eCLIP9.99□□□□□ -0.811e-6■■■□□ 14.6
CBFA2T3-202ENST00000327483 ZC3H11AO75152 810 aaKnown RBP eCLIP14.56□□□□□ -0.082e-6■□□□□ 9.6
CBFA2T3-202ENST00000327483 RPS3P23396 243 aaKnown RBP eCLIP13.7□□□□□ -0.222e-6■■□□□ 13.9
CBFA2T3-202ENST00000327483 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.31■□□□□ 0.042e-6■■■□□ 16.6
CBFA2T3-202ENST00000327483 RBFOX2O43251 390 aaKnown RBP eCLIP11.84□□□□□ -0.512e-6■■□□□ 12.4
CBFA2T3-202ENST00000327483 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.32■□□□□ 0.362e-6■■■■■ 44.1
CBFA2T3-202ENST00000327483 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.64□□□□□ -0.232e-6■■■■■ 36
CBFA2T3-202ENST00000327483 XRCC6P12956 609 aaKnown RBP eCLIP17.45■□□□□ 0.382e-6■■■□□ 18.8
CBFA2T3-202ENST00000327483 PUM1Q14671 1186 aaKnown RBP eCLIP13.33□□□□□ -0.282e-6■■■■□ 19.9
CBFA2T3-202ENST00000327483 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.33■□□□□ 0.212e-6■■□□□ 14.3
CBFA2T3-202ENST00000327483 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.41■□□□□ 0.062e-6■■■■□ 23.5
CBFA2T3-202ENST00000327483 METAP2P50579 478 aaKnown RBP eCLIP16.31■□□□□ 0.22e-6■■■□□ 18.3
CBFA2T3-202ENST00000327483 AARSP49588 968 aaKnown RBP eCLIP15.2■□□□□ 0.023e-6■■■■□ 25.4
CBFA2T3-202ENST00000327483 HNRNPKP61978 463 aaKnown RBP eCLIP12.67□□□□□ -0.383e-6■■■■□ 20.9
CBFA2T3-202ENST00000327483 WDR43Q15061 677 aaKnown RBP eCLIP18.74■□□□□ 0.593e-6■■■■□ 21.4
CBFA2T3-202ENST00000327483 WRNQ14191 1432 aaPredicted RBP eCLIP19.34■□□□□ 0.694e-6■■■■■ 37.6
CBFA2T3-202ENST00000327483 FTOQ9C0B1 505 aaKnown RBP eCLIP16.41■□□□□ 0.224e-6■■■■□ 21.5
CBFA2T3-202ENST00000327483 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.54■□□□□ 0.084e-6■■■■□ 24.6
CBFA2T3-202ENST00000327483 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.16□□□□□ -0.145e-6■■■■□ 22
CBFA2T3-202ENST00000327483 LARP4Q71RC2 724 aaKnown RBP eCLIP13.84□□□□□ -0.195e-6■□□□□ 10.3
CBFA2T3-202ENST00000327483 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.65□□□□□ -0.065e-6■■■■■ 81.8
CBFA2T3-202ENST00000327483 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.7■□□□□ 0.15e-6■■■□□ 17.2
CBFA2T3-202ENST00000327483 SRSF7Q16629 238 aaKnown RBP eCLIP11.6□□□□□ -0.556e-6■■■■□ 19.7
CBFA2T3-202ENST00000327483 DDX6P26196 483 aaKnown RBP eCLIP13.39□□□□□ -0.276e-6■■■■□ 22.8
CBFA2T3-202ENST00000327483 TAF15Q92804 592 aaKnown RBP eCLIP12.15□□□□□ -0.466e-6■■□□□ 12.5
CBFA2T3-202ENST00000327483 FMR1Q06787 632 aaKnown RBP eCLIP15.81■□□□□ 0.129e-6■■■■□ 20.6
Retrieved 79 of 79 RNA–protein pairs in 22.2 ms