RNA–Protein interactions for RNA: ENST00000325844.8

MRPS11-201, Transcript of mitochondrial ribosomal protein S11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS11, Length 3,644 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-201ENST00000325844 NISCHQ9Y2I1 1504 aa19.72■□□□□ 0.75
MRPS11-201ENST00000325844 SHROOM4Q9ULL8 1493 aa17.31■□□□□ 0.36
MRPS11-201ENST00000325844 DCAF8L2P0C7V8 631 aa17.24■□□□□ 0.35
MRPS11-201ENST00000325844 SUPT5HO00267 1087 aaKnown RBP16.96■□□□□ 0.31
MRPS11-201ENST00000325844 ZCCHC6Q5VYS8 1495 aaKnown RBP16.57■□□□□ 0.24
MRPS11-201ENST00000325844 CCDC180Q9P1Z9 1646 aa16.55■□□□□ 0.24
MRPS11-201ENST00000325844 CHIC1Q5VXU3 224 aa16.11■□□□□ 0.17
MRPS11-201ENST00000325844 ABCC9O60706 1549 aa16.09■□□□□ 0.17
MRPS11-201ENST00000325844 HRCP23327 699 aa15.93■□□□□ 0.14
MRPS11-201ENST00000325844 SCRIBQ14160 1630 aa15.92■□□□□ 0.14
MRPS11-201ENST00000325844 DCAF1Q9Y4B6 1507 aa15.91■□□□□ 0.14
MRPS11-201ENST00000325844 PCGF6Q9BYE7 350 aa15.9■□□□□ 0.14
MRPS11-201ENST00000325844 MYO15BQ96JP2 1530 aa15.87■□□□□ 0.13
MRPS11-201ENST00000325844 EHMT2Q96KQ7 1210 aa15.85■□□□□ 0.13
MRPS11-201ENST00000325844 LOC105371045A0A1W2PR82 267 aa15.84■□□□□ 0.13
MRPS11-201ENST00000325844 PPARGC1BQ86YN6 1023 aaKnown RBP15.84■□□□□ 0.13
MRPS11-201ENST00000325844 FAM9AQ8IZU1 332 aaPredicted RBP15.77■□□□□ 0.12
MRPS11-201ENST00000325844 TRIM41Q8WV44 630 aa15.66■□□□□ 0.1
MRPS11-201ENST00000325844 RSF1Q96T23 1441 aaPredicted RBP15.65■□□□□ 0.1
MRPS11-201ENST00000325844 PELP1Q8IZL8 1130 aaKnown RBP15.62■□□□□ 0.09
MRPS11-201ENST00000325844 CECR2Q9BXF3 1484 aa15.58■□□□□ 0.08
MRPS11-201ENST00000325844 PABPN1Q86U42 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
MRPS11-201ENST00000325844 NACADO15069 1562 aa15.51■□□□□ 0.07
MRPS11-201ENST00000325844 RB1CC1Q8TDY2 1594 aa15.44■□□□□ 0.06
MRPS11-201ENST00000325844 MROH2BQ7Z745 1585 aa15.42■□□□□ 0.06
MRPS11-201ENST00000325844 WIZO95785 1651 aa15.3■□□□□ 0.04
MRPS11-201ENST00000325844 TTBK1Q5TCY1 1321 aaPredicted RBP15.25■□□□□ 0.03
MRPS11-201ENST00000325844 TRIM26Q12899 539 aaPredicted RBP15.19■□□□□ 0.02
MRPS11-201ENST00000325844 SCAF1Q9H7N4 1312 aaKnown RBP15.18■□□□□ 0.02
MRPS11-201ENST00000325844 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
MRPS11-201ENST00000325844 RANGAP1P46060 587 aaPredicted RBP15.06■□□□□ 0
MRPS11-201ENST00000325844 UBTFP17480 764 aaKnown RBP15.05■□□□□ -0
MRPS11-201ENST00000325844 CCDC88BA6NC98 1476 aa15.04■□□□□ -0
MRPS11-201ENST00000325844 MYT1Q01538 1121 aa15.04■□□□□ -0
MRPS11-201ENST00000325844 ABCC8Q09428 1581 aa15.03■□□□□ -0
MRPS11-201ENST00000325844 ZEB1P37275 1124 aaPredicted RBP15.03■□□□□ -0
MRPS11-201ENST00000325844 SMARCA4P51532 1647 aa15.01□□□□□ -0.01
MRPS11-201ENST00000325844 UNC13AQ9UPW8 1703 aa14.97□□□□□ -0.01
MRPS11-201ENST00000325844 TOP2AP11388 1531 aaKnown RBP14.94□□□□□ -0.02
MRPS11-201ENST00000325844 SOGA1O94964 1423 aa14.91□□□□□ -0.02
MRPS11-201ENST00000325844 BICRAQ9NZM4 1560 aa14.89□□□□□ -0.03
MRPS11-201ENST00000325844 CSRNP3Q8WYN3 585 aa14.89□□□□□ -0.03
MRPS11-201ENST00000325844 SMARCA2P51531 1590 aa14.88□□□□□ -0.03
MRPS11-201ENST00000325844 GTF3C3Q9Y5Q9 886 aa14.87□□□□□ -0.03
MRPS11-201ENST00000325844 CENPBP07199 599 aaPredicted RBP14.86□□□□□ -0.03
MRPS11-201ENST00000325844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.85□□□□□ -0.03
MRPS11-201ENST00000325844 RUSC2Q8N2Y8 1516 aa14.84□□□□□ -0.03
MRPS11-201ENST00000325844 ACIN1Q9UKV3 1341 aaKnown RBP14.81□□□□□ -0.04
MRPS11-201ENST00000325844 NEUROD1Q13562 356 aa14.81□□□□□ -0.04
MRPS11-201ENST00000325844 BAZ1BQ9UIG0 1483 aaKnown RBP14.8□□□□□ -0.04
MRPS11-201ENST00000325844 CCER1Q8TC90 406 aaPredicted RBP14.79□□□□□ -0.04
MRPS11-201ENST00000325844 WRNQ14191 1432 aaPredicted RBP eCLIP14.78□□□□□ -0.04
MRPS11-201ENST00000325844 ATAD2BQ9ULI0 1458 aa14.77□□□□□ -0.04
MRPS11-201ENST00000325844 YTHDC1Q96MU7 727 aaKnown RBP14.76□□□□□ -0.05
MRPS11-201ENST00000325844 CEP162Q5TB80 1403 aa14.72□□□□□ -0.05
MRPS11-201ENST00000325844 EIF4G1Q04637 1599 aaKnown RBP14.72□□□□□ -0.05
MRPS11-201ENST00000325844 APLP2Q06481 763 aa14.67□□□□□ -0.06
MRPS11-201ENST00000325844 HNRNPUL2Q1KMD3 747 aaKnown RBP14.66□□□□□ -0.06
MRPS11-201ENST00000325844 DIEXFQ68CQ4 756 aaKnown RBP14.64□□□□□ -0.07
MRPS11-201ENST00000325844 TNIKQ9UKE5 1360 aa14.62□□□□□ -0.07
MRPS11-201ENST00000325844 SYNJ1O43426 1573 aa14.58□□□□□ -0.08
MRPS11-201ENST00000325844 GOLGA3Q08378 1498 aa14.58□□□□□ -0.08
MRPS11-201ENST00000325844 EEA1Q15075 1411 aa14.56□□□□□ -0.08
MRPS11-201ENST00000325844 AEBP2Q6ZN18 517 aaPredicted RBP14.53□□□□□ -0.08
MRPS11-201ENST00000325844 PEG3Q9GZU2 1588 aa14.53□□□□□ -0.08
MRPS11-201ENST00000325844 CLIP1P30622 1438 aa14.52□□□□□ -0.08
MRPS11-201ENST00000325844 RAPGEF2Q9Y4G8 1499 aa14.5□□□□□ -0.09
MRPS11-201ENST00000325844 CEP164Q9UPV0 1460 aa14.49□□□□□ -0.09
MRPS11-201ENST00000325844 ATP1B4Q9UN42 357 aaPredicted RBP14.48□□□□□ -0.09
MRPS11-201ENST00000325844 ITGAEP38570 1179 aa14.45□□□□□ -0.1
MRPS11-201ENST00000325844 NCAPD3P42695 1498 aa14.44□□□□□ -0.1
MRPS11-201ENST00000325844 P3H3Q8IVL6 736 aa14.42□□□□□ -0.1
MRPS11-201ENST00000325844 KIF27Q86VH2 1401 aa14.34□□□□□ -0.11
MRPS11-201ENST00000325844 KANK4Q5T7N3 995 aaPredicted RBP14.34□□□□□ -0.11
MRPS11-201ENST00000325844 CUX1P39880 1505 aa14.32□□□□□ -0.12
MRPS11-201ENST00000325844 VPS8Q8N3P4 1428 aa14.32□□□□□ -0.12
MRPS11-201ENST00000325844 TOP2BQ02880 1626 aa14.31□□□□□ -0.12
MRPS11-201ENST00000325844 DNAJC5BQ9UF47 199 aa14.31□□□□□ -0.12
MRPS11-201ENST00000325844 CUX2O14529 1486 aa14.3□□□□□ -0.12
MRPS11-201ENST00000325844 CADPSQ9ULU8 1353 aa14.3□□□□□ -0.12
MRPS11-201ENST00000325844 CFTRP13569 1480 aa14.3□□□□□ -0.12
MRPS11-201ENST00000325844 HMGXB3Q12766 1538 aa14.29□□□□□ -0.12
MRPS11-201ENST00000325844 KIF21BO75037 1637 aa14.27□□□□□ -0.12
MRPS11-201ENST00000325844 ZNF316A6NFI3 1004 aaPredicted RBP14.23□□□□□ -0.13
MRPS11-201ENST00000325844 CC2D2AQ9P2K1 1620 aa14.23□□□□□ -0.13
MRPS11-201ENST00000325844 NESP48681 1621 aa14.22□□□□□ -0.13
MRPS11-201ENST00000325844 PRXQ9BXM0 1461 aa14.21□□□□□ -0.13
MRPS11-201ENST00000325844 CARMIL1Q5VZK9 1371 aa14.2□□□□□ -0.14
MRPS11-201ENST00000325844 IGF1RP08069 1367 aa14.2□□□□□ -0.14
MRPS11-201ENST00000325844 FAM50AQ14320 339 aaKnown RBP14.19□□□□□ -0.14
MRPS11-201ENST00000325844 MIER1Q8N108 512 aa14.19□□□□□ -0.14
MRPS11-201ENST00000325844 FGD5Q6ZNL6 1462 aa14.18□□□□□ -0.14
MRPS11-201ENST00000325844 ARAP1Q96P48 1450 aa14.18□□□□□ -0.14
MRPS11-201ENST00000325844 RAD54L2Q9Y4B4 1467 aa14.16□□□□□ -0.14
MRPS11-201ENST00000325844 BIVM-ERCC5R4GMW8 1640 aa14.16□□□□□ -0.14
MRPS11-201ENST00000325844 FANCD2Q9BXW9 1451 aa14.16□□□□□ -0.14
MRPS11-201ENST00000325844 BCL11AQ9H165 835 aa14.15□□□□□ -0.14
MRPS11-201ENST00000325844 ARID3CA6NKF2 412 aa14.13□□□□□ -0.15
MRPS11-201ENST00000325844 TDRD9Q8NDG6 1382 aaKnown RBP14.12□□□□□ -0.15
MRPS11-201ENST00000325844 ARHGAP35Q9NRY4 1499 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms