RNA–Protein interactions for RNA: ENST00000323699.8

DEGS1-201, Transcript of delta 4-desaturase, sphingolipid 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEGS1, Length 2,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEGS1-201ENST00000323699 NISCHQ9Y2I1 1504 aa31.96■■■□□ 2.71
DEGS1-201ENST00000323699 CCDC180Q9P1Z9 1646 aa27.19■■□□□ 1.94
DEGS1-201ENST00000323699 SHROOM4Q9ULL8 1493 aa27.16■■□□□ 1.94
DEGS1-201ENST00000323699 ZCCHC6Q5VYS8 1495 aaKnown RBP27.09■■□□□ 1.93
DEGS1-201ENST00000323699 SUPT5HO00267 1087 aaKnown RBP26.72■■□□□ 1.87
DEGS1-201ENST00000323699 DCAF1Q9Y4B6 1507 aa26.33■■□□□ 1.8
DEGS1-201ENST00000323699 DCAF8L2P0C7V8 631 aa26.19■■□□□ 1.78
DEGS1-201ENST00000323699 CHIC1Q5VXU3 224 aa26.18■■□□□ 1.78
DEGS1-201ENST00000323699 MYO15BQ96JP2 1530 aa26.13■■□□□ 1.77
DEGS1-201ENST00000323699 HRCP23327 699 aa25.69■■□□□ 1.7
DEGS1-201ENST00000323699 ABCC9O60706 1549 aa25.6■■□□□ 1.69
DEGS1-201ENST00000323699 PCGF6Q9BYE7 350 aa25.46■■□□□ 1.67
DEGS1-201ENST00000323699 SCRIBQ14160 1630 aa25.36■■□□□ 1.65
DEGS1-201ENST00000323699 LOC105371045A0A1W2PR82 267 aa25.33■■□□□ 1.65
DEGS1-201ENST00000323699 RSF1Q96T23 1441 aaPredicted RBP25.33■■□□□ 1.65
DEGS1-201ENST00000323699 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.61
DEGS1-201ENST00000323699 NACADO15069 1562 aa25.05■■□□□ 1.6
DEGS1-201ENST00000323699 TRIM26Q12899 539 aaPredicted RBP25.05■■□□□ 1.6
DEGS1-201ENST00000323699 PPARGC1BQ86YN6 1023 aaKnown RBP25■■□□□ 1.59
DEGS1-201ENST00000323699 TRIM41Q8WV44 630 aa24.95■■□□□ 1.58
DEGS1-201ENST00000323699 CECR2Q9BXF3 1484 aa24.85■■□□□ 1.57
DEGS1-201ENST00000323699 MROH2BQ7Z745 1585 aa24.82■■□□□ 1.56
DEGS1-201ENST00000323699 WIZO95785 1651 aa24.7■■□□□ 1.55
DEGS1-201ENST00000323699 FAM9AQ8IZU1 332 aaPredicted RBP24.65■■□□□ 1.54
DEGS1-201ENST00000323699 BAZ1AQ9NRL2 1556 aaPredicted RBP24.63■■□□□ 1.53
DEGS1-201ENST00000323699 ZEB1P37275 1124 aaPredicted RBP24.62■■□□□ 1.53
DEGS1-201ENST00000323699 EIF4G1Q04637 1599 aaKnown RBP24.53■■□□□ 1.52
DEGS1-201ENST00000323699 TOP2AP11388 1531 aaKnown RBP24.36■■□□□ 1.49
DEGS1-201ENST00000323699 EHMT2Q96KQ7 1210 aa24.34■■□□□ 1.49
DEGS1-201ENST00000323699 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
DEGS1-201ENST00000323699 UNC13AQ9UPW8 1703 aa24.26■■□□□ 1.47
DEGS1-201ENST00000323699 SMARCA2P51531 1590 aa24.22■■□□□ 1.47
DEGS1-201ENST00000323699 CCDC88BA6NC98 1476 aa24.22■■□□□ 1.47
DEGS1-201ENST00000323699 ABCC8Q09428 1581 aa24.17■■□□□ 1.46
DEGS1-201ENST00000323699 WRNQ14191 1432 aaPredicted RBP eCLIP24.08■■□□□ 1.45
DEGS1-201ENST00000323699 EEA1Q15075 1411 aa24■■□□□ 1.43
DEGS1-201ENST00000323699 SOGA1O94964 1423 aa23.97■■□□□ 1.43
DEGS1-201ENST00000323699 CEP162Q5TB80 1403 aa23.97■■□□□ 1.43
DEGS1-201ENST00000323699 TNIKQ9UKE5 1360 aa23.97■■□□□ 1.43
DEGS1-201ENST00000323699 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.91■■□□□ 1.42
DEGS1-201ENST00000323699 PEG3Q9GZU2 1588 aa23.91■■□□□ 1.42
DEGS1-201ENST00000323699 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
DEGS1-201ENST00000323699 CCER1Q8TC90 406 aaPredicted RBP23.89■■□□□ 1.41
DEGS1-201ENST00000323699 CSRNP3Q8WYN3 585 aa23.87■■□□□ 1.41
DEGS1-201ENST00000323699 RUSC2Q8N2Y8 1516 aa23.84■■□□□ 1.41
DEGS1-201ENST00000323699 PABPN1Q86U42 306 aaKnown RBP eCLIP23.83■■□□□ 1.4
DEGS1-201ENST00000323699 GOLGA3Q08378 1498 aa23.79■■□□□ 1.4
DEGS1-201ENST00000323699 SCAF1Q9H7N4 1312 aaKnown RBP23.72■■□□□ 1.39
DEGS1-201ENST00000323699 UBTFP17480 764 aaKnown RBP23.71■■□□□ 1.39
DEGS1-201ENST00000323699 KIF21BO75037 1637 aa23.67■■□□□ 1.38
DEGS1-201ENST00000323699 SYNJ1O43426 1573 aa23.67■■□□□ 1.38
DEGS1-201ENST00000323699 CEP164Q9UPV0 1460 aa23.65■■□□□ 1.38
DEGS1-201ENST00000323699 TTBK1Q5TCY1 1321 aaPredicted RBP23.63■■□□□ 1.37
DEGS1-201ENST00000323699 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
DEGS1-201ENST00000323699 BAZ1BQ9UIG0 1483 aaKnown RBP23.55■■□□□ 1.36
DEGS1-201ENST00000323699 DIEXFQ68CQ4 756 aaKnown RBP23.54■■□□□ 1.36
DEGS1-201ENST00000323699 PELP1Q8IZL8 1130 aaKnown RBP23.54■■□□□ 1.36
DEGS1-201ENST00000323699 ACIN1Q9UKV3 1341 aaKnown RBP23.49■■□□□ 1.35
DEGS1-201ENST00000323699 CLIP1P30622 1438 aa23.49■■□□□ 1.35
DEGS1-201ENST00000323699 VPS8Q8N3P4 1428 aa23.44■■□□□ 1.34
DEGS1-201ENST00000323699 TOP2BQ02880 1626 aa23.42■■□□□ 1.34
DEGS1-201ENST00000323699 NEUROD1Q13562 356 aa23.4■■□□□ 1.34
DEGS1-201ENST00000323699 RAPGEF2Q9Y4G8 1499 aa23.4■■□□□ 1.34
DEGS1-201ENST00000323699 DNAJC5BQ9UF47 199 aa23.38■■□□□ 1.33
DEGS1-201ENST00000323699 ZNF316A6NFI3 1004 aaPredicted RBP23.36■■□□□ 1.33
DEGS1-201ENST00000323699 BIVM-ERCC5R4GMW8 1640 aa23.36■■□□□ 1.33
DEGS1-201ENST00000323699 CENPBP07199 599 aaPredicted RBP23.33■■□□□ 1.32
DEGS1-201ENST00000323699 HNRNPUL2Q1KMD3 747 aaKnown RBP23.26■■□□□ 1.31
DEGS1-201ENST00000323699 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
DEGS1-201ENST00000323699 APLP2Q06481 763 aa23.25■■□□□ 1.31
DEGS1-201ENST00000323699 PRXQ9BXM0 1461 aa23.21■■□□□ 1.31
DEGS1-201ENST00000323699 HMGXB3Q12766 1538 aa23.2■■□□□ 1.3
DEGS1-201ENST00000323699 GTF3C3Q9Y5Q9 886 aa23.17■■□□□ 1.3
DEGS1-201ENST00000323699 NCAPD3P42695 1498 aa23.16■■□□□ 1.3
DEGS1-201ENST00000323699 ARAP1Q96P48 1450 aa23.12■■□□□ 1.29
DEGS1-201ENST00000323699 CUX1P39880 1505 aa23.1■■□□□ 1.29
DEGS1-201ENST00000323699 RANGAP1P46060 587 aaPredicted RBP23.07■■□□□ 1.28
DEGS1-201ENST00000323699 CLSPNQ9HAW4 1339 aa23.05■■□□□ 1.28
DEGS1-201ENST00000323699 KIF27Q86VH2 1401 aa23.03■■□□□ 1.28
DEGS1-201ENST00000323699 CFTRP13569 1480 aa23.02■■□□□ 1.28
DEGS1-201ENST00000323699 MIER1Q8N108 512 aa23■■□□□ 1.27
DEGS1-201ENST00000323699 CC2D2AQ9P2K1 1620 aa22.99■■□□□ 1.27
DEGS1-201ENST00000323699 DHX57Q6P158 1386 aaKnown RBP22.96■■□□□ 1.27
DEGS1-201ENST00000323699 RRBP1Q9P2E9 1410 aaKnown RBP22.96■■□□□ 1.27
DEGS1-201ENST00000323699 KANK4Q5T7N3 995 aaPredicted RBP22.94■■□□□ 1.26
DEGS1-201ENST00000323699 PRDM2Q13029 1718 aa22.94■■□□□ 1.26
DEGS1-201ENST00000323699 ARHGAP35Q9NRY4 1499 aa22.89■■□□□ 1.26
DEGS1-201ENST00000323699 CUX2O14529 1486 aa22.88■■□□□ 1.25
DEGS1-201ENST00000323699 YTHDC1Q96MU7 727 aaKnown RBP22.88■■□□□ 1.25
DEGS1-201ENST00000323699 CCNB3Q8WWL7 1395 aa22.79■■□□□ 1.24
DEGS1-201ENST00000323699 IGF1RP08069 1367 aa22.76■■□□□ 1.23
DEGS1-201ENST00000323699 MAP3K1Q13233 1512 aa22.76■■□□□ 1.23
DEGS1-201ENST00000323699 TIAM1Q13009 1591 aa22.7■■□□□ 1.22
DEGS1-201ENST00000323699 CADPSQ9ULU8 1353 aa22.69■■□□□ 1.22
DEGS1-201ENST00000323699 CARMIL1Q5VZK9 1371 aa22.65■■□□□ 1.22
DEGS1-201ENST00000323699 FGD5Q6ZNL6 1462 aa22.64■■□□□ 1.22
DEGS1-201ENST00000323699 LRRC9Q6ZRR7 1453 aa22.6■■□□□ 1.21
DEGS1-201ENST00000323699 RAB3GAP2Q9H2M9 1393 aa22.59■■□□□ 1.21
DEGS1-201ENST00000323699 MAPKBP1O60336 1514 aa22.57■■□□□ 1.2
DEGS1-201ENST00000323699 CFAP43Q8NDM7 1665 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms