RNA–Protein interactions for RNA: ENST00000319441.5

PCK1-201, Transcript of phosphoenolpyruvate carboxykinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCK1, Length 4,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1-201ENST00000319441 NISCHQ9Y2I1 1504 aa19.56■□□□□ 0.72
PCK1-201ENST00000319441 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
PCK1-201ENST00000319441 SHROOM4Q9ULL8 1493 aa18.18■□□□□ 0.5
PCK1-201ENST00000319441 SUPT5HO00267 1087 aaKnown RBP18.17■□□□□ 0.5
PCK1-201ENST00000319441 EHMT2Q96KQ7 1210 aa17.29■□□□□ 0.36
PCK1-201ENST00000319441 FAM9AQ8IZU1 332 aaPredicted RBP17.03■□□□□ 0.32
PCK1-201ENST00000319441 PCGF6Q9BYE7 350 aa16.98■□□□□ 0.31
PCK1-201ENST00000319441 TRIM41Q8WV44 630 aa16.75■□□□□ 0.27
PCK1-201ENST00000319441 CHIC1Q5VXU3 224 aa16.74■□□□□ 0.27
PCK1-201ENST00000319441 TTBK1Q5TCY1 1321 aaPredicted RBP16.67■□□□□ 0.26
PCK1-201ENST00000319441 LOC105371045A0A1W2PR82 267 aa16.64■□□□□ 0.25
PCK1-201ENST00000319441 PPARGC1BQ86YN6 1023 aaKnown RBP16.47■□□□□ 0.23
PCK1-201ENST00000319441 RANGAP1P46060 587 aaPredicted RBP16.43■□□□□ 0.22
PCK1-201ENST00000319441 HRCP23327 699 aa16.34■□□□□ 0.21
PCK1-201ENST00000319441 APLP2Q06481 763 aa16.34■□□□□ 0.21
PCK1-201ENST00000319441 ABCC9O60706 1549 aa16.33■□□□□ 0.2
PCK1-201ENST00000319441 ZCCHC6Q5VYS8 1495 aaKnown RBP16.32■□□□□ 0.2
PCK1-201ENST00000319441 UBTFP17480 764 aaKnown RBP16.31■□□□□ 0.2
PCK1-201ENST00000319441 TRIM26Q12899 539 aaPredicted RBP16.28■□□□□ 0.2
PCK1-201ENST00000319441 CCER1Q8TC90 406 aaPredicted RBP16.25■□□□□ 0.19
PCK1-201ENST00000319441 ZEB1P37275 1124 aaPredicted RBP16.18■□□□□ 0.18
PCK1-201ENST00000319441 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
PCK1-201ENST00000319441 CCDC180Q9P1Z9 1646 aa16.04■□□□□ 0.16
PCK1-201ENST00000319441 ATP1B4Q9UN42 357 aaPredicted RBP15.97■□□□□ 0.15
PCK1-201ENST00000319441 SCRIBQ14160 1630 aa15.95■□□□□ 0.14
PCK1-201ENST00000319441 MYO15BQ96JP2 1530 aa15.92■□□□□ 0.14
PCK1-201ENST00000319441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.92■□□□□ 0.14
PCK1-201ENST00000319441 HNRNPUL2Q1KMD3 747 aaKnown RBP15.86■□□□□ 0.13
PCK1-201ENST00000319441 YTHDC1Q96MU7 727 aaKnown RBP15.81■□□□□ 0.12
PCK1-201ENST00000319441 CENPBP07199 599 aaPredicted RBP15.79■□□□□ 0.12
PCK1-201ENST00000319441 ITGAEP38570 1179 aa15.77■□□□□ 0.11
PCK1-201ENST00000319441 RSF1Q96T23 1441 aaPredicted RBP15.7■□□□□ 0.1
PCK1-201ENST00000319441 CSRNP3Q8WYN3 585 aa15.62■□□□□ 0.09
PCK1-201ENST00000319441 DCAF1Q9Y4B6 1507 aa15.62■□□□□ 0.09
PCK1-201ENST00000319441 DIEXFQ68CQ4 756 aaKnown RBP15.55■□□□□ 0.08
PCK1-201ENST00000319441 PELP1Q8IZL8 1130 aaKnown RBP15.54■□□□□ 0.08
PCK1-201ENST00000319441 CECR2Q9BXF3 1484 aa15.49■□□□□ 0.07
PCK1-201ENST00000319441 FAM50AQ14320 339 aaKnown RBP15.37■□□□□ 0.05
PCK1-201ENST00000319441 NACADO15069 1562 aa15.36■□□□□ 0.05
PCK1-201ENST00000319441 P3H3Q8IVL6 736 aa15.35■□□□□ 0.05
PCK1-201ENST00000319441 RB1CC1Q8TDY2 1594 aa15.34■□□□□ 0.05
PCK1-201ENST00000319441 MROH2BQ7Z745 1585 aa15.28■□□□□ 0.04
PCK1-201ENST00000319441 ZNF316A6NFI3 1004 aaPredicted RBP15.28■□□□□ 0.04
PCK1-201ENST00000319441 NEUROD1Q13562 356 aa15.28■□□□□ 0.04
PCK1-201ENST00000319441 GTF3C3Q9Y5Q9 886 aa15.24■□□□□ 0.03
PCK1-201ENST00000319441 CNGB1Q14028 1251 aaPredicted RBP15.21■□□□□ 0.03
PCK1-201ENST00000319441 NEFLP07196 543 aa15.2■□□□□ 0.02
PCK1-201ENST00000319441 CEP162Q5TB80 1403 aa15.19■□□□□ 0.02
PCK1-201ENST00000319441 POLR3GLQ9BT43 218 aa15.18■□□□□ 0.02
PCK1-201ENST00000319441 BAZ1AQ9NRL2 1556 aaPredicted RBP15.17■□□□□ 0.02
PCK1-201ENST00000319441 ARID3CA6NKF2 412 aa15.16■□□□□ 0.02
PCK1-201ENST00000319441 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
PCK1-201ENST00000319441 SOGA1O94964 1423 aa15.14■□□□□ 0.01
PCK1-201ENST00000319441 ACIN1Q9UKV3 1341 aaKnown RBP15.14■□□□□ 0.01
PCK1-201ENST00000319441 CLIP1P30622 1438 aa15.13■□□□□ 0.01
PCK1-201ENST00000319441 TRIM52Q96A61 297 aa15.11■□□□□ 0.01
PCK1-201ENST00000319441 ABCC8Q09428 1581 aa15.08■□□□□ 0.01
PCK1-201ENST00000319441 WIZO95785 1651 aa15.08■□□□□ 0.01
PCK1-201ENST00000319441 CCDC88BA6NC98 1476 aa15.07■□□□□ 0
PCK1-201ENST00000319441 TNIKQ9UKE5 1360 aa15.06■□□□□ 0
PCK1-201ENST00000319441 GOLGA3Q08378 1498 aa15.06■□□□□ 0
PCK1-201ENST00000319441 BAZ1BQ9UIG0 1483 aaKnown RBP15.05■□□□□ -0
PCK1-201ENST00000319441 EEA1Q15075 1411 aa15.04■□□□□ -0
PCK1-201ENST00000319441 FBLN2P98095 1184 aa15.03■□□□□ -0
PCK1-201ENST00000319441 SCAF1Q9H7N4 1312 aaKnown RBP15□□□□□ -0.01
PCK1-201ENST00000319441 BCANQ96GW7 911 aa14.98□□□□□ -0.01
PCK1-201ENST00000319441 MIER1Q8N108 512 aa14.96□□□□□ -0.01
PCK1-201ENST00000319441 ERICH6Q7L0X2 663 aa14.96□□□□□ -0.01
PCK1-201ENST00000319441 MYT1LQ9UL68 1186 aa14.94□□□□□ -0.02
PCK1-201ENST00000319441 CEP164Q9UPV0 1460 aa14.93□□□□□ -0.02
PCK1-201ENST00000319441 ZNF326Q5BKZ1 582 aaKnown RBP14.92□□□□□ -0.02
PCK1-201ENST00000319441 ANP32CO43423 234 aa14.89□□□□□ -0.03
PCK1-201ENST00000319441 DDX10Q13206 875 aaKnown RBP14.88□□□□□ -0.03
PCK1-201ENST00000319441 HIRIP3Q9BW71 556 aaPredicted RBP14.88□□□□□ -0.03
PCK1-201ENST00000319441 CHIC2Q9UKJ5 165 aa14.87□□□□□ -0.03
PCK1-201ENST00000319441 RUSC2Q8N2Y8 1516 aa14.86□□□□□ -0.03
PCK1-201ENST00000319441 ZNF777Q9ULD5 760 aaPredicted RBP14.85□□□□□ -0.03
PCK1-201ENST00000319441 TOP2AP11388 1531 aaKnown RBP14.84□□□□□ -0.03
PCK1-201ENST00000319441 KIF27Q86VH2 1401 aa14.84□□□□□ -0.03
PCK1-201ENST00000319441 KANK4Q5T7N3 995 aaPredicted RBP14.8□□□□□ -0.04
PCK1-201ENST00000319441 TONSLQ96HA7 1378 aa14.78□□□□□ -0.04
PCK1-201ENST00000319441 MTUS2Q5JR59 1369 aa14.77□□□□□ -0.04
PCK1-201ENST00000319441 SMARCA4P51532 1647 aa14.77□□□□□ -0.05
PCK1-201ENST00000319441 VPS8Q8N3P4 1428 aa14.74□□□□□ -0.05
PCK1-201ENST00000319441 RRP7BPQ9NSQ0 103 aa14.72□□□□□ -0.05
PCK1-201ENST00000319441 SIN3AQ96ST3 1273 aa14.72□□□□□ -0.05
PCK1-201ENST00000319441 CUX2O14529 1486 aa14.71□□□□□ -0.05
PCK1-201ENST00000319441 ATAD2BQ9ULI0 1458 aa14.71□□□□□ -0.05
PCK1-201ENST00000319441 CDK11AQ9UQ88 783 aaPredicted RBP14.7□□□□□ -0.06
PCK1-201ENST00000319441 RAPGEF2Q9Y4G8 1499 aa14.69□□□□□ -0.06
PCK1-201ENST00000319441 CARMIL1Q5VZK9 1371 aa14.68□□□□□ -0.06
PCK1-201ENST00000319441 SMARCA2P51531 1590 aa14.67□□□□□ -0.06
PCK1-201ENST00000319441 FKBP8Q14318 412 aa14.66□□□□□ -0.06
PCK1-201ENST00000319441 CCNB3Q8WWL7 1395 aa14.65□□□□□ -0.06
PCK1-201ENST00000319441 HNRNPUQ00839 825 aaKnown RBP eCLIP14.62□□□□□ -0.07
PCK1-201ENST00000319441 SLC4A1APQ9BWU0 796 aaKnown RBP14.62□□□□□ -0.07
PCK1-201ENST00000319441 MYT1Q01538 1121 aa14.62□□□□□ -0.07
PCK1-201ENST00000319441 FAM9BQ8IZU0 186 aa14.59□□□□□ -0.07
PCK1-201ENST00000319441 CHMP7Q8WUX9 453 aaPredicted RBP14.59□□□□□ -0.07
PCK1-201ENST00000319441 CLSPNQ9HAW4 1339 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms