RNA–Protein interactions for RNA: ENST00000317560.13

PPHLN1-202, Transcript of periphilin 1, humanhuman

TSL 2 BASIC

Gene PPHLN1, Length 1,359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPHLN1-202ENST00000317560 TROVE2P10155 538 aaKnown RBP eCLIP7.93□□□□□ -1.146e-73■■■■■ 219.8
PPHLN1-202ENST00000317560 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.06□□□□□ -0.962e-6■■■■■ 155.3
PPHLN1-202ENST00000317560 SF3B1O75533 1304 aaKnown RBP eCLIP7.93□□□□□ -1.143e-8■■■■■ 155.1
PPHLN1-202ENST00000317560 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.6□□□□□ -1.192e-6■■■■■ 54.9
PPHLN1-202ENST00000317560 SUB1P53999 127 aaKnown RBP eCLIP6.19□□□□□ -1.422e-9■■■■■ 54.4
PPHLN1-202ENST00000317560 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.39□□□□□ -1.239e-8■■■■■ 46.1
PPHLN1-202ENST00000317560 EFTUD2Q15029 972 aaKnown RBP eCLIP7.98□□□□□ -1.134e-8■■■■■ 42.6
PPHLN1-202ENST00000317560 PCBP2Q15366 365 aaKnown RBP eCLIP7.59□□□□□ -1.22e-6■■■■■ 40
PPHLN1-202ENST00000317560 DDX6P26196 483 aaKnown RBP eCLIP7.48□□□□□ -1.211e-6■■■■■ 38.6
PPHLN1-202ENST00000317560 PTBP1P26599 531 aaKnown RBP eCLIP7.08□□□□□ -1.282e-7■■■■■ 36.5
PPHLN1-202ENST00000317560 CPSF6Q16630 551 aaKnown RBP eCLIP8.1□□□□□ -1.119e-10■■■■■ 34.4
PPHLN1-202ENST00000317560 ILF3Q12906 894 aaKnown RBP eCLIP7.14□□□□□ -1.273e-9■■■■■ 31.4
PPHLN1-202ENST00000317560 UPF1Q92900 1129 aaKnown RBP eCLIP12.16□□□□□ -0.469e-7■■■■■ 27.6
PPHLN1-202ENST00000317560 NCBP2P52298 156 aaKnown RBP eCLIP7.24□□□□□ -1.251e-6■■■■■ 27.4
PPHLN1-202ENST00000317560 QKIQ96PU8 341 aaKnown RBP eCLIP7.96□□□□□ -1.142e-6■■■■■ 27
PPHLN1-202ENST00000317560 AGGF1Q8N302 714 aaeCLIP8.47□□□□□ -1.051e-6■■■■□ 23.1
PPHLN1-202ENST00000317560 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.84□□□□□ -0.834e-7■■■■□ 22.4
PPHLN1-202ENST00000317560 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.02□□□□□ -1.134e-7■■■■□ 20.4
PPHLN1-202ENST00000317560 U2AF2P26368 475 aaKnown RBP eCLIP8.89□□□□□ -0.991e-6■■■□□ 19.1
PPHLN1-202ENST00000317560 PPIGQ13427 754 aaKnown RBP eCLIP7.39□□□□□ -1.238e-7■■■□□ 18.9
PPHLN1-202ENST00000317560 YBX3P16989 372 aaKnown RBP eCLIP7.99□□□□□ -1.138e-7■■■□□ 18.7
PPHLN1-202ENST00000317560 PABPC4Q13310 644 aaKnown RBP eCLIP8.45□□□□□ -1.066e-7■■■□□ 18.7
PPHLN1-202ENST00000317560 KHSRPQ92945 711 aaKnown RBP eCLIP12.19□□□□□ -0.469e-7■■■□□ 17.9
PPHLN1-202ENST00000317560 HNRNPLP14866 589 aaKnown RBP eCLIP7.69□□□□□ -1.186e-8■■■□□ 15
PPHLN1-202ENST00000317560 DDX3XO00571 662 aaKnown RBP eCLIP8.35□□□□□ -1.072e-6■■□□□ 14
PPHLN1-202ENST00000317560 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.02□□□□□ -0.977e-7■■□□□ 13.8
PPHLN1-202ENST00000317560 TIA1P31483 386 aaKnown RBP eCLIP7.39□□□□□ -1.233e-14■■□□□ 13
PPHLN1-202ENST00000317560 PCBP1Q15365 356 aaKnown RBP eCLIP8□□□□□ -1.136e-7■□□□□ 11.1
PPHLN1-202ENST00000317560 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.32□□□□□ -1.084e-8■□□□□ 10.1
PPHLN1-202ENST00000317560 FUBP3Q96I24 572 aaKnown RBP eCLIP7.77□□□□□ -1.176e-6■□□□□ 9.8
PPHLN1-202ENST00000317560 ZNF622Q969S3 477 aaKnown RBP eCLIP8.53□□□□□ -1.049e-7■□□□□ 9.4
PPHLN1-202ENST00000317560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.02□□□□□ -0.338e-7■□□□□ 8.8
PPHLN1-202ENST00000317560 SRSF1Q07955 248 aaKnown RBP eCLIP5.76□□□□□ -1.493e-8■□□□□ 8.4
Retrieved 33 of 33 RNA–protein pairs in 15.5 ms