RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 DCAF8L2P0C7V8 631 aa21.89■■□□□ 1.09
AFF3-201ENST00000317233 PELP1Q8IZL8 1130 aaKnown RBP21.84■■□□□ 1.09
AFF3-201ENST00000317233 ERICH6Q7L0X2 663 aa20.99■□□□□ 0.95
AFF3-201ENST00000317233 CCER1Q8TC90 406 aaPredicted RBP20.85■□□□□ 0.93
AFF3-201ENST00000317233 FAM9AQ8IZU1 332 aaPredicted RBP20.75■□□□□ 0.91
AFF3-201ENST00000317233 APLP2Q06481 763 aa20.58■□□□□ 0.89
AFF3-201ENST00000317233 EHMT2Q96KQ7 1210 aa20.42■□□□□ 0.86
AFF3-201ENST00000317233 SUPT5HO00267 1087 aaKnown RBP20.27■□□□□ 0.84
AFF3-201ENST00000317233 MYT1Q01538 1121 aa20.19■□□□□ 0.82
AFF3-201ENST00000317233 YTHDC1Q96MU7 727 aaKnown RBP20.07■□□□□ 0.8
AFF3-201ENST00000317233 DAXXQ9UER7 740 aaPredicted RBP20.05■□□□□ 0.8
AFF3-201ENST00000317233 NEFLP07196 543 aa20.03■□□□□ 0.8
AFF3-201ENST00000317233 CENPBP07199 599 aaPredicted RBP20.03■□□□□ 0.8
AFF3-201ENST00000317233 TTBK1Q5TCY1 1321 aaPredicted RBP19.79■□□□□ 0.76
AFF3-201ENST00000317233 ATP1B4Q9UN42 357 aaPredicted RBP19.76■□□□□ 0.75
AFF3-201ENST00000317233 PCGF6Q9BYE7 350 aa19.64■□□□□ 0.73
AFF3-201ENST00000317233 RANGAP1P46060 587 aaPredicted RBP19.53■□□□□ 0.72
AFF3-201ENST00000317233 MYT1LQ9UL68 1186 aa19.46■□□□□ 0.71
AFF3-201ENST00000317233 SHROOM4Q9ULL8 1493 aa19.45■□□□□ 0.7
AFF3-201ENST00000317233 ZNF316A6NFI3 1004 aaPredicted RBP19.4■□□□□ 0.7
AFF3-201ENST00000317233 ZEB1P37275 1124 aaPredicted RBP19.37■□□□□ 0.69
AFF3-201ENST00000317233 CLSPNQ9HAW4 1339 aa19.29■□□□□ 0.68
AFF3-201ENST00000317233 SLC4A1APQ9BWU0 796 aaKnown RBP19.27■□□□□ 0.68
AFF3-201ENST00000317233 POLR3GLQ9BT43 218 aa19.26■□□□□ 0.67
AFF3-201ENST00000317233 RTL5Q5HYW3 569 aaPredicted RBP19.24■□□□□ 0.67
AFF3-201ENST00000317233 CHIC1Q5VXU3 224 aa19.16■□□□□ 0.66
AFF3-201ENST00000317233 UBTFP17480 764 aaKnown RBP19.03■□□□□ 0.64
AFF3-201ENST00000317233 ZBTB47Q9UFB7 747 aaPredicted RBP19.02■□□□□ 0.64
AFF3-201ENST00000317233 CNGB1Q14028 1251 aaPredicted RBP18.97■□□□□ 0.63
AFF3-201ENST00000317233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.92■□□□□ 0.62
AFF3-201ENST00000317233 HNRNPUL2Q1KMD3 747 aaKnown RBP18.92■□□□□ 0.62
AFF3-201ENST00000317233 SLC24A1O60721 1099 aa18.87■□□□□ 0.61
AFF3-201ENST00000317233 TRIM41Q8WV44 630 aa18.76■□□□□ 0.59
AFF3-201ENST00000317233 BCL11AQ9H165 835 aa18.68■□□□□ 0.58
AFF3-201ENST00000317233 ITGAEP38570 1179 aa18.65■□□□□ 0.58
AFF3-201ENST00000317233 ANP32BQ92688 251 aaKnown RBP18.6■□□□□ 0.57
AFF3-201ENST00000317233 CDK11BP21127 795 aaKnown RBP18.56■□□□□ 0.56
AFF3-201ENST00000317233 CDK11AQ9UQ88 783 aaPredicted RBP18.56■□□□□ 0.56
AFF3-201ENST00000317233 NEFMP07197 916 aa18.53■□□□□ 0.56
AFF3-201ENST00000317233 CANXP27824 592 aaKnown RBP18.5■□□□□ 0.55
AFF3-201ENST00000317233 GLIPR1L2Q4G1C9 344 aa18.44■□□□□ 0.54
AFF3-201ENST00000317233 BCANQ96GW7 911 aa18.42■□□□□ 0.54
AFF3-201ENST00000317233 PPARGC1BQ86YN6 1023 aaKnown RBP18.41■□□□□ 0.54
AFF3-201ENST00000317233 EIF5BO60841 1220 aaKnown RBP18.37■□□□□ 0.53
AFF3-201ENST00000317233 HSP90AA1P07900 732 aaKnown RBP18.36■□□□□ 0.53
AFF3-201ENST00000317233 NISCHQ9Y2I1 1504 aa18.24■□□□□ 0.51
AFF3-201ENST00000317233 ANP32AP39687 249 aaKnown RBP18.19■□□□□ 0.5
AFF3-201ENST00000317233 TRIM52Q96A61 297 aa18.14■□□□□ 0.49
AFF3-201ENST00000317233 TRIM26Q12899 539 aaPredicted RBP18.13■□□□□ 0.49
AFF3-201ENST00000317233 UPF2Q9HAU5 1272 aaKnown RBP18.11■□□□□ 0.49
AFF3-201ENST00000317233 ZNF326Q5BKZ1 582 aaKnown RBP18.06■□□□□ 0.48
AFF3-201ENST00000317233 HRCP23327 699 aa18.06■□□□□ 0.48
AFF3-201ENST00000317233 ANP32CO43423 234 aa18.04■□□□□ 0.48
AFF3-201ENST00000317233 FAM50AQ14320 339 aaKnown RBP18.03■□□□□ 0.48
AFF3-201ENST00000317233 NPM2Q86SE8 214 aaKnown RBP18.01■□□□□ 0.47
AFF3-201ENST00000317233 ESF1Q9H501 851 aaKnown RBP17.98■□□□□ 0.47
AFF3-201ENST00000317233 DIEXFQ68CQ4 756 aaKnown RBP17.96■□□□□ 0.47
AFF3-201ENST00000317233 TULP1O00294 542 aaPredicted RBP17.94■□□□□ 0.46
AFF3-201ENST00000317233 NEUROD1Q13562 356 aa17.94■□□□□ 0.46
AFF3-201ENST00000317233 TNNT2P45379 298 aaPredicted RBP17.93■□□□□ 0.46
AFF3-201ENST00000317233 A0A0G2JS52 829 aa17.92■□□□□ 0.46
AFF3-201ENST00000317233 NCBP3Q53F19 620 aaKnown RBP17.88■□□□□ 0.45
AFF3-201ENST00000317233 ARXQ96QS3 562 aa17.83■□□□□ 0.45
AFF3-201ENST00000317233 SCAF1Q9H7N4 1312 aaKnown RBP17.83■□□□□ 0.44
AFF3-201ENST00000317233 STAG3Q9UJ98 1225 aa17.82■□□□□ 0.44
AFF3-201ENST00000317233 PLPPR3Q6T4P5 718 aa17.79■□□□□ 0.44
AFF3-201ENST00000317233 ZRSR1Q15695 479 aaKnown RBP17.79■□□□□ 0.44
AFF3-201ENST00000317233 TRIM44Q96DX7 344 aaPredicted RBP17.77■□□□□ 0.43
AFF3-201ENST00000317233 NCLP19338 710 aaKnown RBP17.73■□□□□ 0.43
AFF3-201ENST00000317233 MYH16Q9H6N6 1097 aa17.69■□□□□ 0.42
AFF3-201ENST00000317233 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.68■□□□□ 0.42
AFF3-201ENST00000317233 FBLN2P98095 1184 aa17.64■□□□□ 0.41
AFF3-201ENST00000317233 DNTTIP2Q5QJE6 756 aaKnown RBP17.61■□□□□ 0.41
AFF3-201ENST00000317233 GTF3C3Q9Y5Q9 886 aa17.6■□□□□ 0.41
AFF3-201ENST00000317233 PRM3Q9NNZ6 103 aa17.58■□□□□ 0.4
AFF3-201ENST00000317233 CHGAP10645 457 aaKnown RBP17.56■□□□□ 0.4
AFF3-201ENST00000317233 PTMAP06454 111 aaKnown RBP17.56■□□□□ 0.4
AFF3-201ENST00000317233 NBR1Q14596 966 aa17.56■□□□□ 0.4
AFF3-201ENST00000317233 CLSTN1O94985 981 aa17.55■□□□□ 0.4
AFF3-201ENST00000317233 GOLGA6L22H0YM25 854 aa17.54■□□□□ 0.4
AFF3-201ENST00000317233 NPHP1O15259 732 aa17.53■□□□□ 0.4
AFF3-201ENST00000317233 ANP32EQ9BTT0 268 aa17.51■□□□□ 0.39
AFF3-201ENST00000317233 GOLGA6L6A8MZA4 724 aa17.48■□□□□ 0.39
AFF3-201ENST00000317233 HAP1P54257 671 aaPredicted RBP17.45■□□□□ 0.38
AFF3-201ENST00000317233 ZBTB7CA1YPR0 619 aa17.44■□□□□ 0.38
AFF3-201ENST00000317233 BECN1Q14457 450 aa17.44■□□□□ 0.38
AFF3-201ENST00000317233 NRDCO43847 1150 aa17.42■□□□□ 0.38
AFF3-201ENST00000317233 C14orf37Q86TY3 774 aa17.42■□□□□ 0.38
AFF3-201ENST00000317233 L1TD1Q5T7N2 865 aaKnown RBP17.41■□□□□ 0.38
AFF3-201ENST00000317233 CASC1Q6TDU7 716 aa17.41■□□□□ 0.38
AFF3-201ENST00000317233 PLEKHG5O94827 1062 aa17.41■□□□□ 0.38
AFF3-201ENST00000317233 SALL2Q9Y467 1007 aaPredicted RBP17.4■□□□□ 0.38
AFF3-201ENST00000317233 WDR43Q15061 677 aaKnown RBP eCLIP17.4■□□□□ 0.38
AFF3-201ENST00000317233 TPRNQ4KMQ1 711 aa17.39■□□□□ 0.37
AFF3-201ENST00000317233 CCDC136Q96JN2 1154 aa17.38■□□□□ 0.37
AFF3-201ENST00000317233 KRI1Q8N9T8 703 aaKnown RBP17.37■□□□□ 0.37
AFF3-201ENST00000317233 ZNF777Q9ULD5 760 aaPredicted RBP17.37■□□□□ 0.37
AFF3-201ENST00000317233 TAOK2Q9UL54 1235 aa17.36■□□□□ 0.37
AFF3-201ENST00000317233 GOLGA2Q08379 1002 aa17.34■□□□□ 0.37
AFF3-201ENST00000317233 NOC3LQ8WTT2 800 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms