RNA–Protein interactions for RNA: ENST00000316999.9

SMAP1-201, Transcript of small ArfGAP 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAP1, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAP1-201ENST00000316999 NISCHQ9Y2I1 1504 aa35.7■■■■□ 3.31
SMAP1-201ENST00000316999 CCDC180Q9P1Z9 1646 aa30.65■■■□□ 2.5
SMAP1-201ENST00000316999 ZCCHC6Q5VYS8 1495 aaKnown RBP30.06■■■□□ 2.4
SMAP1-201ENST00000316999 SHROOM4Q9ULL8 1493 aa29.86■■■□□ 2.37
SMAP1-201ENST00000316999 DCAF8L2P0C7V8 631 aa29.66■■■□□ 2.34
SMAP1-201ENST00000316999 DCAF1Q9Y4B6 1507 aa29.34■■■□□ 2.29
SMAP1-201ENST00000316999 SUPT5HO00267 1087 aaKnown RBP29.01■■■□□ 2.23
SMAP1-201ENST00000316999 ABCC9O60706 1549 aa28.84■■■□□ 2.21
SMAP1-201ENST00000316999 MYO15BQ96JP2 1530 aa28.74■■■□□ 2.19
SMAP1-201ENST00000316999 SCRIBQ14160 1630 aa28.55■■■□□ 2.16
SMAP1-201ENST00000316999 NACADO15069 1562 aa28.48■■■□□ 2.15
SMAP1-201ENST00000316999 RB1CC1Q8TDY2 1594 aa28.13■■■□□ 2.09
SMAP1-201ENST00000316999 RSF1Q96T23 1441 aaPredicted RBP28■■■□□ 2.07
SMAP1-201ENST00000316999 CHIC1Q5VXU3 224 aa27.98■■■□□ 2.07
SMAP1-201ENST00000316999 CECR2Q9BXF3 1484 aa27.87■■■□□ 2.05
SMAP1-201ENST00000316999 UNC13AQ9UPW8 1703 aa27.72■■■□□ 2.03
SMAP1-201ENST00000316999 MROH2BQ7Z745 1585 aa27.71■■■□□ 2.03
SMAP1-201ENST00000316999 WIZO95785 1651 aa27.52■■■□□ 2
SMAP1-201ENST00000316999 PABPN1Q86U42 306 aaKnown RBP eCLIP27.46■■□□□ 1.99
SMAP1-201ENST00000316999 BAZ1AQ9NRL2 1556 aaPredicted RBP27.44■■□□□ 1.98
SMAP1-201ENST00000316999 BICRAQ9NZM4 1560 aa27.41■■□□□ 1.98
SMAP1-201ENST00000316999 SMARCA4P51532 1647 aa27.3■■□□□ 1.96
SMAP1-201ENST00000316999 LOC105371045A0A1W2PR82 267 aa27.1■■□□□ 1.93
SMAP1-201ENST00000316999 TRIM41Q8WV44 630 aa27.1■■□□□ 1.93
SMAP1-201ENST00000316999 TOP2AP11388 1531 aaKnown RBP27.08■■□□□ 1.93
SMAP1-201ENST00000316999 CCDC88BA6NC98 1476 aa26.97■■□□□ 1.91
SMAP1-201ENST00000316999 SMARCA2P51531 1590 aa26.93■■□□□ 1.9
SMAP1-201ENST00000316999 EIF4G1Q04637 1599 aaKnown RBP26.9■■□□□ 1.9
SMAP1-201ENST00000316999 PEG3Q9GZU2 1588 aa26.85■■□□□ 1.89
SMAP1-201ENST00000316999 FAM9AQ8IZU1 332 aaPredicted RBP26.81■■□□□ 1.88
SMAP1-201ENST00000316999 ATAD2BQ9ULI0 1458 aa26.76■■□□□ 1.87
SMAP1-201ENST00000316999 ABCC8Q09428 1581 aa26.66■■□□□ 1.86
SMAP1-201ENST00000316999 BAZ1BQ9UIG0 1483 aaKnown RBP26.61■■□□□ 1.85
SMAP1-201ENST00000316999 EHMT2Q96KQ7 1210 aa26.55■■□□□ 1.84
SMAP1-201ENST00000316999 PCGF6Q9BYE7 350 aa26.41■■□□□ 1.82
SMAP1-201ENST00000316999 NCAPD3P42695 1498 aa26.38■■□□□ 1.81
SMAP1-201ENST00000316999 SOGA1O94964 1423 aa26.3■■□□□ 1.8
SMAP1-201ENST00000316999 HMGXB3Q12766 1538 aa26.3■■□□□ 1.8
SMAP1-201ENST00000316999 WRNQ14191 1432 aaPredicted RBP eCLIP26.29■■□□□ 1.8
SMAP1-201ENST00000316999 RUSC2Q8N2Y8 1516 aa26.22■■□□□ 1.79
SMAP1-201ENST00000316999 SYNJ1O43426 1573 aa26.2■■□□□ 1.78
SMAP1-201ENST00000316999 CSRNP3Q8WYN3 585 aa26.1■■□□□ 1.77
SMAP1-201ENST00000316999 TRIM26Q12899 539 aaPredicted RBP26.09■■□□□ 1.77
SMAP1-201ENST00000316999 EEA1Q15075 1411 aa26.05■■□□□ 1.76
SMAP1-201ENST00000316999 CC2D2AQ9P2K1 1620 aa26.01■■□□□ 1.75
SMAP1-201ENST00000316999 HRCP23327 699 aa25.99■■□□□ 1.75
SMAP1-201ENST00000316999 CFTRP13569 1480 aa25.97■■□□□ 1.75
SMAP1-201ENST00000316999 TOP2BQ02880 1626 aa25.94■■□□□ 1.74
SMAP1-201ENST00000316999 TNIKQ9UKE5 1360 aa25.9■■□□□ 1.74
SMAP1-201ENST00000316999 UBTFP17480 764 aaKnown RBP25.88■■□□□ 1.73
SMAP1-201ENST00000316999 BIVM-ERCC5R4GMW8 1640 aa25.87■■□□□ 1.73
SMAP1-201ENST00000316999 PPARGC1BQ86YN6 1023 aaKnown RBP25.86■■□□□ 1.73
SMAP1-201ENST00000316999 CEP162Q5TB80 1403 aa25.85■■□□□ 1.73
SMAP1-201ENST00000316999 CUX1P39880 1505 aa25.83■■□□□ 1.73
SMAP1-201ENST00000316999 GOLGA3Q08378 1498 aa25.82■■□□□ 1.72
SMAP1-201ENST00000316999 CADPSQ9ULU8 1353 aa25.8■■□□□ 1.72
SMAP1-201ENST00000316999 CEP164Q9UPV0 1460 aa25.76■■□□□ 1.71
SMAP1-201ENST00000316999 KIF21BO75037 1637 aa25.74■■□□□ 1.71
SMAP1-201ENST00000316999 PRDM2Q13029 1718 aa25.72■■□□□ 1.71
SMAP1-201ENST00000316999 RAPGEF2Q9Y4G8 1499 aa25.68■■□□□ 1.7
SMAP1-201ENST00000316999 DNAJC5BQ9UF47 199 aa25.56■■□□□ 1.68
SMAP1-201ENST00000316999 NESP48681 1621 aa25.54■■□□□ 1.68
SMAP1-201ENST00000316999 KIF27Q86VH2 1401 aa25.53■■□□□ 1.68
SMAP1-201ENST00000316999 PRXQ9BXM0 1461 aa25.53■■□□□ 1.68
SMAP1-201ENST00000316999 FANCD2Q9BXW9 1451 aa25.52■■□□□ 1.68
SMAP1-201ENST00000316999 TTBK1Q5TCY1 1321 aaPredicted RBP25.51■■□□□ 1.67
SMAP1-201ENST00000316999 CLIP1P30622 1438 aa25.51■■□□□ 1.67
SMAP1-201ENST00000316999 RANGAP1P46060 587 aaPredicted RBP25.49■■□□□ 1.67
SMAP1-201ENST00000316999 FGD5Q6ZNL6 1462 aa25.45■■□□□ 1.66
SMAP1-201ENST00000316999 ERICH3Q5RHP9 1530 aa25.44■■□□□ 1.66
SMAP1-201ENST00000316999 CUX2O14529 1486 aa25.41■■□□□ 1.66
SMAP1-201ENST00000316999 IGF1RP08069 1367 aa25.37■■□□□ 1.65
SMAP1-201ENST00000316999 VPS8Q8N3P4 1428 aa25.32■■□□□ 1.64
SMAP1-201ENST00000316999 LAMC3Q9Y6N6 1575 aa25.32■■□□□ 1.64
SMAP1-201ENST00000316999 DNMBPQ6XZF7 1577 aa25.3■■□□□ 1.64
SMAP1-201ENST00000316999 TOPBP1Q92547 1522 aa25.3■■□□□ 1.64
SMAP1-201ENST00000316999 RAD54L2Q9Y4B4 1467 aa25.27■■□□□ 1.64
SMAP1-201ENST00000316999 POLA1P09884 1462 aaPredicted RBP25.25■■□□□ 1.63
SMAP1-201ENST00000316999 CARMIL1Q5VZK9 1371 aa25.22■■□□□ 1.63
SMAP1-201ENST00000316999 URB2Q14146 1524 aaKnown RBP25.21■■□□□ 1.63
SMAP1-201ENST00000316999 ZEB1P37275 1124 aaPredicted RBP25.2■■□□□ 1.62
SMAP1-201ENST00000316999 ARAP1Q96P48 1450 aa25.19■■□□□ 1.62
SMAP1-201ENST00000316999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.16■■□□□ 1.62
SMAP1-201ENST00000316999 ABCA10Q8WWZ4 1543 aa25.16■■□□□ 1.62
SMAP1-201ENST00000316999 PDS5BQ9NTI5 1447 aa25.16■■□□□ 1.62
SMAP1-201ENST00000316999 APLP2Q06481 763 aa25.14■■□□□ 1.61
SMAP1-201ENST00000316999 KIF21AQ7Z4S6 1674 aa25.1■■□□□ 1.61
SMAP1-201ENST00000316999 ARHGAP35Q9NRY4 1499 aa25.1■■□□□ 1.61
SMAP1-201ENST00000316999 CCER1Q8TC90 406 aaPredicted RBP25.02■■□□□ 1.6
SMAP1-201ENST00000316999 TDRD9Q8NDG6 1382 aaKnown RBP25■■□□□ 1.59
SMAP1-201ENST00000316999 KANK4Q5T7N3 995 aaPredicted RBP25■■□□□ 1.59
SMAP1-201ENST00000316999 WDR97A6NE52 1622 aa24.99■■□□□ 1.59
SMAP1-201ENST00000316999 HNRNPUL2Q1KMD3 747 aaKnown RBP24.93■■□□□ 1.58
SMAP1-201ENST00000316999 CUL7Q14999 1698 aa24.9■■□□□ 1.58
SMAP1-201ENST00000316999 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
SMAP1-201ENST00000316999 GAPVD1Q14C86 1478 aa24.89■■□□□ 1.57
SMAP1-201ENST00000316999 P3H3Q8IVL6 736 aa24.87■■□□□ 1.57
SMAP1-201ENST00000316999 TARBP1Q13395 1621 aaKnown RBP24.86■■□□□ 1.57
SMAP1-201ENST00000316999 MRC2Q9UBG0 1479 aa24.8■■□□□ 1.56
SMAP1-201ENST00000316999 CTTNBP2Q8WZ74 1663 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms