RNA–Protein interactions for RNA: ENST00000315091.7

TARDBP-202, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-202ENST00000315091 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.16□□□□□ -0.465e-8■■■■■ 204.6
TARDBP-202ENST00000315091 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.91□□□□□ -0.822e-9■■■■■ 44.5
TARDBP-202ENST00000315091 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.05□□□□□ -0.328e-12■■■■■ 35.2
TARDBP-202ENST00000315091 DDX3XO00571 662 aaKnown RBP eCLIP13.61□□□□□ -0.233e-30■■■■■ 33.2
TARDBP-202ENST00000315091 SMNDC1O75940 238 aaKnown RBP eCLIP11.83□□□□□ -0.522e-8■■■■■ 29.2
TARDBP-202ENST00000315091 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.49□□□□□ -0.417e-6■■■■■ 27.5
TARDBP-202ENST00000315091 TARDBPQ13148 414 aaKnown RBP eCLIP11.65□□□□□ -0.551e-13■■■■■ 26.9
TARDBP-202ENST00000315091 RBM22Q9NW64 420 aaKnown RBP eCLIP12.83□□□□□ -0.361e-7■■■■□ 22.6
TARDBP-202ENST00000315091 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.33□□□□□ -0.63e-6■■■■□ 22.6
TARDBP-202ENST00000315091 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.58□□□□□ -0.241e-7■■■■□ 22.4
TARDBP-202ENST00000315091 SRSF7Q16629 238 aaKnown RBP eCLIP10.66□□□□□ -0.72e-10■■■□□ 18.4
TARDBP-202ENST00000315091 GTF2F1P35269 517 aaKnown RBP eCLIP13.74□□□□□ -0.217e-26■■■□□ 18.2
TARDBP-202ENST00000315091 TIA1P31483 386 aaKnown RBP eCLIP12.09□□□□□ -0.472e-7■■■□□ 17.4
TARDBP-202ENST00000315091 U2AF1Q01081 240 aaKnown RBP eCLIP16.61■□□□□ 0.253e-7■■■□□ 15.3
TARDBP-202ENST00000315091 UPF1Q92900 1129 aaKnown RBP eCLIP14.49□□□□□ -0.092e-11■■■□□ 15.1
TARDBP-202ENST00000315091 AQRO60306 1485 aaKnown RBP eCLIP19.65■□□□□ 0.742e-7■■□□□ 14.3
TARDBP-202ENST00000315091 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.99■□□□□ 0.153e-7■■□□□ 13.6
TARDBP-202ENST00000315091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.97■□□□□ 0.472e-9■■□□□ 13.4
TARDBP-202ENST00000315091 HNRNPMP52272 730 aaKnown RBP eCLIP18.36■□□□□ 0.531e-6■■□□□ 12.6
TARDBP-202ENST00000315091 PRPF4O43172 522 aaKnown RBP eCLIP12.82□□□□□ -0.362e-14■■□□□ 12.4
TARDBP-202ENST00000315091 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.09□□□□□ -0.472e-21■■□□□ 12.4
TARDBP-202ENST00000315091 CDC40O60508 579 aaKnown RBP eCLIP11.44□□□□□ -0.585e-6■■□□□ 12.3
TARDBP-202ENST00000315091 GRSF1Q12849 480 aaKnown RBP eCLIP12.25□□□□□ -0.451e-11■■□□□ 12.1
TARDBP-202ENST00000315091 EIF4G2P78344 907 aaKnown RBP eCLIP17.8■□□□□ 0.448e-11■■□□□ 12.1
TARDBP-202ENST00000315091 FUSP35637 526 aaKnown RBP eCLIP7.92□□□□□ -1.143e-10■■□□□ 12.1
TARDBP-202ENST00000315091 ZC3H11AO75152 810 aaKnown RBP eCLIP13.59□□□□□ -0.231e-7■■□□□ 12
TARDBP-202ENST00000315091 LSM11P83369 360 aaKnown RBP eCLIP11.67□□□□□ -0.543e-9■■□□□ 11.9
TARDBP-202ENST00000315091 TIAL1Q01085 375 aaKnown RBP eCLIP12.58□□□□□ -0.46e-7■■□□□ 11.7
TARDBP-202ENST00000315091 FXR2P51116 673 aaKnown RBP eCLIP14.22□□□□□ -0.132e-7■■□□□ 11.5
TARDBP-202ENST00000315091 SRSF1Q07955 248 aaKnown RBP eCLIP10.19□□□□□ -0.783e-8■■□□□ 11.4
TARDBP-202ENST00000315091 KHSRPQ92945 711 aaKnown RBP eCLIP13.24□□□□□ -0.291e-9■□□□□ 11
TARDBP-202ENST00000315091 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.39□□□□□ -0.271e-6■□□□□ 10.9
TARDBP-202ENST00000315091 SF3B4Q15427 424 aaKnown RBP eCLIP10.86□□□□□ -0.674e-7■□□□□ 10.8
TARDBP-202ENST00000315091 U2AF2P26368 475 aaKnown RBP eCLIP14.59□□□□□ -0.072e-10■□□□□ 10.5
TARDBP-202ENST00000315091 DDX6P26196 483 aaKnown RBP eCLIP12.68□□□□□ -0.381e-8■□□□□ 10.3
TARDBP-202ENST00000315091 ZRANB2O95218 330 aaKnown RBP eCLIP13.39□□□□□ -0.275e-13■□□□□ 10.2
TARDBP-202ENST00000315091 G3BP1Q13283 466 aaKnown RBP eCLIP15.45■□□□□ 0.065e-9■□□□□ 10.1
TARDBP-202ENST00000315091 SUB1P53999 127 aaKnown RBP eCLIP10.03□□□□□ -0.81e-11■□□□□ 9.4
TARDBP-202ENST00000315091 ZNF622Q969S3 477 aaKnown RBP eCLIP14.77□□□□□ -0.053e-23■□□□□ 9.1
TARDBP-202ENST00000315091 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.92□□□□□ -0.182e-10■□□□□ 9.1
TARDBP-202ENST00000315091 PPIGQ13427 754 aaKnown RBP eCLIP12.85□□□□□ -0.356e-7■□□□□ 8.8
TARDBP-202ENST00000315091 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.04■□□□□ -02e-12■□□□□ 8.7
TARDBP-202ENST00000315091 ILF3Q12906 894 aaKnown RBP eCLIP12.03□□□□□ -0.486e-6■□□□□ 8.6
TARDBP-202ENST00000315091 NCBP2P52298 156 aaKnown RBP eCLIP11.88□□□□□ -0.513e-10■□□□□ 8.4
TARDBP-202ENST00000315091 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.15□□□□□ -0.143e-13■□□□□ 8.3
TARDBP-202ENST00000315091 YBX3P16989 372 aaKnown RBP eCLIP14.22□□□□□ -0.138e-13■□□□□ 8.1
Retrieved 46 of 46 RNA–protein pairs in 8.2 ms