RNA–Protein interactions for RNA: ENST00000313949.11

GNAS-204, Transcript of GNAS complex locus, humanhuman

TSL 1 (best) BASIC

Gene GNAS, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNAS-204ENST00000313949 TRA2AQ13595 282 aaKnown RBP eCLIP8.73□□□□□ -1.017e-17■■■■■ 73.3
GNAS-204ENST00000313949 GTF2F1P35269 517 aaKnown RBP eCLIP11.43□□□□□ -0.582e-9■■■■■ 69.5
GNAS-204ENST00000313949 AGGF1Q8N302 714 aaeCLIP10.47□□□□□ -0.733e-8■■■■■ 55.1
GNAS-204ENST00000313949 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.09□□□□□ -0.634e-6■■■■■ 41.6
GNAS-204ENST00000313949 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.08□□□□□ -0.82e-7■■■■■ 41
GNAS-204ENST00000313949 SF3B1O75533 1304 aaKnown RBP eCLIP10.12□□□□□ -0.791e-6■■■■■ 35.8
GNAS-204ENST00000313949 NCBP2P52298 156 aaKnown RBP eCLIP9.44□□□□□ -0.93e-11■■■■■ 33.2
GNAS-204ENST00000313949 NONOQ15233 471 aaKnown RBP eCLIP11.26□□□□□ -0.616e-7■■■■■ 32.8
GNAS-204ENST00000313949 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.32□□□□□ -0.762e-9■■■■■ 31.7
GNAS-204ENST00000313949 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.15□□□□□ -0.792e-7■■■■■ 30.3
GNAS-204ENST00000313949 PCBP2Q15366 365 aaKnown RBP eCLIP9.74□□□□□ -0.857e-9■■■■■ 29.2
GNAS-204ENST00000313949 DDX3XO00571 662 aaKnown RBP eCLIP10.89□□□□□ -0.674e-21■■■■■ 29
GNAS-204ENST00000313949 PRPF4O43172 522 aaKnown RBP eCLIP10.25□□□□□ -0.776e-9■■■■■ 27.7
GNAS-204ENST00000313949 SF3B4Q15427 424 aaKnown RBP eCLIP9.48□□□□□ -0.899e-8■■■■■ 27.2
GNAS-204ENST00000313949 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.08□□□□□ -0.962e-11■■■■■ 27
GNAS-204ENST00000313949 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.33□□□□□ -0.762e-8■■■■□ 25.1
GNAS-204ENST00000313949 RBM22Q9NW64 420 aaKnown RBP eCLIP10.16□□□□□ -0.782e-6■■■■□ 24.6
GNAS-204ENST00000313949 SF3A3Q12874 501 aaKnown RBP eCLIP10.72□□□□□ -0.698e-7■■■■□ 24.2
GNAS-204ENST00000313949 CDC40O60508 579 aaKnown RBP eCLIP9.12□□□□□ -0.958e-9■■■■□ 23.3
GNAS-204ENST00000313949 FXR1P51114 621 aaKnown RBP eCLIP11.26□□□□□ -0.616e-7■■■■□ 23.2
GNAS-204ENST00000313949 YWHAGP61981 247 aaKnown RBP eCLIP10.36□□□□□ -0.752e-6■■■■□ 22.9
GNAS-204ENST00000313949 QKIQ96PU8 341 aaKnown RBP eCLIP10.28□□□□□ -0.762e-8■■■■□ 22.2
GNAS-204ENST00000313949 RBFOX2O43251 390 aaKnown RBP eCLIP8.05□□□□□ -1.126e-7■■■■□ 21.9
GNAS-204ENST00000313949 EWSR1Q01844 656 aaKnown RBP eCLIP8.36□□□□□ -1.077e-7■■■■□ 21.8
GNAS-204ENST00000313949 AQRO60306 1485 aaKnown RBP eCLIP15.01□□□□□ -0.016e-9■■■■□ 21.8
GNAS-204ENST00000313949 SRSF1Q07955 248 aaKnown RBP eCLIP7.78□□□□□ -1.161e-7■■■■□ 21.3
GNAS-204ENST00000313949 SFPQP23246 707 aaKnown RBP eCLIP11.3□□□□□ -0.65e-7■■■■□ 20.8
GNAS-204ENST00000313949 HNRNPKP61978 463 aaKnown RBP eCLIP9.12□□□□□ -0.956e-7■■■■□ 20.3
GNAS-204ENST00000313949 PCBP1Q15365 356 aaKnown RBP eCLIP10.21□□□□□ -0.781e-36■■■■□ 20
GNAS-204ENST00000313949 FUSP35637 526 aaKnown RBP eCLIP6.53□□□□□ -1.362e-6■■■□□ 19.1
GNAS-204ENST00000313949 GPKOWQ92917 476 aaPredicted RBP eCLIP11.55□□□□□ -0.562e-7■■■□□ 19.1
GNAS-204ENST00000313949 PABPC4Q13310 644 aaKnown RBP eCLIP11.15□□□□□ -0.632e-20■■■□□ 19.1
GNAS-204ENST00000313949 FTOQ9C0B1 505 aaKnown RBP eCLIP11.91□□□□□ -0.59e-7■■■□□ 18.4
GNAS-204ENST00000313949 EFTUD2Q15029 972 aaKnown RBP eCLIP10.52□□□□□ -0.739e-9■■■□□ 18.1
GNAS-204ENST00000313949 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.05□□□□□ -0.84e-25■■■□□ 18.1
GNAS-204ENST00000313949 TROVE2P10155 538 aaKnown RBP eCLIP10.13□□□□□ -0.792e-7■■■□□ 18
GNAS-204ENST00000313949 PUM1Q14671 1186 aaKnown RBP eCLIP9.48□□□□□ -0.894e-9■■■□□ 17.7
GNAS-204ENST00000313949 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.49□□□□□ -0.731e-7■■■□□ 17.6
GNAS-204ENST00000313949 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.41□□□□□ -0.14e-16■■■□□ 16.9
GNAS-204ENST00000313949 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.08□□□□□ -0.163e-7■■■□□ 16.6
GNAS-204ENST00000313949 XRCC6P12956 609 aaKnown RBP eCLIP12.1□□□□□ -0.474e-10■■■□□ 16.4
GNAS-204ENST00000313949 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8□□□□□ -1.133e-10■■■□□ 16.3
GNAS-204ENST00000313949 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.98□□□□□ -0.651e-6■■■□□ 16.3
GNAS-204ENST00000313949 SMNDC1O75940 238 aaKnown RBP eCLIP10.27□□□□□ -0.774e-7■■■□□ 16.1
GNAS-204ENST00000313949 HNRNPLP14866 589 aaKnown RBP eCLIP10.09□□□□□ -0.792e-7■■■□□ 15.9
GNAS-204ENST00000313949 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.44□□□□□ -0.742e-7■■■□□ 15.7
GNAS-204ENST00000313949 METAP2P50579 478 aaKnown RBP eCLIP11.67□□□□□ -0.542e-8■■■□□ 15.1
GNAS-204ENST00000313949 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.08□□□□□ -0.965e-9■■■□□ 14.8
GNAS-204ENST00000313949 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.44□□□□□ -0.98e-8■■■□□ 14.7
GNAS-204ENST00000313949 HNRNPCP07910 306 aaKnown RBP eCLIP9.82□□□□□ -0.842e-9■■□□□ 14.1
GNAS-204ENST00000313949 UPF1Q92900 1129 aaKnown RBP eCLIP10.87□□□□□ -0.678e-9■■□□□ 14
GNAS-204ENST00000313949 HNRNPMP52272 730 aaKnown RBP eCLIP14.29□□□□□ -0.122e-13■■□□□ 13.8
GNAS-204ENST00000313949 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.72□□□□□ -0.693e-7■■□□□ 13.5
GNAS-204ENST00000313949 YBX3P16989 372 aaKnown RBP eCLIP10.84□□□□□ -0.676e-8■■□□□ 12.7
GNAS-204ENST00000313949 SAFB2Q14151 953 aaKnown RBP eCLIP13.54□□□□□ -0.244e-7■■□□□ 12.5
GNAS-204ENST00000313949 TARDBPQ13148 414 aaKnown RBP eCLIP9.37□□□□□ -0.911e-12■■□□□ 12.4
GNAS-204ENST00000313949 G3BP1Q13283 466 aaKnown RBP eCLIP12.13□□□□□ -0.478e-10■■□□□ 12.3
GNAS-204ENST00000313949 NKRFO15226 690 aaKnown RBP eCLIP11.38□□□□□ -0.592e-10■■□□□ 12.2
GNAS-204ENST00000313949 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.5□□□□□ -1.055e-6■■□□□ 12.2
GNAS-204ENST00000313949 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.67□□□□□ -0.546e-7■■□□□ 11.7
GNAS-204ENST00000313949 TIA1P31483 386 aaKnown RBP eCLIP9.56□□□□□ -0.881e-18■■□□□ 11.5
GNAS-204ENST00000313949 WRNQ14191 1432 aaPredicted RBP eCLIP15.87■□□□□ 0.134e-6■■□□□ 11.4
GNAS-204ENST00000313949 PABPN1Q86U42 306 aaKnown RBP eCLIP16.78■□□□□ 0.281e-59■■□□□ 11.4
GNAS-204ENST00000313949 U2AF2P26368 475 aaKnown RBP eCLIP11.52□□□□□ -0.573e-19■□□□□ 11.3
GNAS-204ENST00000313949 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.74□□□□□ -0.857e-7■□□□□ 11.1
GNAS-204ENST00000313949 RBM5P52756 815 aaKnown RBP eCLIP11.36□□□□□ -0.598e-8■□□□□ 11.1
GNAS-204ENST00000313949 RPS3P23396 243 aaKnown RBP eCLIP9.72□□□□□ -0.855e-14■□□□□ 11
GNAS-204ENST00000313949 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.1□□□□□ -0.951e-6■□□□□ 10.9
GNAS-204ENST00000313949 DDX6P26196 483 aaKnown RBP eCLIP9.62□□□□□ -0.872e-9■□□□□ 10.7
GNAS-204ENST00000313949 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.72□□□□□ -0.532e-7■□□□□ 10.1
GNAS-204ENST00000313949 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.17□□□□□ -0.627e-6■□□□□ 9.9
GNAS-204ENST00000313949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.13□□□□□ -0.154e-8■□□□□ 9.9
GNAS-204ENST00000313949 PPIGQ13427 754 aaKnown RBP eCLIP9.68□□□□□ -0.862e-11■□□□□ 9.8
GNAS-204ENST00000313949 DDX21Q9NR30 783 aaKnown RBP eCLIP12.23□□□□□ -0.455e-6■□□□□ 9.8
GNAS-204ENST00000313949 SUB1P53999 127 aaKnown RBP eCLIP7.85□□□□□ -1.151e-8■□□□□ 9.6
GNAS-204ENST00000313949 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.47□□□□□ -0.731e-13■□□□□ 9.5
GNAS-204ENST00000313949 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.16□□□□□ -0.782e-6■□□□□ 9.5
GNAS-204ENST00000313949 FXR2P51116 673 aaKnown RBP eCLIP11.13□□□□□ -0.634e-9■□□□□ 9.2
GNAS-204ENST00000313949 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.75□□□□□ -0.853e-6■□□□□ 9.2
GNAS-204ENST00000313949 RBM15Q96T37 977 aaKnown RBP eCLIP10.48□□□□□ -0.733e-11■□□□□ 9.2
GNAS-204ENST00000313949 HNRNPUQ00839 825 aaKnown RBP eCLIP13.9□□□□□ -0.182e-8■□□□□ 8.8
GNAS-204ENST00000313949 SND1Q7KZF4 910 aaKnown RBP eCLIP10.81□□□□□ -0.682e-10■□□□□ 8.7
GNAS-204ENST00000313949 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.04□□□□□ -0.82e-6■□□□□ 8.6
GNAS-204ENST00000313949 DDX42Q86XP3 938 aaKnown RBP eCLIP10.85□□□□□ -0.672e-6■□□□□ 8.3
GNAS-204ENST00000313949 FMR1Q06787 632 aaKnown RBP eCLIP11.47□□□□□ -0.578e-7■□□□□ 8.2
Retrieved 85 of 85 RNA–protein pairs in 17.6 ms