RNA: ENST00000313285.12

TRIP10-202, Transcript of thyroid hormone receptor interactor 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIP10, Length 2,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP10-202ENST00000313285 LIN28BQ6ZN17 250 aaKnown RBP eCLIP31.27■■■□□ 2.65e-33■■■■■ 141.2
TRIP10-202ENST00000313285 SF3B1O75533 1304 aaKnown RBP eCLIP31.58■■■□□ 2.652e-6■■■■■ 132.3
TRIP10-202ENST00000313285 TIA1P31483 386 aaKnown RBP eCLIP29.35■■■□□ 2.294e-19■■■■■ 70.7
TRIP10-202ENST00000313285 UTP3Q9NQZ2 479 aaKnown RBP eCLIP32.89■■■□□ 2.861e-8■■■■■ 67.2
TRIP10-202ENST00000313285 RBFOX2O43251 390 aaKnown RBP eCLIP25.13■■□□□ 1.614e-9■■■■■ 40.4
TRIP10-202ENST00000313285 PCBP1Q15365 356 aaKnown RBP eCLIP32.51■■■□□ 2.795e-10■■■■■ 30.9
TRIP10-202ENST00000313285 SF3A3Q12874 501 aaKnown RBP eCLIP31.03■■■□□ 2.561e-6■■■■■ 29.1
TRIP10-202ENST00000313285 SF3B4Q15427 424 aaKnown RBP eCLIP26.28■■□□□ 1.85e-7■■■■■ 27.8
TRIP10-202ENST00000313285 EFTUD2Q15029 972 aaKnown RBP eCLIP31.38■■■□□ 2.613e-7■■■■■ 27
TRIP10-202ENST00000313285 HNRNPKP61978 463 aaKnown RBP eCLIP28.64■■■□□ 2.181e-9■■■■□ 26.2
TRIP10-202ENST00000313285 RBM15Q96T37 977 aaKnown RBP eCLIP31.76■■■□□ 2.681e-7■■■■□ 25.1
TRIP10-202ENST00000313285 DDX24Q9GZR7 859 aaKnown RBP eCLIP36.38■■■■□ 3.414e-7■■■■□ 23.1
TRIP10-202ENST00000313285 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP31.83■■■□□ 2.693e-6■■■■□ 22.8
TRIP10-202ENST00000313285 AQRO60306 1485 aaKnown RBP eCLIP46.78■■■■■ 5.084e-7■■■■□ 21.9
TRIP10-202ENST00000313285 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP44.13■■■■■ 4.666e-6■■■■□ 21.5
TRIP10-202ENST00000313285 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.65■■■□□ 2.668e-9■■■■□ 19.6
TRIP10-202ENST00000313285 PUM2Q8TB72 1066 aaKnown RBP eCLIP29.31■■■□□ 2.281e-13■■■■□ 19.5
TRIP10-202ENST00000313285 PRPF4O43172 522 aaKnown RBP eCLIP31.34■■■□□ 2.611e-6■■■■□ 19.5
TRIP10-202ENST00000313285 ZNF800Q2TB10 664 aaPredicted RBP eCLIP27.65■■■□□ 2.024e-8■■■□□ 19.2
TRIP10-202ENST00000313285 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP23.84■■□□□ 1.414e-7■■■□□ 18.9
TRIP10-202ENST00000313285 QKIQ96PU8 341 aaKnown RBP eCLIP31.58■■■□□ 2.652e-6■■■□□ 18.9
TRIP10-202ENST00000313285 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP33.96■■■■□ 3.034e-7■■■□□ 18.8
TRIP10-202ENST00000313285 ZNF622Q969S3 477 aaKnown RBP eCLIP35.35■■■■□ 3.251e-7■■■□□ 18.3
TRIP10-202ENST00000313285 U2AF2P26368 475 aaKnown RBP eCLIP35.37■■■■□ 3.251e-9■■■□□ 18.1
TRIP10-202ENST00000313285 NCBP2P52298 156 aaKnown RBP eCLIP28.85■■■□□ 2.212e-8■■■□□ 17.5
TRIP10-202ENST00000313285 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP45.57■■■■■ 4.891e-7■■■□□ 16.9
TRIP10-202ENST00000313285 GTF2F1P35269 517 aaKnown RBP eCLIP33.81■■■■□ 34e-10■■■□□ 16.8
TRIP10-202ENST00000313285 DDX6P26196 483 aaKnown RBP eCLIP30.54■■■□□ 2.482e-6■■■□□ 15.6
TRIP10-202ENST00000313285 PPIGQ13427 754 aaKnown RBP eCLIP30.74■■■□□ 2.511e-7■■■□□ 15.4
TRIP10-202ENST00000313285 XPO5Q9HAV4 1204 aaKnown RBP eCLIP34.6■■■■□ 3.131e-9■■■□□ 15
TRIP10-202ENST00000313285 DDX55Q8NHQ9 600 aaKnown RBP eCLIP33.86■■■■□ 3.011e-10■■■□□ 14.8
TRIP10-202ENST00000313285 G3BP1Q13283 466 aaKnown RBP eCLIP37.34■■■■□ 3.574e-7■■■□□ 14.6
TRIP10-202ENST00000313285 BUD13Q9BRD0 619 aaKnown RBP eCLIP32.65■■■□□ 2.826e-7■■□□□ 14.4
TRIP10-202ENST00000313285 PCBP2Q15366 365 aaKnown RBP eCLIP30.06■■■□□ 2.41e-6■■□□□ 14.2
TRIP10-202ENST00000313285 PABPC4Q13310 644 aaKnown RBP eCLIP33.89■■■■□ 3.029e-9■■□□□ 13.1
TRIP10-202ENST00000313285 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP38.36■■■■□ 3.732e-6■■□□□ 12.3
TRIP10-202ENST00000313285 PUM1Q14671 1186 aaKnown RBP eCLIP28.72■■■□□ 2.192e-6■■□□□ 12.1
TRIP10-202ENST00000313285 DDX59Q5T1V6 619 aaKnown RBP eCLIP29.07■■■□□ 2.244e-7■■□□□ 11.4
TRIP10-202ENST00000313285 GRWD1Q9BQ67 446 aaKnown RBP eCLIP43.1■■■■■ 4.492e-8■□□□□ 11.1
TRIP10-202ENST00000313285 XRCC6P12956 609 aaKnown RBP eCLIP35.84■■■■□ 3.334e-6■□□□□ 10.5
TRIP10-202ENST00000313285 MTPAPQ9NVV4 582 aaKnown RBP eCLIP31.25■■■□□ 2.595e-9■□□□□ 9.8
TRIP10-202ENST00000313285 DDX3XO00571 662 aaKnown RBP eCLIP33.05■■■□□ 2.885e-7■□□□□ 9
TRIP10-202ENST00000313285 U2AF1Q01081 240 aaKnown RBP eCLIP40.09■■■■■ 4.013e-7■□□□□ 8.3
TRIP10-202ENST00000313285 NKRFO15226 690 aaKnown RBP eCLIP33.77■■■■□ 39e-6■□□□□ 8.3
TRIP10-202ENST00000313285 TRA2AQ13595 282 aaKnown RBP eCLIP27.87■■■□□ 2.058e-6■□□□□ 8.1
TRIP10-202ENST00000313285 PABPN1Q86U42 306 aaKnown RBP eCLIP51.91■■■■■ 5.93e-7■□□□□ 8
Retrieved 46 of 46 RNA–protein pairs in 10.6 ms