RNA–Protein interactions for RNA: ENST00000312280.7

PMP22-201, Transcript of peripheral myelin protein 22, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMP22, Length 1,810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-201ENST00000312280 NISCHQ9Y2I1 1504 aa35.17■■■■□ 3.22
PMP22-201ENST00000312280 CCDC180Q9P1Z9 1646 aa30.59■■■□□ 2.49
PMP22-201ENST00000312280 ZCCHC6Q5VYS8 1495 aaKnown RBP29.48■■■□□ 2.31
PMP22-201ENST00000312280 DCAF8L2P0C7V8 631 aa29.38■■■□□ 2.29
PMP22-201ENST00000312280 ABCC9O60706 1549 aa29.37■■■□□ 2.29
PMP22-201ENST00000312280 DCAF1Q9Y4B6 1507 aa28.95■■■□□ 2.23
PMP22-201ENST00000312280 SHROOM4Q9ULL8 1493 aa28.8■■■□□ 2.2
PMP22-201ENST00000312280 MYO15BQ96JP2 1530 aa28.66■■■□□ 2.18
PMP22-201ENST00000312280 NACADO15069 1562 aa28.61■■■□□ 2.17
PMP22-201ENST00000312280 RB1CC1Q8TDY2 1594 aa28.42■■■□□ 2.14
PMP22-201ENST00000312280 SCRIBQ14160 1630 aa28.31■■■□□ 2.12
PMP22-201ENST00000312280 UNC13AQ9UPW8 1703 aa27.83■■■□□ 2.05
PMP22-201ENST00000312280 PABPN1Q86U42 306 aaKnown RBP eCLIP27.78■■■□□ 2.04
PMP22-201ENST00000312280 BICRAQ9NZM4 1560 aa27.63■■■□□ 2.01
PMP22-201ENST00000312280 SUPT5HO00267 1087 aaKnown RBP27.62■■■□□ 2.01
PMP22-201ENST00000312280 CECR2Q9BXF3 1484 aa27.45■■□□□ 1.99
PMP22-201ENST00000312280 RSF1Q96T23 1441 aaPredicted RBP27.27■■□□□ 1.96
PMP22-201ENST00000312280 MROH2BQ7Z745 1585 aa27.23■■□□□ 1.95
PMP22-201ENST00000312280 BAZ1AQ9NRL2 1556 aaPredicted RBP27.12■■□□□ 1.93
PMP22-201ENST00000312280 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
PMP22-201ENST00000312280 WIZO95785 1651 aa26.97■■□□□ 1.91
PMP22-201ENST00000312280 EIF4G1Q04637 1599 aaKnown RBP26.81■■□□□ 1.88
PMP22-201ENST00000312280 ATAD2BQ9ULI0 1458 aa26.7■■□□□ 1.87
PMP22-201ENST00000312280 PEG3Q9GZU2 1588 aa26.65■■□□□ 1.86
PMP22-201ENST00000312280 TOP2AP11388 1531 aaKnown RBP26.62■■□□□ 1.85
PMP22-201ENST00000312280 SMARCA2P51531 1590 aa26.6■■□□□ 1.85
PMP22-201ENST00000312280 BAZ1BQ9UIG0 1483 aaKnown RBP26.53■■□□□ 1.84
PMP22-201ENST00000312280 CC2D2AQ9P2K1 1620 aa26.48■■□□□ 1.83
PMP22-201ENST00000312280 NCAPD3P42695 1498 aa26.47■■□□□ 1.83
PMP22-201ENST00000312280 CCDC88BA6NC98 1476 aa26.44■■□□□ 1.82
PMP22-201ENST00000312280 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
PMP22-201ENST00000312280 CHIC1Q5VXU3 224 aa26.26■■□□□ 1.79
PMP22-201ENST00000312280 DNAJC5BQ9UF47 199 aa26.2■■□□□ 1.78
PMP22-201ENST00000312280 TRIM41Q8WV44 630 aa25.89■■□□□ 1.74
PMP22-201ENST00000312280 ABCC8Q09428 1581 aa25.85■■□□□ 1.73
PMP22-201ENST00000312280 CFTRP13569 1480 aa25.84■■□□□ 1.73
PMP22-201ENST00000312280 CADPSQ9ULU8 1353 aa25.83■■□□□ 1.73
PMP22-201ENST00000312280 NESP48681 1621 aa25.74■■□□□ 1.71
PMP22-201ENST00000312280 WRNQ14191 1432 aaPredicted RBP eCLIP25.65■■□□□ 1.7
PMP22-201ENST00000312280 SYNJ1O43426 1573 aa25.55■■□□□ 1.68
PMP22-201ENST00000312280 FAM9AQ8IZU1 332 aaPredicted RBP25.55■■□□□ 1.68
PMP22-201ENST00000312280 LAMC3Q9Y6N6 1575 aa25.54■■□□□ 1.68
PMP22-201ENST00000312280 FANCD2Q9BXW9 1451 aa25.54■■□□□ 1.68
PMP22-201ENST00000312280 PRDM2Q13029 1718 aa25.51■■□□□ 1.67
PMP22-201ENST00000312280 CUX1P39880 1505 aa25.45■■□□□ 1.66
PMP22-201ENST00000312280 PDS5BQ9NTI5 1447 aa25.42■■□□□ 1.66
PMP22-201ENST00000312280 TOP2BQ02880 1626 aa25.39■■□□□ 1.66
PMP22-201ENST00000312280 CEP164Q9UPV0 1460 aa25.36■■□□□ 1.65
PMP22-201ENST00000312280 LOC105371045A0A1W2PR82 267 aa25.36■■□□□ 1.65
PMP22-201ENST00000312280 SOGA1O94964 1423 aa25.36■■□□□ 1.65
PMP22-201ENST00000312280 BIVM-ERCC5R4GMW8 1640 aa25.33■■□□□ 1.65
PMP22-201ENST00000312280 RUSC2Q8N2Y8 1516 aa25.3■■□□□ 1.64
PMP22-201ENST00000312280 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
PMP22-201ENST00000312280 EHMT2Q96KQ7 1210 aa25.29■■□□□ 1.64
PMP22-201ENST00000312280 URB2Q14146 1524 aaKnown RBP25.24■■□□□ 1.63
PMP22-201ENST00000312280 TOPBP1Q92547 1522 aa25.23■■□□□ 1.63
PMP22-201ENST00000312280 DNMBPQ6XZF7 1577 aa25.21■■□□□ 1.63
PMP22-201ENST00000312280 FGD5Q6ZNL6 1462 aa25.2■■□□□ 1.62
PMP22-201ENST00000312280 ERCC6Q03468 1493 aa25.16■■□□□ 1.62
PMP22-201ENST00000312280 CSRNP3Q8WYN3 585 aa25.13■■□□□ 1.61
PMP22-201ENST00000312280 POLA1P09884 1462 aaPredicted RBP25.1■■□□□ 1.61
PMP22-201ENST00000312280 MRC2Q9UBG0 1479 aa25.1■■□□□ 1.61
PMP22-201ENST00000312280 RAD54L2Q9Y4B4 1467 aa25.1■■□□□ 1.61
PMP22-201ENST00000312280 EEA1Q15075 1411 aa25.08■■□□□ 1.61
PMP22-201ENST00000312280 CUX2O14529 1486 aa25.03■■□□□ 1.6
PMP22-201ENST00000312280 KIF27Q86VH2 1401 aa25■■□□□ 1.59
PMP22-201ENST00000312280 WDR62O43379 1518 aa24.94■■□□□ 1.58
PMP22-201ENST00000312280 ABCA10Q8WWZ4 1543 aa24.92■■□□□ 1.58
PMP22-201ENST00000312280 THOC2Q8NI27 1593 aaKnown RBP24.91■■□□□ 1.58
PMP22-201ENST00000312280 TDRD9Q8NDG6 1382 aaKnown RBP24.9■■□□□ 1.58
PMP22-201ENST00000312280 IGF1RP08069 1367 aa24.87■■□□□ 1.57
PMP22-201ENST00000312280 UBTFP17480 764 aaKnown RBP24.85■■□□□ 1.57
PMP22-201ENST00000312280 TARBP1Q13395 1621 aaKnown RBP24.82■■□□□ 1.56
PMP22-201ENST00000312280 RAPGEF2Q9Y4G8 1499 aa24.81■■□□□ 1.56
PMP22-201ENST00000312280 GOLGA3Q08378 1498 aa24.8■■□□□ 1.56
PMP22-201ENST00000312280 PRXQ9BXM0 1461 aa24.78■■□□□ 1.56
PMP22-201ENST00000312280 WDR97A6NE52 1622 aa24.78■■□□□ 1.56
PMP22-201ENST00000312280 KIF21BO75037 1637 aa24.77■■□□□ 1.56
PMP22-201ENST00000312280 AQRO60306 1485 aaKnown RBP eCLIP24.75■■□□□ 1.55
PMP22-201ENST00000312280 IFT140Q96RY7 1462 aa24.75■■□□□ 1.55
PMP22-201ENST00000312280 GAPVD1Q14C86 1478 aa24.74■■□□□ 1.55
PMP22-201ENST00000312280 ZNF608Q9ULD9 1512 aaPredicted RBP24.74■■□□□ 1.55
PMP22-201ENST00000312280 CARMIL1Q5VZK9 1371 aa24.73■■□□□ 1.55
PMP22-201ENST00000312280 TNIKQ9UKE5 1360 aa24.71■■□□□ 1.55
PMP22-201ENST00000312280 ABCA5Q8WWZ7 1642 aa24.7■■□□□ 1.54
PMP22-201ENST00000312280 RANGAP1P46060 587 aaPredicted RBP24.64■■□□□ 1.54
PMP22-201ENST00000312280 ERICH3Q5RHP9 1530 aa24.64■■□□□ 1.53
PMP22-201ENST00000312280 CEP162Q5TB80 1403 aa24.6■■□□□ 1.53
PMP22-201ENST00000312280 GRIN2BQ13224 1484 aa24.55■■□□□ 1.52
PMP22-201ENST00000312280 EIF4G3O43432 1585 aaKnown RBP24.53■■□□□ 1.52
PMP22-201ENST00000312280 CUL7Q14999 1698 aa24.52■■□□□ 1.52
PMP22-201ENST00000312280 PBRM1Q86U86 1689 aa24.52■■□□□ 1.52
PMP22-201ENST00000312280 SNAPC4Q5SXM2 1469 aa24.46■■□□□ 1.51
PMP22-201ENST00000312280 FHAD1B1AJZ9 1412 aa24.45■■□□□ 1.51
PMP22-201ENST00000312280 CLIP1P30622 1438 aa24.45■■□□□ 1.51
PMP22-201ENST00000312280 ADAMTS12P58397 1594 aa24.41■■□□□ 1.5
PMP22-201ENST00000312280 FBLN2P98095 1184 aa24.37■■□□□ 1.49
PMP22-201ENST00000312280 CHMP7Q8WUX9 453 aaPredicted RBP24.33■■□□□ 1.49
PMP22-201ENST00000312280 MAGI1Q96QZ7 1491 aaPredicted RBP24.33■■□□□ 1.48
PMP22-201ENST00000312280 P3H3Q8IVL6 736 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms