RNA–Protein interactions for RNA: ENST00000308284.10

SEC16B-201, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC16B, Length 3,985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-201ENST00000308284 NISCHQ9Y2I1 1504 aa21.03■□□□□ 0.96
SEC16B-201ENST00000308284 SHROOM4Q9ULL8 1493 aa18.17■□□□□ 0.5
SEC16B-201ENST00000308284 ZCCHC6Q5VYS8 1495 aaKnown RBP17.88■□□□□ 0.45
SEC16B-201ENST00000308284 SUPT5HO00267 1087 aaKnown RBP17.87■□□□□ 0.45
SEC16B-201ENST00000308284 MYO15BQ96JP2 1530 aa17.87■□□□□ 0.45
SEC16B-201ENST00000308284 CCDC180Q9P1Z9 1646 aa17.7■□□□□ 0.42
SEC16B-201ENST00000308284 CHIC1Q5VXU3 224 aa17.62■□□□□ 0.41
SEC16B-201ENST00000308284 HRCP23327 699 aa17.61■□□□□ 0.41
SEC16B-201ENST00000308284 PCGF6Q9BYE7 350 aa17.35■□□□□ 0.37
SEC16B-201ENST00000308284 PPARGC1BQ86YN6 1023 aaKnown RBP17.34■□□□□ 0.37
SEC16B-201ENST00000308284 DCAF1Q9Y4B6 1507 aa17.24■□□□□ 0.35
SEC16B-201ENST00000308284 LOC105371045A0A1W2PR82 267 aa17.16■□□□□ 0.34
SEC16B-201ENST00000308284 DCAF8L2P0C7V8 631 aa17.13■□□□□ 0.33
SEC16B-201ENST00000308284 ABCC9O60706 1549 aa16.96■□□□□ 0.31
SEC16B-201ENST00000308284 TRIM26Q12899 539 aaPredicted RBP16.87■□□□□ 0.29
SEC16B-201ENST00000308284 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
SEC16B-201ENST00000308284 RB1CC1Q8TDY2 1594 aa16.76■□□□□ 0.27
SEC16B-201ENST00000308284 SCRIBQ14160 1630 aa16.71■□□□□ 0.27
SEC16B-201ENST00000308284 TRIM41Q8WV44 630 aa16.54■□□□□ 0.24
SEC16B-201ENST00000308284 SCAF1Q9H7N4 1312 aaKnown RBP16.54■□□□□ 0.24
SEC16B-201ENST00000308284 FAM9AQ8IZU1 332 aaPredicted RBP16.51■□□□□ 0.23
SEC16B-201ENST00000308284 ZEB1P37275 1124 aaPredicted RBP16.5■□□□□ 0.23
SEC16B-201ENST00000308284 CECR2Q9BXF3 1484 aa16.47■□□□□ 0.23
SEC16B-201ENST00000308284 MROH2BQ7Z745 1585 aa16.44■□□□□ 0.22
SEC16B-201ENST00000308284 EIF4G1Q04637 1599 aaKnown RBP16.42■□□□□ 0.22
SEC16B-201ENST00000308284 WIZO95785 1651 aa16.4■□□□□ 0.22
SEC16B-201ENST00000308284 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
SEC16B-201ENST00000308284 BAZ1AQ9NRL2 1556 aaPredicted RBP16.25■□□□□ 0.19
SEC16B-201ENST00000308284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.23■□□□□ 0.19
SEC16B-201ENST00000308284 NACADO15069 1562 aa16.22■□□□□ 0.19
SEC16B-201ENST00000308284 PELP1Q8IZL8 1130 aaKnown RBP16.21■□□□□ 0.19
SEC16B-201ENST00000308284 NEUROD1Q13562 356 aa16.17■□□□□ 0.18
SEC16B-201ENST00000308284 ABCC8Q09428 1581 aa16.15■□□□□ 0.18
SEC16B-201ENST00000308284 ACIN1Q9UKV3 1341 aaKnown RBP16.13■□□□□ 0.17
SEC16B-201ENST00000308284 CCDC88BA6NC98 1476 aa16.11■□□□□ 0.17
SEC16B-201ENST00000308284 WRNQ14191 1432 aaPredicted RBP eCLIP16.1■□□□□ 0.17
SEC16B-201ENST00000308284 CCER1Q8TC90 406 aaPredicted RBP16.06■□□□□ 0.16
SEC16B-201ENST00000308284 TOP2AP11388 1531 aaKnown RBP16.03■□□□□ 0.16
SEC16B-201ENST00000308284 SMARCA2P51531 1590 aa16.03■□□□□ 0.16
SEC16B-201ENST00000308284 SOGA1O94964 1423 aa16.02■□□□□ 0.15
SEC16B-201ENST00000308284 CEP162Q5TB80 1403 aa16.02■□□□□ 0.15
SEC16B-201ENST00000308284 RUSC2Q8N2Y8 1516 aa16■□□□□ 0.15
SEC16B-201ENST00000308284 DIEXFQ68CQ4 756 aaKnown RBP15.99■□□□□ 0.15
SEC16B-201ENST00000308284 SMARCA4P51532 1647 aa15.98■□□□□ 0.15
SEC16B-201ENST00000308284 GTF3C3Q9Y5Q9 886 aa15.96■□□□□ 0.15
SEC16B-201ENST00000308284 UNC13AQ9UPW8 1703 aa15.96■□□□□ 0.14
SEC16B-201ENST00000308284 TTBK1Q5TCY1 1321 aaPredicted RBP15.95■□□□□ 0.14
SEC16B-201ENST00000308284 TNIKQ9UKE5 1360 aa15.92■□□□□ 0.14
SEC16B-201ENST00000308284 ZNF316A6NFI3 1004 aaPredicted RBP15.77■□□□□ 0.12
SEC16B-201ENST00000308284 CSRNP3Q8WYN3 585 aa15.77■□□□□ 0.12
SEC16B-201ENST00000308284 EEA1Q15075 1411 aa15.76■□□□□ 0.11
SEC16B-201ENST00000308284 CENPBP07199 599 aaPredicted RBP15.76■□□□□ 0.11
SEC16B-201ENST00000308284 GOLGA3Q08378 1498 aa15.75■□□□□ 0.11
SEC16B-201ENST00000308284 SYNJ1O43426 1573 aa15.75■□□□□ 0.11
SEC16B-201ENST00000308284 KIF21BO75037 1637 aa15.71■□□□□ 0.11
SEC16B-201ENST00000308284 MIER1Q8N108 512 aa15.71■□□□□ 0.11
SEC16B-201ENST00000308284 UBTFP17480 764 aaKnown RBP15.67■□□□□ 0.1
SEC16B-201ENST00000308284 BICRAQ9NZM4 1560 aa15.66■□□□□ 0.1
SEC16B-201ENST00000308284 PEG3Q9GZU2 1588 aa15.65■□□□□ 0.1
SEC16B-201ENST00000308284 YTHDC1Q96MU7 727 aaKnown RBP15.64■□□□□ 0.09
SEC16B-201ENST00000308284 CLIP1P30622 1438 aa15.63■□□□□ 0.09
SEC16B-201ENST00000308284 CEP164Q9UPV0 1460 aa15.62■□□□□ 0.09
SEC16B-201ENST00000308284 HNRNPUL2Q1KMD3 747 aaKnown RBP15.61■□□□□ 0.09
SEC16B-201ENST00000308284 RAPGEF2Q9Y4G8 1499 aa15.6■□□□□ 0.09
SEC16B-201ENST00000308284 VPS8Q8N3P4 1428 aa15.6■□□□□ 0.09
SEC16B-201ENST00000308284 BAZ1BQ9UIG0 1483 aaKnown RBP15.54■□□□□ 0.08
SEC16B-201ENST00000308284 DHX57Q6P158 1386 aaKnown RBP15.47■□□□□ 0.07
SEC16B-201ENST00000308284 PABPN1Q86U42 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
SEC16B-201ENST00000308284 TOP2BQ02880 1626 aa15.45■□□□□ 0.06
SEC16B-201ENST00000308284 ARAP1Q96P48 1450 aa15.45■□□□□ 0.06
SEC16B-201ENST00000308284 ATAD2BQ9ULI0 1458 aa15.44■□□□□ 0.06
SEC16B-201ENST00000308284 BIVM-ERCC5R4GMW8 1640 aa15.42■□□□□ 0.06
SEC16B-201ENST00000308284 PRXQ9BXM0 1461 aa15.38■□□□□ 0.05
SEC16B-201ENST00000308284 KANK4Q5T7N3 995 aaPredicted RBP15.38■□□□□ 0.05
SEC16B-201ENST00000308284 MYT1Q01538 1121 aa15.37■□□□□ 0.05
SEC16B-201ENST00000308284 RANGAP1P46060 587 aaPredicted RBP15.36■□□□□ 0.05
SEC16B-201ENST00000308284 ERICH3Q5RHP9 1530 aa15.36■□□□□ 0.05
SEC16B-201ENST00000308284 CUX2O14529 1486 aa15.33■□□□□ 0.05
SEC16B-201ENST00000308284 SUPT16HQ9Y5B9 1047 aaKnown RBP15.33■□□□□ 0.04
SEC16B-201ENST00000308284 RRBP1Q9P2E9 1410 aaKnown RBP15.33■□□□□ 0.04
SEC16B-201ENST00000308284 CLSPNQ9HAW4 1339 aa15.32■□□□□ 0.04
SEC16B-201ENST00000308284 CUX1P39880 1505 aa15.27■□□□□ 0.03
SEC16B-201ENST00000308284 MAPKBP1O60336 1514 aa15.26■□□□□ 0.03
SEC16B-201ENST00000308284 KCNH8Q96L42 1107 aa15.25■□□□□ 0.03
SEC16B-201ENST00000308284 APLP2Q06481 763 aa15.24■□□□□ 0.03
SEC16B-201ENST00000308284 ARHGAP35Q9NRY4 1499 aa15.23■□□□□ 0.03
SEC16B-201ENST00000308284 TSHZ2Q9NRE2 1034 aa15.19■□□□□ 0.02
SEC16B-201ENST00000308284 CCNB3Q8WWL7 1395 aa15.16■□□□□ 0.02
SEC16B-201ENST00000308284 RAB3GAP2Q9H2M9 1393 aa15.12■□□□□ 0.01
SEC16B-201ENST00000308284 WDR97A6NE52 1622 aa15.12■□□□□ 0.01
SEC16B-201ENST00000308284 TIAM1Q13009 1591 aa15.1■□□□□ 0.01
SEC16B-201ENST00000308284 KIF27Q86VH2 1401 aa15.08■□□□□ 0.01
SEC16B-201ENST00000308284 HMGXB3Q12766 1538 aa15.08■□□□□ 0
SEC16B-201ENST00000308284 CFTRP13569 1480 aa15.04■□□□□ -0
SEC16B-201ENST00000308284 PHLDB1Q86UU1 1377 aa15.04■□□□□ -0
SEC16B-201ENST00000308284 MAP3K1Q13233 1512 aa15.04■□□□□ -0
SEC16B-201ENST00000308284 NCAPD3P42695 1498 aa15.04■□□□□ -0
SEC16B-201ENST00000308284 ITGAEP38570 1179 aa15.04■□□□□ -0
SEC16B-201ENST00000308284 PRDM2Q13029 1718 aa15.03■□□□□ -0
SEC16B-201ENST00000308284 CFAP43Q8NDM7 1665 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms