RNA–Protein interactions for RNA: ENST00000308018.8

MRPS12-201, Transcript of mitochondrial ribosomal protein S12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS12, Length 1,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS12-201ENST00000308018 NISCHQ9Y2I1 1504 aa35.91■■■■□ 3.34
MRPS12-201ENST00000308018 CCDC180Q9P1Z9 1646 aa32.08■■■□□ 2.73
MRPS12-201ENST00000308018 ABCC9O60706 1549 aa31.59■■■□□ 2.65
MRPS12-201ENST00000308018 RB1CC1Q8TDY2 1594 aa30.31■■■□□ 2.44
MRPS12-201ENST00000308018 NACADO15069 1562 aa30.22■■■□□ 2.43
MRPS12-201ENST00000308018 MYO15BQ96JP2 1530 aa30.01■■■□□ 2.39
MRPS12-201ENST00000308018 DCAF8L2P0C7V8 631 aa29.99■■■□□ 2.39
MRPS12-201ENST00000308018 ZCCHC6Q5VYS8 1495 aaKnown RBP29.85■■■□□ 2.37
MRPS12-201ENST00000308018 DCAF1Q9Y4B6 1507 aa29.75■■■□□ 2.35
MRPS12-201ENST00000308018 UNC13AQ9UPW8 1703 aa29.65■■■□□ 2.34
MRPS12-201ENST00000308018 PABPN1Q86U42 306 aaKnown RBP eCLIP29.45■■■□□ 2.31
MRPS12-201ENST00000308018 BICRAQ9NZM4 1560 aa29.43■■■□□ 2.3
MRPS12-201ENST00000308018 DNAJC5BQ9UF47 199 aa29.31■■■□□ 2.28
MRPS12-201ENST00000308018 SCRIBQ14160 1630 aa29.16■■■□□ 2.26
MRPS12-201ENST00000308018 SHROOM4Q9ULL8 1493 aa29.12■■■□□ 2.25
MRPS12-201ENST00000308018 EIF4G1Q04637 1599 aaKnown RBP28.65■■■□□ 2.18
MRPS12-201ENST00000308018 CC2D2AQ9P2K1 1620 aa28.6■■■□□ 2.17
MRPS12-201ENST00000308018 CECR2Q9BXF3 1484 aa28.44■■■□□ 2.14
MRPS12-201ENST00000308018 SMARCA4P51532 1647 aa27.91■■■□□ 2.06
MRPS12-201ENST00000308018 NCAPD3P42695 1498 aa27.9■■■□□ 2.06
MRPS12-201ENST00000308018 BAZ1AQ9NRL2 1556 aaPredicted RBP27.85■■■□□ 2.05
MRPS12-201ENST00000308018 ATAD2BQ9ULI0 1458 aa27.84■■■□□ 2.05
MRPS12-201ENST00000308018 SMARCA2P51531 1590 aa27.79■■■□□ 2.04
MRPS12-201ENST00000308018 HMGXB3Q12766 1538 aa27.72■■■□□ 2.03
MRPS12-201ENST00000308018 PEG3Q9GZU2 1588 aa27.7■■■□□ 2.03
MRPS12-201ENST00000308018 MROH2BQ7Z745 1585 aa27.65■■■□□ 2.02
MRPS12-201ENST00000308018 BAZ1BQ9UIG0 1483 aaKnown RBP27.57■■■□□ 2
MRPS12-201ENST00000308018 WIZO95785 1651 aa27.33■■□□□ 1.97
MRPS12-201ENST00000308018 NESP48681 1621 aa27.26■■□□□ 1.95
MRPS12-201ENST00000308018 ERCC6Q03468 1493 aa27.23■■□□□ 1.95
MRPS12-201ENST00000308018 RSF1Q96T23 1441 aaPredicted RBP27.23■■□□□ 1.95
MRPS12-201ENST00000308018 LAMC3Q9Y6N6 1575 aa27.2■■□□□ 1.94
MRPS12-201ENST00000308018 CUX2O14529 1486 aa27.13■■□□□ 1.93
MRPS12-201ENST00000308018 CADPSQ9ULU8 1353 aa27.05■■□□□ 1.92
MRPS12-201ENST00000308018 TOP2AP11388 1531 aaKnown RBP27.03■■□□□ 1.92
MRPS12-201ENST00000308018 PDS5BQ9NTI5 1447 aa27■■□□□ 1.91
MRPS12-201ENST00000308018 THOC2Q8NI27 1593 aaKnown RBP26.95■■□□□ 1.9
MRPS12-201ENST00000308018 KIF21AQ7Z4S6 1674 aa26.95■■□□□ 1.9
MRPS12-201ENST00000308018 CFTRP13569 1480 aa26.83■■□□□ 1.89
MRPS12-201ENST00000308018 MRC2Q9UBG0 1479 aa26.74■■□□□ 1.87
MRPS12-201ENST00000308018 CCDC88BA6NC98 1476 aa26.72■■□□□ 1.87
MRPS12-201ENST00000308018 FANCD2Q9BXW9 1451 aa26.71■■□□□ 1.87
MRPS12-201ENST00000308018 CEP164Q9UPV0 1460 aa26.7■■□□□ 1.87
MRPS12-201ENST00000308018 WDR62O43379 1518 aa26.68■■□□□ 1.86
MRPS12-201ENST00000308018 DNAJC5Q9H3Z4 198 aa26.65■■□□□ 1.86
MRPS12-201ENST00000308018 PRDM2Q13029 1718 aa26.62■■□□□ 1.85
MRPS12-201ENST00000308018 URB2Q14146 1524 aaKnown RBP26.48■■□□□ 1.83
MRPS12-201ENST00000308018 ABCC8Q09428 1581 aa26.28■■□□□ 1.8
MRPS12-201ENST00000308018 TOPBP1Q92547 1522 aa26.26■■□□□ 1.79
MRPS12-201ENST00000308018 SUPT5HO00267 1087 aaKnown RBP26.22■■□□□ 1.79
MRPS12-201ENST00000308018 DNMBPQ6XZF7 1577 aa26.21■■□□□ 1.79
MRPS12-201ENST00000308018 IFT140Q96RY7 1462 aa26.17■■□□□ 1.78
MRPS12-201ENST00000308018 ZNF608Q9ULD9 1512 aaPredicted RBP26.06■■□□□ 1.76
MRPS12-201ENST00000308018 TARBP1Q13395 1621 aaKnown RBP26.03■■□□□ 1.76
MRPS12-201ENST00000308018 POLA1P09884 1462 aaPredicted RBP26.02■■□□□ 1.76
MRPS12-201ENST00000308018 EIF4G3O43432 1585 aaKnown RBP25.95■■□□□ 1.75
MRPS12-201ENST00000308018 CUX1P39880 1505 aa25.95■■□□□ 1.74
MRPS12-201ENST00000308018 OSCARQ8IYS5 282 aa25.92■■□□□ 1.74
MRPS12-201ENST00000308018 SOGA1O94964 1423 aa25.9■■□□□ 1.74
MRPS12-201ENST00000308018 FGD5Q6ZNL6 1462 aa25.9■■□□□ 1.74
MRPS12-201ENST00000308018 RAD54L2Q9Y4B4 1467 aa25.89■■□□□ 1.73
MRPS12-201ENST00000308018 AQRO60306 1485 aaKnown RBP eCLIP25.87■■□□□ 1.73
MRPS12-201ENST00000308018 WDR97A6NE52 1622 aa25.83■■□□□ 1.73
MRPS12-201ENST00000308018 TDRD9Q8NDG6 1382 aaKnown RBP25.77■■□□□ 1.72
MRPS12-201ENST00000308018 CHD1O14646 1710 aa25.68■■□□□ 1.7
MRPS12-201ENST00000308018 TOP2BQ02880 1626 aa25.67■■□□□ 1.7
MRPS12-201ENST00000308018 BIVM-ERCC5R4GMW8 1640 aa25.67■■□□□ 1.7
MRPS12-201ENST00000308018 ABCA10Q8WWZ4 1543 aa25.67■■□□□ 1.7
MRPS12-201ENST00000308018 WRNQ14191 1432 aaPredicted RBP eCLIP25.66■■□□□ 1.7
MRPS12-201ENST00000308018 GRIN2BQ13224 1484 aa25.64■■□□□ 1.69
MRPS12-201ENST00000308018 SYNJ1O43426 1573 aa25.62■■□□□ 1.69
MRPS12-201ENST00000308018 SNAPC4Q5SXM2 1469 aa25.62■■□□□ 1.69
MRPS12-201ENST00000308018 MAGI1Q96QZ7 1491 aaPredicted RBP25.62■■□□□ 1.69
MRPS12-201ENST00000308018 GAPVD1Q14C86 1478 aa25.6■■□□□ 1.69
MRPS12-201ENST00000308018 ABCA5Q8WWZ7 1642 aa25.59■■□□□ 1.69
MRPS12-201ENST00000308018 PBRM1Q86U86 1689 aa25.57■■□□□ 1.68
MRPS12-201ENST00000308018 FBLN2P98095 1184 aa25.56■■□□□ 1.68
MRPS12-201ENST00000308018 RIMBP3CA6NJZ7 1639 aa25.55■■□□□ 1.68
MRPS12-201ENST00000308018 RIMBP3BA6NNM3 1639 aa25.55■■□□□ 1.68
MRPS12-201ENST00000308018 RIMBP3Q9UFD9 1639 aa25.55■■□□□ 1.68
MRPS12-201ENST00000308018 TRIM41Q8WV44 630 aa25.53■■□□□ 1.68
MRPS12-201ENST00000308018 SYNJ2O15056 1496 aa25.51■■□□□ 1.67
MRPS12-201ENST00000308018 ARHGEF11O15085 1522 aa25.51■■□□□ 1.67
MRPS12-201ENST00000308018 CHMP7Q8WUX9 453 aaPredicted RBP25.49■■□□□ 1.67
MRPS12-201ENST00000308018 CLASP1Q7Z460 1538 aa25.43■■□□□ 1.66
MRPS12-201ENST00000308018 ERICH3Q5RHP9 1530 aa25.36■■□□□ 1.65
MRPS12-201ENST00000308018 ADAMTS12P58397 1594 aa25.35■■□□□ 1.65
MRPS12-201ENST00000308018 GRIN2AQ12879 1464 aa25.31■■□□□ 1.64
MRPS12-201ENST00000308018 FHAD1B1AJZ9 1412 aa25.3■■□□□ 1.64
MRPS12-201ENST00000308018 ARAP1Q96P48 1450 aa25.28■■□□□ 1.64
MRPS12-201ENST00000308018 CYB5RLQ6IPT4 315 aa25.25■■□□□ 1.63
MRPS12-201ENST00000308018 NUP160Q12769 1436 aa25.23■■□□□ 1.63
MRPS12-201ENST00000308018 CEP170Q5SW79 1584 aa25.2■■□□□ 1.62
MRPS12-201ENST00000308018 KIF27Q86VH2 1401 aa25.15■■□□□ 1.62
MRPS12-201ENST00000308018 IGF1RP08069 1367 aa25.11■■□□□ 1.61
MRPS12-201ENST00000308018 SHROOM2Q13796 1616 aa25.09■■□□□ 1.61
MRPS12-201ENST00000308018 CUL7Q14999 1698 aa25.06■■□□□ 1.6
MRPS12-201ENST00000308018 ERCC6L2Q5T890 1561 aa25.02■■□□□ 1.6
MRPS12-201ENST00000308018 RUSC2Q8N2Y8 1516 aa24.98■■□□□ 1.59
MRPS12-201ENST00000308018 JPH4Q96JJ6 628 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms