RNA–Protein interactions for RNA: ENST00000307297.8

PATJ-201, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 2 BASIC

Gene PATJ, Length 1,585 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-201ENST00000307297 NISCHQ9Y2I1 1504 aa26.23■■□□□ 1.79
PATJ-201ENST00000307297 CCDC180Q9P1Z9 1646 aa23.27■■□□□ 1.32
PATJ-201ENST00000307297 ABCC9O60706 1549 aa22.36■■□□□ 1.17
PATJ-201ENST00000307297 ZCCHC6Q5VYS8 1495 aaKnown RBP21.94■■□□□ 1.1
PATJ-201ENST00000307297 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
PATJ-201ENST00000307297 NACADO15069 1562 aa21.74■■□□□ 1.07
PATJ-201ENST00000307297 DCAF1Q9Y4B6 1507 aa21.74■■□□□ 1.07
PATJ-201ENST00000307297 RB1CC1Q8TDY2 1594 aa21.71■■□□□ 1.07
PATJ-201ENST00000307297 MYO15BQ96JP2 1530 aa21.7■■□□□ 1.06
PATJ-201ENST00000307297 AEBP2Q6ZN18 517 aaPredicted RBP21.58■■□□□ 1.05
PATJ-201ENST00000307297 UNC13AQ9UPW8 1703 aa21.25■□□□□ 0.99
PATJ-201ENST00000307297 SCRIBQ14160 1630 aa21.23■□□□□ 0.99
PATJ-201ENST00000307297 BICRAQ9NZM4 1560 aa20.96■□□□□ 0.95
PATJ-201ENST00000307297 SHROOM4Q9ULL8 1493 aa20.93■□□□□ 0.94
PATJ-201ENST00000307297 CHIC1Q5VXU3 224 aa20.93■□□□□ 0.94
PATJ-201ENST00000307297 PABPN1Q86U42 306 aaKnown RBP eCLIP20.89■□□□□ 0.94
PATJ-201ENST00000307297 EIF4G1Q04637 1599 aaKnown RBP20.43■□□□□ 0.86
PATJ-201ENST00000307297 BAZ1AQ9NRL2 1556 aaPredicted RBP20.36■□□□□ 0.85
PATJ-201ENST00000307297 CECR2Q9BXF3 1484 aa20.36■□□□□ 0.85
PATJ-201ENST00000307297 SMARCA4P51532 1647 aa20.33■□□□□ 0.84
PATJ-201ENST00000307297 CC2D2AQ9P2K1 1620 aa20.26■□□□□ 0.83
PATJ-201ENST00000307297 MROH2BQ7Z745 1585 aa20.21■□□□□ 0.83
PATJ-201ENST00000307297 SMARCA2P51531 1590 aa20.14■□□□□ 0.81
PATJ-201ENST00000307297 PEG3Q9GZU2 1588 aa20.1■□□□□ 0.81
PATJ-201ENST00000307297 RSF1Q96T23 1441 aaPredicted RBP20.09■□□□□ 0.81
PATJ-201ENST00000307297 DNAJC5BQ9UF47 199 aa20.08■□□□□ 0.8
PATJ-201ENST00000307297 ATAD2BQ9ULI0 1458 aa20.07■□□□□ 0.8
PATJ-201ENST00000307297 WIZO95785 1651 aa20.06■□□□□ 0.8
PATJ-201ENST00000307297 HMGXB3Q12766 1538 aa20■□□□□ 0.79
PATJ-201ENST00000307297 NCAPD3P42695 1498 aa20■□□□□ 0.79
PATJ-201ENST00000307297 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
PATJ-201ENST00000307297 TOP2AP11388 1531 aaKnown RBP19.87■□□□□ 0.77
PATJ-201ENST00000307297 SUPT5HO00267 1087 aaKnown RBP19.87■□□□□ 0.77
PATJ-201ENST00000307297 CCDC88BA6NC98 1476 aa19.58■□□□□ 0.72
PATJ-201ENST00000307297 LAMC3Q9Y6N6 1575 aa19.5■□□□□ 0.71
PATJ-201ENST00000307297 CADPSQ9ULU8 1353 aa19.44■□□□□ 0.7
PATJ-201ENST00000307297 PRDM2Q13029 1718 aa19.44■□□□□ 0.7
PATJ-201ENST00000307297 NESP48681 1621 aa19.42■□□□□ 0.7
PATJ-201ENST00000307297 CFTRP13569 1480 aa19.4■□□□□ 0.7
PATJ-201ENST00000307297 PDS5BQ9NTI5 1447 aa19.33■□□□□ 0.69
PATJ-201ENST00000307297 ERCC6Q03468 1493 aa19.31■□□□□ 0.68
PATJ-201ENST00000307297 KIF21AQ7Z4S6 1674 aa19.29■□□□□ 0.68
PATJ-201ENST00000307297 FANCD2Q9BXW9 1451 aa19.26■□□□□ 0.67
PATJ-201ENST00000307297 CEP164Q9UPV0 1460 aa19.23■□□□□ 0.67
PATJ-201ENST00000307297 MRC2Q9UBG0 1479 aa19.11■□□□□ 0.65
PATJ-201ENST00000307297 THOC2Q8NI27 1593 aaKnown RBP19.11■□□□□ 0.65
PATJ-201ENST00000307297 ABCC8Q09428 1581 aa19.04■□□□□ 0.64
PATJ-201ENST00000307297 WDR62O43379 1518 aa19.03■□□□□ 0.64
PATJ-201ENST00000307297 DNMBPQ6XZF7 1577 aa19.02■□□□□ 0.64
PATJ-201ENST00000307297 URB2Q14146 1524 aaKnown RBP19.02■□□□□ 0.64
PATJ-201ENST00000307297 TOPBP1Q92547 1522 aa18.98■□□□□ 0.63
PATJ-201ENST00000307297 WRNQ14191 1432 aaPredicted RBP eCLIP18.98■□□□□ 0.63
PATJ-201ENST00000307297 CUX1P39880 1505 aa18.95■□□□□ 0.62
PATJ-201ENST00000307297 CUX2O14529 1486 aa18.94■□□□□ 0.62
PATJ-201ENST00000307297 BIVM-ERCC5R4GMW8 1640 aa18.93■□□□□ 0.62
PATJ-201ENST00000307297 TOP2BQ02880 1626 aa18.93■□□□□ 0.62
PATJ-201ENST00000307297 SYNJ1O43426 1573 aa18.92■□□□□ 0.62
PATJ-201ENST00000307297 FGD5Q6ZNL6 1462 aa18.85■□□□□ 0.61
PATJ-201ENST00000307297 POLA1P09884 1462 aaPredicted RBP18.84■□□□□ 0.61
PATJ-201ENST00000307297 IFT140Q96RY7 1462 aa18.8■□□□□ 0.6
PATJ-201ENST00000307297 TRIM41Q8WV44 630 aa18.76■□□□□ 0.59
PATJ-201ENST00000307297 SOGA1O94964 1423 aa18.76■□□□□ 0.59
PATJ-201ENST00000307297 TARBP1Q13395 1621 aaKnown RBP18.75■□□□□ 0.59
PATJ-201ENST00000307297 RAD54L2Q9Y4B4 1467 aa18.73■□□□□ 0.59
PATJ-201ENST00000307297 WDR97A6NE52 1622 aa18.72■□□□□ 0.59
PATJ-201ENST00000307297 ABCA10Q8WWZ4 1543 aa18.68■□□□□ 0.58
PATJ-201ENST00000307297 EIF4G3O43432 1585 aaKnown RBP18.66■□□□□ 0.58
PATJ-201ENST00000307297 ZNF608Q9ULD9 1512 aaPredicted RBP18.63■□□□□ 0.57
PATJ-201ENST00000307297 ABCA5Q8WWZ7 1642 aa18.6■□□□□ 0.57
PATJ-201ENST00000307297 TDRD9Q8NDG6 1382 aaKnown RBP18.59■□□□□ 0.57
PATJ-201ENST00000307297 PBRM1Q86U86 1689 aa18.59■□□□□ 0.57
PATJ-201ENST00000307297 AQRO60306 1485 aaKnown RBP eCLIP18.57■□□□□ 0.56
PATJ-201ENST00000307297 GAPVD1Q14C86 1478 aa18.57■□□□□ 0.56
PATJ-201ENST00000307297 KIF27Q86VH2 1401 aa18.56■□□□□ 0.56
PATJ-201ENST00000307297 GRIN2BQ13224 1484 aa18.52■□□□□ 0.56
PATJ-201ENST00000307297 ERICH3Q5RHP9 1530 aa18.5■□□□□ 0.55
PATJ-201ENST00000307297 EEA1Q15075 1411 aa18.46■□□□□ 0.54
PATJ-201ENST00000307297 SNAPC4Q5SXM2 1469 aa18.45■□□□□ 0.54
PATJ-201ENST00000307297 MAGI1Q96QZ7 1491 aaPredicted RBP18.45■□□□□ 0.54
PATJ-201ENST00000307297 CUL7Q14999 1698 aa18.44■□□□□ 0.54
PATJ-201ENST00000307297 PHF23Q9BUL5 403 aaPredicted RBP18.44■□□□□ 0.54
PATJ-201ENST00000307297 RUSC2Q8N2Y8 1516 aa18.43■□□□□ 0.54
PATJ-201ENST00000307297 ADAMTS12P58397 1594 aa18.41■□□□□ 0.54
PATJ-201ENST00000307297 CHD1O14646 1710 aa18.38■□□□□ 0.53
PATJ-201ENST00000307297 SYNJ2O15056 1496 aa18.37■□□□□ 0.53
PATJ-201ENST00000307297 IGF1RP08069 1367 aa18.37■□□□□ 0.53
PATJ-201ENST00000307297 FHAD1B1AJZ9 1412 aa18.36■□□□□ 0.53
PATJ-201ENST00000307297 FAM9AQ8IZU1 332 aaPredicted RBP18.35■□□□□ 0.53
PATJ-201ENST00000307297 FBLN2P98095 1184 aa18.33■□□□□ 0.52
PATJ-201ENST00000307297 CHMP7Q8WUX9 453 aaPredicted RBP18.33■□□□□ 0.52
PATJ-201ENST00000307297 CSRNP3Q8WYN3 585 aa18.32■□□□□ 0.52
PATJ-201ENST00000307297 CARMIL1Q5VZK9 1371 aa18.32■□□□□ 0.52
PATJ-201ENST00000307297 GRIN2AQ12879 1464 aa18.28■□□□□ 0.52
PATJ-201ENST00000307297 RAPGEF2Q9Y4G8 1499 aa18.28■□□□□ 0.52
PATJ-201ENST00000307297 SENP3Q9H4L4 574 aaPredicted RBP18.26■□□□□ 0.51
PATJ-201ENST00000307297 KIF21BO75037 1637 aa18.25■□□□□ 0.51
PATJ-201ENST00000307297 PRXQ9BXM0 1461 aa18.25■□□□□ 0.51
PATJ-201ENST00000307297 OSCARQ8IYS5 282 aa18.18■□□□□ 0.5
PATJ-201ENST00000307297 CEP170Q5SW79 1584 aa18.18■□□□□ 0.5
PATJ-201ENST00000307297 CTTNBP2Q8WZ74 1663 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms