RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 NISCHQ9Y2I1 1504 aa39■■■■□ 3.83
SRGAP2C-201ENST00000304465 CCDC180Q9P1Z9 1646 aa34.78■■■■□ 3.16
SRGAP2C-201ENST00000304465 ABCC9O60706 1549 aa34.44■■■■□ 3.1
SRGAP2C-201ENST00000304465 RB1CC1Q8TDY2 1594 aa32.97■■■□□ 2.87
SRGAP2C-201ENST00000304465 DCAF8L2P0C7V8 631 aa32.91■■■□□ 2.86
SRGAP2C-201ENST00000304465 NACADO15069 1562 aa32.83■■■□□ 2.85
SRGAP2C-201ENST00000304465 MYO15BQ96JP2 1530 aa32.49■■■□□ 2.79
SRGAP2C-201ENST00000304465 ZCCHC6Q5VYS8 1495 aaKnown RBP32.41■■■□□ 2.78
SRGAP2C-201ENST00000304465 DCAF1Q9Y4B6 1507 aa32.23■■■□□ 2.75
SRGAP2C-201ENST00000304465 PABPN1Q86U42 306 aaKnown RBP eCLIP32.16■■■□□ 2.74
SRGAP2C-201ENST00000304465 UNC13AQ9UPW8 1703 aa32.07■■■□□ 2.72
SRGAP2C-201ENST00000304465 BICRAQ9NZM4 1560 aa31.88■■■□□ 2.69
SRGAP2C-201ENST00000304465 DNAJC5BQ9UF47 199 aa31.85■■■□□ 2.69
SRGAP2C-201ENST00000304465 SCRIBQ14160 1630 aa31.76■■■□□ 2.68
SRGAP2C-201ENST00000304465 SHROOM4Q9ULL8 1493 aa31.59■■■□□ 2.65
SRGAP2C-201ENST00000304465 EIF4G1Q04637 1599 aaKnown RBP31.13■■■□□ 2.57
SRGAP2C-201ENST00000304465 CC2D2AQ9P2K1 1620 aa31.08■■■□□ 2.57
SRGAP2C-201ENST00000304465 CECR2Q9BXF3 1484 aa30.98■■■□□ 2.55
SRGAP2C-201ENST00000304465 SMARCA4P51532 1647 aa30.31■■■□□ 2.44
SRGAP2C-201ENST00000304465 NCAPD3P42695 1498 aa30.29■■■□□ 2.44
SRGAP2C-201ENST00000304465 BAZ1AQ9NRL2 1556 aaPredicted RBP30.28■■■□□ 2.44
SRGAP2C-201ENST00000304465 ATAD2BQ9ULI0 1458 aa30.26■■■□□ 2.43
SRGAP2C-201ENST00000304465 SMARCA2P51531 1590 aa30.23■■■□□ 2.43
SRGAP2C-201ENST00000304465 HMGXB3Q12766 1538 aa30.1■■■□□ 2.41
SRGAP2C-201ENST00000304465 MROH2BQ7Z745 1585 aa30.05■■■□□ 2.4
SRGAP2C-201ENST00000304465 BAZ1BQ9UIG0 1483 aaKnown RBP30.04■■■□□ 2.4
SRGAP2C-201ENST00000304465 PEG3Q9GZU2 1588 aa30■■■□□ 2.39
SRGAP2C-201ENST00000304465 ERCC6Q03468 1493 aa29.77■■■□□ 2.36
SRGAP2C-201ENST00000304465 WIZO95785 1651 aa29.69■■■□□ 2.34
SRGAP2C-201ENST00000304465 NESP48681 1621 aa29.66■■■□□ 2.34
SRGAP2C-201ENST00000304465 RSF1Q96T23 1441 aaPredicted RBP29.61■■■□□ 2.33
SRGAP2C-201ENST00000304465 LAMC3Q9Y6N6 1575 aa29.55■■■□□ 2.32
SRGAP2C-201ENST00000304465 CUX2O14529 1486 aa29.5■■■□□ 2.31
SRGAP2C-201ENST00000304465 CADPSQ9ULU8 1353 aa29.43■■■□□ 2.3
SRGAP2C-201ENST00000304465 PDS5BQ9NTI5 1447 aa29.43■■■□□ 2.3
SRGAP2C-201ENST00000304465 TOP2AP11388 1531 aaKnown RBP29.39■■■□□ 2.29
SRGAP2C-201ENST00000304465 KIF21AQ7Z4S6 1674 aa29.25■■■□□ 2.27
SRGAP2C-201ENST00000304465 THOC2Q8NI27 1593 aaKnown RBP29.24■■■□□ 2.27
SRGAP2C-201ENST00000304465 CFTRP13569 1480 aa29.16■■■□□ 2.26
SRGAP2C-201ENST00000304465 MRC2Q9UBG0 1479 aa29.1■■■□□ 2.25
SRGAP2C-201ENST00000304465 CEP164Q9UPV0 1460 aa29.1■■■□□ 2.25
SRGAP2C-201ENST00000304465 FANCD2Q9BXW9 1451 aa29.09■■■□□ 2.25
SRGAP2C-201ENST00000304465 CCDC88BA6NC98 1476 aa29.05■■■□□ 2.24
SRGAP2C-201ENST00000304465 DNAJC5Q9H3Z4 198 aa29.01■■■□□ 2.23
SRGAP2C-201ENST00000304465 WDR62O43379 1518 aa28.97■■■□□ 2.23
SRGAP2C-201ENST00000304465 PRDM2Q13029 1718 aa28.82■■■□□ 2.2
SRGAP2C-201ENST00000304465 URB2Q14146 1524 aaKnown RBP28.77■■■□□ 2.2
SRGAP2C-201ENST00000304465 SUPT5HO00267 1087 aaKnown RBP28.74■■■□□ 2.19
SRGAP2C-201ENST00000304465 ABCC8Q09428 1581 aa28.59■■■□□ 2.17
SRGAP2C-201ENST00000304465 TOPBP1Q92547 1522 aa28.57■■■□□ 2.16
SRGAP2C-201ENST00000304465 DNMBPQ6XZF7 1577 aa28.49■■■□□ 2.15
SRGAP2C-201ENST00000304465 IFT140Q96RY7 1462 aa28.49■■■□□ 2.15
SRGAP2C-201ENST00000304465 ZNF608Q9ULD9 1512 aaPredicted RBP28.36■■■□□ 2.13
SRGAP2C-201ENST00000304465 OSCARQ8IYS5 282 aa28.3■■■□□ 2.12
SRGAP2C-201ENST00000304465 POLA1P09884 1462 aaPredicted RBP28.3■■■□□ 2.12
SRGAP2C-201ENST00000304465 SOGA1O94964 1423 aa28.23■■■□□ 2.11
SRGAP2C-201ENST00000304465 EIF4G3O43432 1585 aaKnown RBP28.22■■■□□ 2.11
SRGAP2C-201ENST00000304465 TARBP1Q13395 1621 aaKnown RBP28.22■■■□□ 2.11
SRGAP2C-201ENST00000304465 CUX1P39880 1505 aa28.2■■■□□ 2.1
SRGAP2C-201ENST00000304465 FGD5Q6ZNL6 1462 aa28.19■■■□□ 2.1
SRGAP2C-201ENST00000304465 AQRO60306 1485 aaKnown RBP eCLIP28.18■■■□□ 2.1
SRGAP2C-201ENST00000304465 RAD54L2Q9Y4B4 1467 aa28.18■■■□□ 2.1
SRGAP2C-201ENST00000304465 TDRD9Q8NDG6 1382 aaKnown RBP28.11■■■□□ 2.09
SRGAP2C-201ENST00000304465 FBLN2P98095 1184 aa28.03■■■□□ 2.08
SRGAP2C-201ENST00000304465 WDR97A6NE52 1622 aa28.02■■■□□ 2.08
SRGAP2C-201ENST00000304465 TRIM41Q8WV44 630 aa27.99■■■□□ 2.07
SRGAP2C-201ENST00000304465 WRNQ14191 1432 aaPredicted RBP eCLIP27.97■■■□□ 2.07
SRGAP2C-201ENST00000304465 GRIN2BQ13224 1484 aa27.93■■■□□ 2.06
SRGAP2C-201ENST00000304465 SNAPC4Q5SXM2 1469 aa27.92■■■□□ 2.06
SRGAP2C-201ENST00000304465 ABCA10Q8WWZ4 1543 aa27.9■■■□□ 2.06
SRGAP2C-201ENST00000304465 CHD1O14646 1710 aa27.89■■■□□ 2.06
SRGAP2C-201ENST00000304465 CHMP7Q8WUX9 453 aaPredicted RBP27.89■■■□□ 2.05
SRGAP2C-201ENST00000304465 GAPVD1Q14C86 1478 aa27.88■■■□□ 2.05
SRGAP2C-201ENST00000304465 TOP2BQ02880 1626 aa27.88■■■□□ 2.05
SRGAP2C-201ENST00000304465 MAGI1Q96QZ7 1491 aaPredicted RBP27.87■■■□□ 2.05
SRGAP2C-201ENST00000304465 BIVM-ERCC5R4GMW8 1640 aa27.85■■■□□ 2.05
SRGAP2C-201ENST00000304465 SYNJ1O43426 1573 aa27.84■■■□□ 2.05
SRGAP2C-201ENST00000304465 SYNJ2O15056 1496 aa27.77■■■□□ 2.04
SRGAP2C-201ENST00000304465 RIMBP3CA6NJZ7 1639 aa27.77■■■□□ 2.04
SRGAP2C-201ENST00000304465 RIMBP3BA6NNM3 1639 aa27.77■■■□□ 2.04
SRGAP2C-201ENST00000304465 ABCA5Q8WWZ7 1642 aa27.77■■■□□ 2.04
SRGAP2C-201ENST00000304465 RIMBP3Q9UFD9 1639 aa27.77■■■□□ 2.04
SRGAP2C-201ENST00000304465 PBRM1Q86U86 1689 aa27.76■■■□□ 2.03
SRGAP2C-201ENST00000304465 ARHGEF11O15085 1522 aa27.76■■■□□ 2.03
SRGAP2C-201ENST00000304465 CYB5RLQ6IPT4 315 aa27.61■■■□□ 2.01
SRGAP2C-201ENST00000304465 CLASP1Q7Z460 1538 aa27.6■■■□□ 2.01
SRGAP2C-201ENST00000304465 ERICH3Q5RHP9 1530 aa27.56■■■□□ 2
SRGAP2C-201ENST00000304465 FHAD1B1AJZ9 1412 aa27.55■■■□□ 2
SRGAP2C-201ENST00000304465 ADAMTS12P58397 1594 aa27.54■■■□□ 2
SRGAP2C-201ENST00000304465 GRIN2AQ12879 1464 aa27.54■■■□□ 2
SRGAP2C-201ENST00000304465 ARAP1Q96P48 1450 aa27.5■■□□□ 1.99
SRGAP2C-201ENST00000304465 KIF27Q86VH2 1401 aa27.43■■□□□ 1.98
SRGAP2C-201ENST00000304465 NUP160Q12769 1436 aa27.41■■□□□ 1.98
SRGAP2C-201ENST00000304465 CEP170Q5SW79 1584 aa27.38■■□□□ 1.97
SRGAP2C-201ENST00000304465 IGF1RP08069 1367 aa27.32■■□□□ 1.96
SRGAP2C-201ENST00000304465 CUL7Q14999 1698 aa27.24■■□□□ 1.95
SRGAP2C-201ENST00000304465 TRHP20396 242 aaPredicted RBP27.22■■□□□ 1.95
SRGAP2C-201ENST00000304465 JPH4Q96JJ6 628 aa27.21■■□□□ 1.95
SRGAP2C-201ENST00000304465 SHROOM2Q13796 1616 aa27.2■■□□□ 1.94
SRGAP2C-201ENST00000304465 ERCC6L2Q5T890 1561 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms