RNA–Protein interactions for RNA: ENST00000304046.6

ORMDL3-201, Transcript of ORMDL sphingolipid biosynthesis regulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ORMDL3, Length 2,111 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ORMDL3-201ENST00000304046 UPF1Q92900 1129 aaKnown RBP eCLIP19.12■□□□□ 0.652e-32■■■■■ 131.1
ORMDL3-201ENST00000304046 AKAP1Q92667 903 aaKnown RBP eCLIP15.04■□□□□ -03e-36■■■■■ 123
ORMDL3-201ENST00000304046 DDX3XO00571 662 aaKnown RBP eCLIP17.8■□□□□ 0.442e-9■■■■■ 42.4
ORMDL3-201ENST00000304046 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.24■□□□□ 0.358e-11■■■■■ 40
ORMDL3-201ENST00000304046 SF3B1O75533 1304 aaKnown RBP eCLIP17.14■□□□□ 0.338e-7■■■■■ 30.6
ORMDL3-201ENST00000304046 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.72■□□□□ 0.119e-10■■■■□ 24.5
ORMDL3-201ENST00000304046 LARP4Q71RC2 724 aaKnown RBP eCLIP16.38■□□□□ 0.212e-12■■■■□ 24
ORMDL3-201ENST00000304046 AQRO60306 1485 aaKnown RBP eCLIP25.78■■□□□ 1.721e-6■■■■□ 22.5
ORMDL3-201ENST00000304046 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.54■□□□□ 0.562e-14■■■■□ 19.3
ORMDL3-201ENST00000304046 EFTUD2Q15029 972 aaKnown RBP eCLIP17.04■□□□□ 0.322e-9■■■□□ 18.6
ORMDL3-201ENST00000304046 DDX6P26196 483 aaKnown RBP eCLIP16.61■□□□□ 0.252e-8■■■□□ 17.5
ORMDL3-201ENST00000304046 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.03□□□□□ -0.322e-6■■■□□ 16.7
ORMDL3-201ENST00000304046 GTF2F1P35269 517 aaKnown RBP eCLIP19.08■□□□□ 0.642e-8■■■□□ 16.4
ORMDL3-201ENST00000304046 PRPF4O43172 522 aaKnown RBP eCLIP17.22■□□□□ 0.352e-8■■■□□ 15.8
ORMDL3-201ENST00000304046 FUBP3Q96I24 572 aaKnown RBP eCLIP17.08■□□□□ 0.327e-6■■■□□ 15.7
ORMDL3-201ENST00000304046 NKRFO15226 690 aaKnown RBP eCLIP18.2■□□□□ 0.53e-19■■■□□ 15.2
ORMDL3-201ENST00000304046 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.2■□□□□ 0.343e-20■■□□□ 14.5
ORMDL3-201ENST00000304046 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.17■□□□□ 0.343e-8■■□□□ 14.4
ORMDL3-201ENST00000304046 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.52■■□□□ 1.525e-7■■□□□ 13.3
ORMDL3-201ENST00000304046 RBM15Q96T37 977 aaKnown RBP eCLIP17.29■□□□□ 0.362e-6■■□□□ 12.8
ORMDL3-201ENST00000304046 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.11■□□□□ 0.011e-7■■□□□ 12.6
ORMDL3-201ENST00000304046 PCBP2Q15366 365 aaKnown RBP eCLIP16.18■□□□□ 0.187e-7■■□□□ 12.5
ORMDL3-201ENST00000304046 GRSF1Q12849 480 aaKnown RBP eCLIP16.13■□□□□ 0.172e-10■■□□□ 11.4
ORMDL3-201ENST00000304046 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.87■□□□□ 0.292e-7■□□□□ 11
ORMDL3-201ENST00000304046 RPS3P23396 243 aaKnown RBP eCLIP16.27■□□□□ 0.27e-9■□□□□ 11
ORMDL3-201ENST00000304046 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.81■□□□□ 0.442e-8■□□□□ 10.3
ORMDL3-201ENST00000304046 TIA1P31483 386 aaKnown RBP eCLIP15.79■□□□□ 0.122e-8■□□□□ 10.1
ORMDL3-201ENST00000304046 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.61■□□□□ 0.092e-9■□□□□ 9.1
ORMDL3-201ENST00000304046 PPIGQ13427 754 aaKnown RBP eCLIP16.93■□□□□ 0.32e-7■□□□□ 8.4
ORMDL3-201ENST00000304046 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.1■□□□□ 0.495e-7■□□□□ 8.1
Retrieved 30 of 30 RNA–protein pairs in 11.9 ms