RNA–Protein interactions for RNA: ENST00000303694.5

CHST11-201, Transcript of carbohydrate sulfotransferase 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHST11, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST11-201ENST00000303694 SF3B1O75533 1304 aaKnown RBP eCLIP18.36■□□□□ 0.532e-6■■■■■ 171.5
CHST11-201ENST00000303694 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.55■□□□□ 0.729e-7■■■■■ 113.4
CHST11-201ENST00000303694 AGGF1Q8N302 714 aaeCLIP18.93■□□□□ 0.627e-8■■■■■ 102.9
CHST11-201ENST00000303694 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.76■□□□□ 0.594e-10■■■■■ 87
CHST11-201ENST00000303694 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.52■■□□□ 1.042e-6■■■■■ 83.7
CHST11-201ENST00000303694 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.13■□□□□ 0.659e-7■■■■■ 59.5
CHST11-201ENST00000303694 AARSP49588 968 aaKnown RBP eCLIP19.14■□□□□ 0.652e-6■■■■■ 48.9
CHST11-201ENST00000303694 WRNQ14191 1432 aaPredicted RBP eCLIP23.46■■□□□ 1.358e-6■■■■■ 43.2
CHST11-201ENST00000303694 EIF4G2P78344 907 aaKnown RBP eCLIP23.96■■□□□ 1.436e-7■■■■■ 35.4
CHST11-201ENST00000303694 LSM11P83369 360 aaKnown RBP eCLIP15.92■□□□□ 0.141e-8■■■■■ 35.1
CHST11-201ENST00000303694 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.04■□□□□ 0.325e-7■■■■■ 34.6
CHST11-201ENST00000303694 FMR1Q06787 632 aaKnown RBP eCLIP18.89■□□□□ 0.622e-7■■■■■ 32.6
CHST11-201ENST00000303694 ZRANB2O95218 330 aaKnown RBP eCLIP19.36■□□□□ 0.694e-7■■■■■ 32.1
CHST11-201ENST00000303694 GTF2F1P35269 517 aaKnown RBP eCLIP20.52■□□□□ 0.871e-6■■■■■ 32.1
CHST11-201ENST00000303694 TARDBPQ13148 414 aaKnown RBP eCLIP17.7■□□□□ 0.425e-7■■■■■ 32
CHST11-201ENST00000303694 HNRNPLP14866 589 aaKnown RBP eCLIP18.05■□□□□ 0.489e-7■■■■■ 31.9
CHST11-201ENST00000303694 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.81■□□□□ 0.443e-9■■■■■ 30.5
CHST11-201ENST00000303694 PTBP1P26599 531 aaKnown RBP eCLIP16.64■□□□□ 0.254e-7■■■■■ 29.6
CHST11-201ENST00000303694 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.4■□□□□ 0.383e-6■■■■■ 27.7
CHST11-201ENST00000303694 DDX3XO00571 662 aaKnown RBP eCLIP18.38■□□□□ 0.532e-7■■■■□ 24.5
CHST11-201ENST00000303694 YBX3P16989 372 aaKnown RBP eCLIP18.41■□□□□ 0.546e-7■■■■□ 22.3
CHST11-201ENST00000303694 TIA1P31483 386 aaKnown RBP eCLIP17.37■□□□□ 0.371e-7■■■■□ 21.7
CHST11-201ENST00000303694 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.89■□□□□ 0.613e-7■■■□□ 16.2
CHST11-201ENST00000303694 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.27■□□□□ 0.522e-6■■■□□ 15.9
CHST11-201ENST00000303694 RBM15Q96T37 977 aaKnown RBP eCLIP18.97■□□□□ 0.632e-6■■■□□ 15.6
CHST11-201ENST00000303694 HNRNPMP52272 730 aaKnown RBP eCLIP22.44■■□□□ 1.181e-6■■■□□ 15.4
CHST11-201ENST00000303694 NONOQ15233 471 aaKnown RBP eCLIP20.16■□□□□ 0.828e-7■■■□□ 15.4
CHST11-201ENST00000303694 ZNF622Q969S3 477 aaKnown RBP eCLIP20.6■□□□□ 0.894e-7■■■□□ 15.4
CHST11-201ENST00000303694 SND1Q7KZF4 910 aaKnown RBP eCLIP19.91■□□□□ 0.783e-8■■■□□ 15.3
CHST11-201ENST00000303694 EWSR1Q01844 656 aaKnown RBP eCLIP15.8■□□□□ 0.121e-6■■□□□ 14.1
CHST11-201ENST00000303694 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.3■□□□□ 0.363e-6■■□□□ 12.9
CHST11-201ENST00000303694 KHSRPQ92945 711 aaKnown RBP eCLIP16.85■□□□□ 0.293e-7■■□□□ 12.8
CHST11-201ENST00000303694 MATR3P43243 847 aaKnown RBP eCLIP21.04■□□□□ 0.962e-6■■□□□ 12.7
CHST11-201ENST00000303694 AATFQ9NY61 560 aaKnown RBP eCLIP20.06■□□□□ 0.82e-6■■□□□ 12.4
CHST11-201ENST00000303694 METAP2P50579 478 aaKnown RBP eCLIP20.78■□□□□ 0.923e-6■■□□□ 12.3
CHST11-201ENST00000303694 UPF1Q92900 1129 aaKnown RBP eCLIP17.95■□□□□ 0.468e-6■□□□□ 10.5
CHST11-201ENST00000303694 RBFOX2O43251 390 aaKnown RBP eCLIP15.42■□□□□ 0.064e-9■□□□□ 10.4
Retrieved 37 of 37 RNA–protein pairs in 11.1 ms