RNA–Protein interactions for RNA: ENST00000297788.8

CCDC136-201, Transcript of coiled-coil domain containing 136, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC136, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136-201ENST00000297788 NISCHQ9Y2I1 1504 aa19.7■□□□□ 0.74
CCDC136-201ENST00000297788 CCDC180Q9P1Z9 1646 aa17.31■□□□□ 0.36
CCDC136-201ENST00000297788 DCAF8L2P0C7V8 631 aa16.83■□□□□ 0.28
CCDC136-201ENST00000297788 ABCC9O60706 1549 aa16.58■□□□□ 0.24
CCDC136-201ENST00000297788 ZCCHC6Q5VYS8 1495 aaKnown RBP16.47■□□□□ 0.23
CCDC136-201ENST00000297788 SUPT5HO00267 1087 aaKnown RBP16.45■□□□□ 0.22
CCDC136-201ENST00000297788 MYT1Q01538 1121 aa16.4■□□□□ 0.22
CCDC136-201ENST00000297788 SHROOM4Q9ULL8 1493 aa16.4■□□□□ 0.22
CCDC136-201ENST00000297788 PELP1Q8IZL8 1130 aaKnown RBP16.37■□□□□ 0.21
CCDC136-201ENST00000297788 DCAF1Q9Y4B6 1507 aa16.34■□□□□ 0.21
CCDC136-201ENST00000297788 MYO15BQ96JP2 1530 aa16.27■□□□□ 0.19
CCDC136-201ENST00000297788 NACADO15069 1562 aa16.25■□□□□ 0.19
CCDC136-201ENST00000297788 RB1CC1Q8TDY2 1594 aa16.18■□□□□ 0.18
CCDC136-201ENST00000297788 SLC24A1O60721 1099 aa16.04■□□□□ 0.16
CCDC136-201ENST00000297788 SCRIBQ14160 1630 aa15.82■□□□□ 0.12
CCDC136-201ENST00000297788 TTBK1Q5TCY1 1321 aaPredicted RBP15.71■□□□□ 0.11
CCDC136-201ENST00000297788 EHMT2Q96KQ7 1210 aa15.65■□□□□ 0.1
CCDC136-201ENST00000297788 PABPN1Q86U42 306 aaKnown RBP eCLIP15.6■□□□□ 0.09
CCDC136-201ENST00000297788 ERICH6Q7L0X2 663 aa15.55■□□□□ 0.08
CCDC136-201ENST00000297788 UNC13AQ9UPW8 1703 aa15.55■□□□□ 0.08
CCDC136-201ENST00000297788 BICRAQ9NZM4 1560 aa15.48■□□□□ 0.07
CCDC136-201ENST00000297788 PCGF6Q9BYE7 350 aa15.47■□□□□ 0.07
CCDC136-201ENST00000297788 FAM9AQ8IZU1 332 aaPredicted RBP15.42■□□□□ 0.06
CCDC136-201ENST00000297788 PRKCSHP14314 528 aaPredicted RBP15.39■□□□□ 0.05
CCDC136-201ENST00000297788 BAZ1AQ9NRL2 1556 aaPredicted RBP15.3■□□□□ 0.04
CCDC136-201ENST00000297788 CECR2Q9BXF3 1484 aa15.24■□□□□ 0.03
CCDC136-201ENST00000297788 RSF1Q96T23 1441 aaPredicted RBP15.18■□□□□ 0.02
CCDC136-201ENST00000297788 TRIM41Q8WV44 630 aa15.17■□□□□ 0.02
CCDC136-201ENST00000297788 SMARCA4P51532 1647 aa15.17■□□□□ 0.02
CCDC136-201ENST00000297788 CHIC1Q5VXU3 224 aa15.17■□□□□ 0.02
CCDC136-201ENST00000297788 MROH2BQ7Z745 1585 aa15.14■□□□□ 0.01
CCDC136-201ENST00000297788 EIF4G1Q04637 1599 aaKnown RBP15.13■□□□□ 0.01
CCDC136-201ENST00000297788 SMARCA2P51531 1590 aa15.09■□□□□ 0.01
CCDC136-201ENST00000297788 LOC105371045A0A1W2PR82 267 aa15.06■□□□□ 0
CCDC136-201ENST00000297788 ATAD2BQ9ULI0 1458 aa15.02■□□□□ -0
CCDC136-201ENST00000297788 BAZ1BQ9UIG0 1483 aaKnown RBP14.99□□□□□ -0.01
CCDC136-201ENST00000297788 PEG3Q9GZU2 1588 aa14.99□□□□□ -0.01
CCDC136-201ENST00000297788 NCAPD3P42695 1498 aa14.98□□□□□ -0.01
CCDC136-201ENST00000297788 WIZO95785 1651 aa14.97□□□□□ -0.01
CCDC136-201ENST00000297788 CC2D2AQ9P2K1 1620 aa14.95□□□□□ -0.02
CCDC136-201ENST00000297788 HRCP23327 699 aa14.95□□□□□ -0.02
CCDC136-201ENST00000297788 PPARGC1BQ86YN6 1023 aaKnown RBP14.92□□□□□ -0.02
CCDC136-201ENST00000297788 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
CCDC136-201ENST00000297788 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
CCDC136-201ENST00000297788 DAXXQ9UER7 740 aaPredicted RBP14.91□□□□□ -0.02
CCDC136-201ENST00000297788 APLP2Q06481 763 aa14.88□□□□□ -0.03
CCDC136-201ENST00000297788 RANGAP1P46060 587 aaPredicted RBP14.85□□□□□ -0.03
CCDC136-201ENST00000297788 TRIM26Q12899 539 aaPredicted RBP14.84□□□□□ -0.03
CCDC136-201ENST00000297788 ZEB1P37275 1124 aaPredicted RBP14.83□□□□□ -0.04
CCDC136-201ENST00000297788 CCER1Q8TC90 406 aaPredicted RBP14.83□□□□□ -0.04
CCDC136-201ENST00000297788 UBTFP17480 764 aaKnown RBP14.78□□□□□ -0.04
CCDC136-201ENST00000297788 CCDC88BA6NC98 1476 aa14.74□□□□□ -0.05
CCDC136-201ENST00000297788 BCL11AQ9H165 835 aa14.74□□□□□ -0.05
CCDC136-201ENST00000297788 DNAJC5BQ9UF47 199 aa14.72□□□□□ -0.05
CCDC136-201ENST00000297788 EIF5BO60841 1220 aaKnown RBP14.69□□□□□ -0.06
CCDC136-201ENST00000297788 CADPSQ9ULU8 1353 aa14.61□□□□□ -0.07
CCDC136-201ENST00000297788 CFTRP13569 1480 aa14.55□□□□□ -0.08
CCDC136-201ENST00000297788 CENPBP07199 599 aaPredicted RBP14.53□□□□□ -0.08
CCDC136-201ENST00000297788 PDS5BQ9NTI5 1447 aa14.51□□□□□ -0.09
CCDC136-201ENST00000297788 LAMC3Q9Y6N6 1575 aa14.51□□□□□ -0.09
CCDC136-201ENST00000297788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.47□□□□□ -0.09
CCDC136-201ENST00000297788 ATP1B4Q9UN42 357 aaPredicted RBP14.47□□□□□ -0.09
CCDC136-201ENST00000297788 YTHDC1Q96MU7 727 aaKnown RBP14.46□□□□□ -0.1
CCDC136-201ENST00000297788 FANCD2Q9BXW9 1451 aa14.41□□□□□ -0.1
CCDC136-201ENST00000297788 HNRNPUL2Q1KMD3 747 aaKnown RBP14.4□□□□□ -0.1
CCDC136-201ENST00000297788 NESP48681 1621 aa14.39□□□□□ -0.11
CCDC136-201ENST00000297788 CEP164Q9UPV0 1460 aa14.39□□□□□ -0.11
CCDC136-201ENST00000297788 WRNQ14191 1432 aaPredicted RBP eCLIP14.38□□□□□ -0.11
CCDC136-201ENST00000297788 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
CCDC136-201ENST00000297788 PRDM2Q13029 1718 aa14.37□□□□□ -0.11
CCDC136-201ENST00000297788 ABCC8Q09428 1581 aa14.36□□□□□ -0.11
CCDC136-201ENST00000297788 ITGAEP38570 1179 aa14.3□□□□□ -0.12
CCDC136-201ENST00000297788 MRC2Q9UBG0 1479 aa14.25□□□□□ -0.13
CCDC136-201ENST00000297788 DNMBPQ6XZF7 1577 aa14.22□□□□□ -0.13
CCDC136-201ENST00000297788 DIEXFQ68CQ4 756 aaKnown RBP14.21□□□□□ -0.13
CCDC136-201ENST00000297788 TOP2BQ02880 1626 aa14.21□□□□□ -0.14
CCDC136-201ENST00000297788 TOPBP1Q92547 1522 aa14.19□□□□□ -0.14
CCDC136-201ENST00000297788 KIF21AQ7Z4S6 1674 aa14.19□□□□□ -0.14
CCDC136-201ENST00000297788 CUX1P39880 1505 aa14.19□□□□□ -0.14
CCDC136-201ENST00000297788 BIVM-ERCC5R4GMW8 1640 aa14.17□□□□□ -0.14
CCDC136-201ENST00000297788 SYNJ1O43426 1573 aa14.17□□□□□ -0.14
CCDC136-201ENST00000297788 EEA1Q15075 1411 aa14.16□□□□□ -0.14
CCDC136-201ENST00000297788 PLEKHG5O94827 1062 aa14.15□□□□□ -0.14
CCDC136-201ENST00000297788 URB2Q14146 1524 aaKnown RBP14.15□□□□□ -0.14
CCDC136-201ENST00000297788 SOGA1O94964 1423 aa14.13□□□□□ -0.15
CCDC136-201ENST00000297788 FGD5Q6ZNL6 1462 aa14.13□□□□□ -0.15
CCDC136-201ENST00000297788 CSRNP3Q8WYN3 585 aa14.12□□□□□ -0.15
CCDC136-201ENST00000297788 WDR62O43379 1518 aa14.11□□□□□ -0.15
CCDC136-201ENST00000297788 KIF27Q86VH2 1401 aa14.11□□□□□ -0.15
CCDC136-201ENST00000297788 POLA1P09884 1462 aaPredicted RBP14.09□□□□□ -0.15
CCDC136-201ENST00000297788 IFT140Q96RY7 1462 aa14.07□□□□□ -0.16
CCDC136-201ENST00000297788 PODXL2Q9NZ53 605 aa14.06□□□□□ -0.16
CCDC136-201ENST00000297788 CUX2O14529 1486 aa14.05□□□□□ -0.16
CCDC136-201ENST00000297788 THOC2Q8NI27 1593 aaKnown RBP14.04□□□□□ -0.16
CCDC136-201ENST00000297788 PLPPR3Q6T4P5 718 aa14.03□□□□□ -0.16
CCDC136-201ENST00000297788 ABCA10Q8WWZ4 1543 aa14.03□□□□□ -0.16
CCDC136-201ENST00000297788 RAD54L2Q9Y4B4 1467 aa14.01□□□□□ -0.17
CCDC136-201ENST00000297788 SCAF1Q9H7N4 1312 aaKnown RBP14□□□□□ -0.17
CCDC136-201ENST00000297788 NCBP3Q53F19 620 aaKnown RBP13.98□□□□□ -0.17
CCDC136-201ENST00000297788 NEFLP07196 543 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms