RNA–Protein interactions for RNA: ENST00000297540.4

PHAX-201, Transcript of phosphorylated adaptor for RNA export, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHAX, Length 4,288 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHAX-201ENST00000297540 NISCHQ9Y2I1 1504 aa25.12■■□□□ 1.61
PHAX-201ENST00000297540 SUPT5HO00267 1087 aaKnown RBP24.77■■□□□ 1.56
PHAX-201ENST00000297540 DCAF8L2P0C7V8 631 aa24.53■■□□□ 1.52
PHAX-201ENST00000297540 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
PHAX-201ENST00000297540 PCGF6Q9BYE7 350 aa24.19■■□□□ 1.46
PHAX-201ENST00000297540 HRCP23327 699 aa23.7■■□□□ 1.38
PHAX-201ENST00000297540 EHMT2Q96KQ7 1210 aa23.7■■□□□ 1.38
PHAX-201ENST00000297540 PELP1Q8IZL8 1130 aaKnown RBP23.67■■□□□ 1.38
PHAX-201ENST00000297540 PPARGC1BQ86YN6 1023 aaKnown RBP23.47■■□□□ 1.35
PHAX-201ENST00000297540 FAM9AQ8IZU1 332 aaPredicted RBP23.25■■□□□ 1.31
PHAX-201ENST00000297540 ZEB1P37275 1124 aaPredicted RBP23.18■■□□□ 1.3
PHAX-201ENST00000297540 CENPBP07199 599 aaPredicted RBP23.12■■□□□ 1.29
PHAX-201ENST00000297540 TTBK1Q5TCY1 1321 aaPredicted RBP23.04■■□□□ 1.28
PHAX-201ENST00000297540 MYT1Q01538 1121 aa23■■□□□ 1.27
PHAX-201ENST00000297540 TRIM26Q12899 539 aaPredicted RBP22.95■■□□□ 1.26
PHAX-201ENST00000297540 CHIC1Q5VXU3 224 aa22.94■■□□□ 1.26
PHAX-201ENST00000297540 CCER1Q8TC90 406 aaPredicted RBP22.94■■□□□ 1.26
PHAX-201ENST00000297540 LOC105371045A0A1W2PR82 267 aa22.93■■□□□ 1.26
PHAX-201ENST00000297540 YTHDC1Q96MU7 727 aaKnown RBP22.83■■□□□ 1.24
PHAX-201ENST00000297540 TRIM41Q8WV44 630 aa22.71■■□□□ 1.23
PHAX-201ENST00000297540 GTF3C3Q9Y5Q9 886 aa22.39■■□□□ 1.18
PHAX-201ENST00000297540 APLP2Q06481 763 aa22.39■■□□□ 1.17
PHAX-201ENST00000297540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.34■■□□□ 1.17
PHAX-201ENST00000297540 DIEXFQ68CQ4 756 aaKnown RBP22.3■■□□□ 1.16
PHAX-201ENST00000297540 SCAF1Q9H7N4 1312 aaKnown RBP22.22■■□□□ 1.15
PHAX-201ENST00000297540 ERICH6Q7L0X2 663 aa22.21■■□□□ 1.15
PHAX-201ENST00000297540 RANGAP1P46060 587 aaPredicted RBP22.19■■□□□ 1.14
PHAX-201ENST00000297540 ACIN1Q9UKV3 1341 aaKnown RBP22.18■■□□□ 1.14
PHAX-201ENST00000297540 UBTFP17480 764 aaKnown RBP22.09■■□□□ 1.13
PHAX-201ENST00000297540 NEFLP07196 543 aa21.99■■□□□ 1.11
PHAX-201ENST00000297540 NEUROD1Q13562 356 aa21.97■■□□□ 1.11
PHAX-201ENST00000297540 HNRNPUL2Q1KMD3 747 aaKnown RBP21.92■■□□□ 1.1
PHAX-201ENST00000297540 MYO15BQ96JP2 1530 aa21.91■■□□□ 1.1
PHAX-201ENST00000297540 DCAF1Q9Y4B6 1507 aa21.81■■□□□ 1.08
PHAX-201ENST00000297540 BCANQ96GW7 911 aa21.68■■□□□ 1.06
PHAX-201ENST00000297540 ZNF316A6NFI3 1004 aaPredicted RBP21.67■■□□□ 1.06
PHAX-201ENST00000297540 ITGAEP38570 1179 aa21.57■■□□□ 1.04
PHAX-201ENST00000297540 ATP1B4Q9UN42 357 aaPredicted RBP21.49■■□□□ 1.03
PHAX-201ENST00000297540 MIER1Q8N108 512 aa21.31■■□□□ 1
PHAX-201ENST00000297540 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
PHAX-201ENST00000297540 CNGB1Q14028 1251 aaPredicted RBP21.18■□□□□ 0.98
PHAX-201ENST00000297540 FKBP8Q14318 412 aa21.14■□□□□ 0.97
PHAX-201ENST00000297540 RTL5Q5HYW3 569 aaPredicted RBP21.12■□□□□ 0.97
PHAX-201ENST00000297540 CDK11AQ9UQ88 783 aaPredicted RBP21.06■□□□□ 0.96
PHAX-201ENST00000297540 ZCCHC6Q5VYS8 1495 aaKnown RBP21.04■□□□□ 0.96
PHAX-201ENST00000297540 POLR3GLQ9BT43 218 aa21.02■□□□□ 0.96
PHAX-201ENST00000297540 CLSPNQ9HAW4 1339 aa21.02■□□□□ 0.96
PHAX-201ENST00000297540 ANP32EQ9BTT0 268 aa21.01■□□□□ 0.95
PHAX-201ENST00000297540 ANP32CO43423 234 aa20.96■□□□□ 0.95
PHAX-201ENST00000297540 DAXXQ9UER7 740 aaPredicted RBP20.92■□□□□ 0.94
PHAX-201ENST00000297540 CSRNP3Q8WYN3 585 aa20.9■□□□□ 0.94
PHAX-201ENST00000297540 BCL11AQ9H165 835 aa20.9■□□□□ 0.94
PHAX-201ENST00000297540 FAM50AQ14320 339 aaKnown RBP20.87■□□□□ 0.93
PHAX-201ENST00000297540 TRIM52Q96A61 297 aa20.86■□□□□ 0.93
PHAX-201ENST00000297540 DDX10Q13206 875 aaKnown RBP20.84■□□□□ 0.93
PHAX-201ENST00000297540 SUPT16HQ9Y5B9 1047 aaKnown RBP20.82■□□□□ 0.92
PHAX-201ENST00000297540 NBR1Q14596 966 aa20.73■□□□□ 0.91
PHAX-201ENST00000297540 IRX6P78412 446 aaPredicted RBP20.71■□□□□ 0.91
PHAX-201ENST00000297540 HNRNPUQ00839 825 aaKnown RBP eCLIP20.69■□□□□ 0.9
PHAX-201ENST00000297540 HIRIP3Q9BW71 556 aaPredicted RBP20.64■□□□□ 0.89
PHAX-201ENST00000297540 ANP32AP39687 249 aaKnown RBP20.62■□□□□ 0.89
PHAX-201ENST00000297540 EIF5BO60841 1220 aaKnown RBP20.61■□□□□ 0.89
PHAX-201ENST00000297540 NPM2Q86SE8 214 aaKnown RBP20.61■□□□□ 0.89
PHAX-201ENST00000297540 TSHZ2Q9NRE2 1034 aa20.58■□□□□ 0.88
PHAX-201ENST00000297540 CEP162Q5TB80 1403 aa20.54■□□□□ 0.88
PHAX-201ENST00000297540 MYT1LQ9UL68 1186 aa20.5■□□□□ 0.87
PHAX-201ENST00000297540 RSF1Q96T23 1441 aaPredicted RBP20.5■□□□□ 0.87
PHAX-201ENST00000297540 FAM9BQ8IZU0 186 aa20.47■□□□□ 0.87
PHAX-201ENST00000297540 RBM19Q9Y4C8 960 aaKnown RBP20.47■□□□□ 0.87
PHAX-201ENST00000297540 SCRIBQ14160 1630 aa20.46■□□□□ 0.87
PHAX-201ENST00000297540 ZNF326Q5BKZ1 582 aaKnown RBP20.4■□□□□ 0.86
PHAX-201ENST00000297540 ZBTB47Q9UFB7 747 aaPredicted RBP20.39■□□□□ 0.85
PHAX-201ENST00000297540 P3H3Q8IVL6 736 aa20.38■□□□□ 0.85
PHAX-201ENST00000297540 PABPN1Q86U42 306 aaKnown RBP eCLIP20.36■□□□□ 0.85
PHAX-201ENST00000297540 ABCC9O60706 1549 aa20.35■□□□□ 0.85
PHAX-201ENST00000297540 TONSLQ96HA7 1378 aa20.35■□□□□ 0.85
PHAX-201ENST00000297540 CLIP1P30622 1438 aa20.34■□□□□ 0.85
PHAX-201ENST00000297540 CCDC136Q96JN2 1154 aa20.34■□□□□ 0.85
PHAX-201ENST00000297540 RTN4Q9NQC3 1192 aaKnown RBP20.32■□□□□ 0.84
PHAX-201ENST00000297540 TNIKQ9UKE5 1360 aa20.26■□□□□ 0.83
PHAX-201ENST00000297540 DEKP35659 375 aaKnown RBP20.25■□□□□ 0.83
PHAX-201ENST00000297540 MRS2Q9HD23 443 aa20.24■□□□□ 0.83
PHAX-201ENST00000297540 SENP3-EIF4A1A0A087X0R7 540 aa20.22■□□□□ 0.83
PHAX-201ENST00000297540 SALL2Q9Y467 1007 aaPredicted RBP20.22■□□□□ 0.83
PHAX-201ENST00000297540 KCNH8Q96L42 1107 aa20.19■□□□□ 0.82
PHAX-201ENST00000297540 SIN3AQ96ST3 1273 aa20.18■□□□□ 0.82
PHAX-201ENST00000297540 B4GALNT3Q6L9W6 998 aa20.17■□□□□ 0.82
PHAX-201ENST00000297540 GOLGA3Q08378 1498 aa20.16■□□□□ 0.82
PHAX-201ENST00000297540 NOP58Q9Y2X3 529 aaKnown RBP20.13■□□□□ 0.81
PHAX-201ENST00000297540 RB1CC1Q8TDY2 1594 aa20.13■□□□□ 0.81
PHAX-201ENST00000297540 PPP4R2Q9NY27 417 aa20.1■□□□□ 0.81
PHAX-201ENST00000297540 SOGA1O94964 1423 aa20.08■□□□□ 0.81
PHAX-201ENST00000297540 ARXQ96QS3 562 aa20.08■□□□□ 0.8
PHAX-201ENST00000297540 LAS1LQ9Y4W2 734 aaKnown RBP20.07■□□□□ 0.8
PHAX-201ENST00000297540 EEA1Q15075 1411 aa20.05■□□□□ 0.8
PHAX-201ENST00000297540 ARID3CA6NKF2 412 aa20.05■□□□□ 0.8
PHAX-201ENST00000297540 TMC1Q8TDI8 760 aa20.01■□□□□ 0.79
PHAX-201ENST00000297540 CHIC2Q9UKJ5 165 aa20■□□□□ 0.79
PHAX-201ENST00000297540 NEFMP07197 916 aa19.98■□□□□ 0.79
PHAX-201ENST00000297540 SLC4A1APQ9BWU0 796 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms