RNA–Protein interactions for RNA: ENST00000294599.8

MEGF6-201, Transcript of multiple EGF like domains 6, humanhuman

TSL 1 (best) BASIC

Gene MEGF6, Length 4,501 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEGF6-201ENST00000294599 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.8■□□□□ 0.64e-14■■■■■ 447.2
MEGF6-201ENST00000294599 EWSR1Q01844 656 aaKnown RBP eCLIP14.27□□□□□ -0.134e-18■■■■■ 97
MEGF6-201ENST00000294599 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.53■□□□□ 0.49e-10■■■■■ 79.8
MEGF6-201ENST00000294599 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.2■□□□□ 0.343e-9■■■■■ 78.5
MEGF6-201ENST00000294599 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.19■□□□□ 0.182e-6■■■■■ 50.2
MEGF6-201ENST00000294599 GTF2F1P35269 517 aaKnown RBP eCLIP18.75■□□□□ 0.591e-11■■■■■ 47.1
MEGF6-201ENST00000294599 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.9■□□□□ 0.38e-8■■■■■ 44.9
MEGF6-201ENST00000294599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.04■□□□□ 0.962e-9■■■■■ 39.6
MEGF6-201ENST00000294599 TRA2AQ13595 282 aaKnown RBP eCLIP14.34□□□□□ -0.113e-8■■■■■ 37.6
MEGF6-201ENST00000294599 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.71■□□□□ 0.268e-6■■■■■ 36.8
MEGF6-201ENST00000294599 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.79■□□□□ 0.447e-8■■■■■ 33.3
MEGF6-201ENST00000294599 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.46■□□□□ 0.235e-9■■■■■ 31.1
MEGF6-201ENST00000294599 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.96■□□□□ 0.312e-7■■■■■ 29.5
MEGF6-201ENST00000294599 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.37■□□□□ 0.053e-12■■■■□ 25.8
MEGF6-201ENST00000294599 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.22■□□□□ 0.196e-7■■■■□ 25
MEGF6-201ENST00000294599 AGGF1Q8N302 714 aaeCLIP17.18■□□□□ 0.342e-6■■■■□ 22.3
MEGF6-201ENST00000294599 SMNDC1O75940 238 aaKnown RBP eCLIP16.68■□□□□ 0.265e-6■■■■□ 22.3
MEGF6-201ENST00000294599 CDC40O60508 579 aaKnown RBP eCLIP15.39■□□□□ 0.055e-6■■■■□ 21.9
MEGF6-201ENST00000294599 NONOQ15233 471 aaKnown RBP eCLIP18.26■□□□□ 0.513e-6■■■■□ 21.9
MEGF6-201ENST00000294599 PPIGQ13427 754 aaKnown RBP eCLIP15.73■□□□□ 0.111e-6■■■■□ 21.3
MEGF6-201ENST00000294599 FKBP4Q02790 459 aaKnown RBP eCLIP19.28■□□□□ 0.684e-8■■■■□ 21.1
MEGF6-201ENST00000294599 SF3B4Q15427 424 aaKnown RBP eCLIP15.3■□□□□ 0.043e-7■■■■□ 20.9
MEGF6-201ENST00000294599 EFTUD2Q15029 972 aaKnown RBP eCLIP17.11■□□□□ 0.332e-6■■■■□ 20.3
MEGF6-201ENST00000294599 RBFOX2O43251 390 aaKnown RBP eCLIP13.65□□□□□ -0.222e-6■■■■□ 19.7
MEGF6-201ENST00000294599 NKRFO15226 690 aaKnown RBP eCLIP17.02■□□□□ 0.313e-6■■■■□ 19.7
MEGF6-201ENST00000294599 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.22■□□□□ 0.676e-9■■■■□ 19.3
MEGF6-201ENST00000294599 DKC1O60832 514 aaKnown RBP eCLIP17.9■□□□□ 0.465e-6■■■■□ 19.3
MEGF6-201ENST00000294599 PABPN1Q86U42 306 aaKnown RBP eCLIP23.97■■□□□ 1.432e-6■■■□□ 18.1
MEGF6-201ENST00000294599 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.88□□□□□ -0.194e-6■■■□□ 17.6
MEGF6-201ENST00000294599 EIF4G2P78344 907 aaKnown RBP eCLIP22.27■■□□□ 1.163e-6■■■□□ 17.3
MEGF6-201ENST00000294599 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18■□□□□ 0.478e-6■■■□□ 14.7
MEGF6-201ENST00000294599 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.47■□□□□ 0.077e-6■■□□□ 14.4
MEGF6-201ENST00000294599 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.3■□□□□ 0.521e-9■■□□□ 14.2
MEGF6-201ENST00000294599 PRPF4O43172 522 aaKnown RBP eCLIP16.77■□□□□ 0.271e-6■■□□□ 12.8
MEGF6-201ENST00000294599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.99■■□□□ 1.113e-6■■□□□ 12.7
Retrieved 35 of 35 RNA–protein pairs in 2024.1 ms