RNA–Protein interactions for RNA: ENST00000280591.10

TRNT1-202, Transcript of tRNA nucleotidyl transferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRNT1, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNT1-202ENST00000280591 NISCHQ9Y2I1 1504 aa30.38■■■□□ 2.45
TRNT1-202ENST00000280591 CCDC180Q9P1Z9 1646 aa27.1■■□□□ 1.93
TRNT1-202ENST00000280591 ABCC9O60706 1549 aa26.75■■□□□ 1.87
TRNT1-202ENST00000280591 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
TRNT1-202ENST00000280591 NACADO15069 1562 aa25.52■■□□□ 1.68
TRNT1-202ENST00000280591 DCAF8L2P0C7V8 631 aa25.46■■□□□ 1.67
TRNT1-202ENST00000280591 MYO15BQ96JP2 1530 aa25.28■■□□□ 1.64
TRNT1-202ENST00000280591 ZCCHC6Q5VYS8 1495 aaKnown RBP25.27■■□□□ 1.64
TRNT1-202ENST00000280591 UNC13AQ9UPW8 1703 aa25.1■■□□□ 1.61
TRNT1-202ENST00000280591 DCAF1Q9Y4B6 1507 aa25.1■■□□□ 1.61
TRNT1-202ENST00000280591 PABPN1Q86U42 306 aaKnown RBP eCLIP24.96■■□□□ 1.59
TRNT1-202ENST00000280591 BICRAQ9NZM4 1560 aa24.89■■□□□ 1.57
TRNT1-202ENST00000280591 DNAJC5BQ9UF47 199 aa24.78■■□□□ 1.56
TRNT1-202ENST00000280591 SCRIBQ14160 1630 aa24.75■■□□□ 1.55
TRNT1-202ENST00000280591 SHROOM4Q9ULL8 1493 aa24.53■■□□□ 1.52
TRNT1-202ENST00000280591 EIF4G1Q04637 1599 aaKnown RBP24.23■■□□□ 1.47
TRNT1-202ENST00000280591 CC2D2AQ9P2K1 1620 aa24.19■■□□□ 1.46
TRNT1-202ENST00000280591 CECR2Q9BXF3 1484 aa24.04■■□□□ 1.44
TRNT1-202ENST00000280591 SMARCA4P51532 1647 aa23.63■■□□□ 1.37
TRNT1-202ENST00000280591 NCAPD3P42695 1498 aa23.55■■□□□ 1.36
TRNT1-202ENST00000280591 BAZ1AQ9NRL2 1556 aaPredicted RBP23.55■■□□□ 1.36
TRNT1-202ENST00000280591 ATAD2BQ9ULI0 1458 aa23.54■■□□□ 1.36
TRNT1-202ENST00000280591 SMARCA2P51531 1590 aa23.49■■□□□ 1.35
TRNT1-202ENST00000280591 MROH2BQ7Z745 1585 aa23.43■■□□□ 1.34
TRNT1-202ENST00000280591 HMGXB3Q12766 1538 aa23.42■■□□□ 1.34
TRNT1-202ENST00000280591 PEG3Q9GZU2 1588 aa23.39■■□□□ 1.33
TRNT1-202ENST00000280591 BAZ1BQ9UIG0 1483 aaKnown RBP23.33■■□□□ 1.33
TRNT1-202ENST00000280591 WIZO95785 1651 aa23.19■■□□□ 1.3
TRNT1-202ENST00000280591 NESP48681 1621 aa23.1■■□□□ 1.29
TRNT1-202ENST00000280591 RSF1Q96T23 1441 aaPredicted RBP23.06■■□□□ 1.28
TRNT1-202ENST00000280591 ERCC6Q03468 1493 aa23.05■■□□□ 1.28
TRNT1-202ENST00000280591 LAMC3Q9Y6N6 1575 aa22.97■■□□□ 1.27
TRNT1-202ENST00000280591 TOP2AP11388 1531 aaKnown RBP22.89■■□□□ 1.25
TRNT1-202ENST00000280591 CUX2O14529 1486 aa22.88■■□□□ 1.25
TRNT1-202ENST00000280591 CADPSQ9ULU8 1353 aa22.85■■□□□ 1.25
TRNT1-202ENST00000280591 KIF21AQ7Z4S6 1674 aa22.83■■□□□ 1.25
TRNT1-202ENST00000280591 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
TRNT1-202ENST00000280591 THOC2Q8NI27 1593 aaKnown RBP22.8■■□□□ 1.24
TRNT1-202ENST00000280591 CFTRP13569 1480 aa22.68■■□□□ 1.22
TRNT1-202ENST00000280591 CCDC88BA6NC98 1476 aa22.63■■□□□ 1.21
TRNT1-202ENST00000280591 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
TRNT1-202ENST00000280591 MRC2Q9UBG0 1479 aa22.6■■□□□ 1.21
TRNT1-202ENST00000280591 CEP164Q9UPV0 1460 aa22.59■■□□□ 1.21
TRNT1-202ENST00000280591 WDR62O43379 1518 aa22.55■■□□□ 1.2
TRNT1-202ENST00000280591 PRDM2Q13029 1718 aa22.52■■□□□ 1.2
TRNT1-202ENST00000280591 DNAJC5Q9H3Z4 198 aa22.44■■□□□ 1.18
TRNT1-202ENST00000280591 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
TRNT1-202ENST00000280591 SUPT5HO00267 1087 aaKnown RBP22.31■■□□□ 1.16
TRNT1-202ENST00000280591 TOPBP1Q92547 1522 aa22.23■■□□□ 1.15
TRNT1-202ENST00000280591 DNMBPQ6XZF7 1577 aa22.17■■□□□ 1.14
TRNT1-202ENST00000280591 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
TRNT1-202ENST00000280591 IFT140Q96RY7 1462 aa22.12■■□□□ 1.13
TRNT1-202ENST00000280591 ZNF608Q9ULD9 1512 aaPredicted RBP22.08■■□□□ 1.13
TRNT1-202ENST00000280591 POLA1P09884 1462 aaPredicted RBP22.02■■□□□ 1.12
TRNT1-202ENST00000280591 TARBP1Q13395 1621 aaKnown RBP22.02■■□□□ 1.12
TRNT1-202ENST00000280591 CUX1P39880 1505 aa21.99■■□□□ 1.11
TRNT1-202ENST00000280591 EIF4G3O43432 1585 aaKnown RBP21.98■■□□□ 1.11
TRNT1-202ENST00000280591 RAD54L2Q9Y4B4 1467 aa21.95■■□□□ 1.1
TRNT1-202ENST00000280591 FGD5Q6ZNL6 1462 aa21.94■■□□□ 1.1
TRNT1-202ENST00000280591 SOGA1O94964 1423 aa21.91■■□□□ 1.1
TRNT1-202ENST00000280591 AQRO60306 1485 aaKnown RBP eCLIP21.91■■□□□ 1.13e-9■■■■■ 37.1
TRNT1-202ENST00000280591 OSCARQ8IYS5 282 aa21.88■■□□□ 1.09
TRNT1-202ENST00000280591 TDRD9Q8NDG6 1382 aaKnown RBP21.83■■□□□ 1.09
TRNT1-202ENST00000280591 WDR97A6NE52 1622 aa21.8■■□□□ 1.08
TRNT1-202ENST00000280591 CHD1O14646 1710 aa21.76■■□□□ 1.07
TRNT1-202ENST00000280591 BIVM-ERCC5R4GMW8 1640 aa21.74■■□□□ 1.07
TRNT1-202ENST00000280591 WRNQ14191 1432 aaPredicted RBP eCLIP21.74■■□□□ 1.07
TRNT1-202ENST00000280591 SYNJ1O43426 1573 aa21.74■■□□□ 1.07
TRNT1-202ENST00000280591 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
TRNT1-202ENST00000280591 SNAPC4Q5SXM2 1469 aa21.7■■□□□ 1.06
TRNT1-202ENST00000280591 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.06
TRNT1-202ENST00000280591 GRIN2BQ13224 1484 aa21.68■■□□□ 1.06
TRNT1-202ENST00000280591 PBRM1Q86U86 1689 aa21.67■■□□□ 1.06
TRNT1-202ENST00000280591 FBLN2P98095 1184 aa21.67■■□□□ 1.06
TRNT1-202ENST00000280591 ABCA5Q8WWZ7 1642 aa21.66■■□□□ 1.06
TRNT1-202ENST00000280591 GAPVD1Q14C86 1478 aa21.66■■□□□ 1.06
TRNT1-202ENST00000280591 MAGI1Q96QZ7 1491 aaPredicted RBP21.64■■□□□ 1.06
TRNT1-202ENST00000280591 TRIM41Q8WV44 630 aa21.62■■□□□ 1.05
TRNT1-202ENST00000280591 RIMBP3CA6NJZ7 1639 aa21.61■■□□□ 1.05
TRNT1-202ENST00000280591 RIMBP3BA6NNM3 1639 aa21.61■■□□□ 1.05
TRNT1-202ENST00000280591 RIMBP3Q9UFD9 1639 aa21.61■■□□□ 1.05
TRNT1-202ENST00000280591 CHMP7Q8WUX9 453 aaPredicted RBP21.57■■□□□ 1.04
TRNT1-202ENST00000280591 SYNJ2O15056 1496 aa21.57■■□□□ 1.04
TRNT1-202ENST00000280591 ARHGEF11O15085 1522 aa21.56■■□□□ 1.04
TRNT1-202ENST00000280591 CLASP1Q7Z460 1538 aa21.5■■□□□ 1.03
TRNT1-202ENST00000280591 ADAMTS12P58397 1594 aa21.46■■□□□ 1.03
TRNT1-202ENST00000280591 ERICH3Q5RHP9 1530 aa21.43■■□□□ 1.02
TRNT1-202ENST00000280591 GRIN2AQ12879 1464 aa21.41■■□□□ 1.02
TRNT1-202ENST00000280591 FHAD1B1AJZ9 1412 aa21.39■■□□□ 1.01
TRNT1-202ENST00000280591 ARAP1Q96P48 1450 aa21.39■■□□□ 1.01
TRNT1-202ENST00000280591 CYB5RLQ6IPT4 315 aa21.36■■□□□ 1.01
TRNT1-202ENST00000280591 CEP170Q5SW79 1584 aa21.35■■□□□ 1.01
TRNT1-202ENST00000280591 NUP160Q12769 1436 aa21.32■■□□□ 1
TRNT1-202ENST00000280591 KIF27Q86VH2 1401 aa21.28■■□□□ 1
TRNT1-202ENST00000280591 IGF1RP08069 1367 aa21.24■□□□□ 0.99
TRNT1-202ENST00000280591 ERCC6L2Q5T890 1561 aa21.22■□□□□ 0.99
TRNT1-202ENST00000280591 SHROOM2Q13796 1616 aa21.21■□□□□ 0.99
TRNT1-202ENST00000280591 CUL7Q14999 1698 aa21.2■□□□□ 0.98
TRNT1-202ENST00000280591 RUSC2Q8N2Y8 1516 aa21.16■□□□□ 0.98
TRNT1-202ENST00000280591 CARMIL1Q5VZK9 1371 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms