RNA–Protein interactions for RNA: ENST00000274787.2

HIGD2A-201, Transcript of HIG1 hypoxia inducible domain family member 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD2A, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD2A-201ENST00000274787 NISCHQ9Y2I1 1504 aa32.48■■■□□ 2.79
HIGD2A-201ENST00000274787 CCDC180Q9P1Z9 1646 aa28.96■■■□□ 2.23
HIGD2A-201ENST00000274787 ABCC9O60706 1549 aa28.1■■■□□ 2.09
HIGD2A-201ENST00000274787 NACADO15069 1562 aa27.18■■□□□ 1.94
HIGD2A-201ENST00000274787 RB1CC1Q8TDY2 1594 aa27.18■■□□□ 1.94
HIGD2A-201ENST00000274787 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
HIGD2A-201ENST00000274787 ZCCHC6Q5VYS8 1495 aaKnown RBP27.08■■□□□ 1.93
HIGD2A-201ENST00000274787 DCAF1Q9Y4B6 1507 aa26.97■■□□□ 1.91
HIGD2A-201ENST00000274787 DCAF8L2P0C7V8 631 aa26.88■■□□□ 1.89
HIGD2A-201ENST00000274787 UNC13AQ9UPW8 1703 aa26.58■■□□□ 1.85
HIGD2A-201ENST00000274787 BICRAQ9NZM4 1560 aa26.34■■□□□ 1.81
HIGD2A-201ENST00000274787 SCRIBQ14160 1630 aa26.27■■□□□ 1.8
HIGD2A-201ENST00000274787 SHROOM4Q9ULL8 1493 aa26.19■■□□□ 1.78
HIGD2A-201ENST00000274787 PABPN1Q86U42 306 aaKnown RBP eCLIP26.19■■□□□ 1.78
HIGD2A-201ENST00000274787 DNAJC5BQ9UF47 199 aa25.73■■□□□ 1.71
HIGD2A-201ENST00000274787 EIF4G1Q04637 1599 aaKnown RBP25.63■■□□□ 1.69
HIGD2A-201ENST00000274787 CC2D2AQ9P2K1 1620 aa25.5■■□□□ 1.67
HIGD2A-201ENST00000274787 CECR2Q9BXF3 1484 aa25.3■■□□□ 1.64
HIGD2A-201ENST00000274787 SMARCA4P51532 1647 aa25.21■■□□□ 1.63
HIGD2A-201ENST00000274787 BAZ1AQ9NRL2 1556 aaPredicted RBP25.19■■□□□ 1.62
HIGD2A-201ENST00000274787 SMARCA2P51531 1590 aa25.06■■□□□ 1.6
HIGD2A-201ENST00000274787 NCAPD3P42695 1498 aa25.06■■□□□ 1.6
HIGD2A-201ENST00000274787 PEG3Q9GZU2 1588 aa25.04■■□□□ 1.6
HIGD2A-201ENST00000274787 ATAD2BQ9ULI0 1458 aa25.03■■□□□ 1.6
HIGD2A-201ENST00000274787 MROH2BQ7Z745 1585 aa24.98■■□□□ 1.59
HIGD2A-201ENST00000274787 HMGXB3Q12766 1538 aa24.96■■□□□ 1.59
HIGD2A-201ENST00000274787 BAZ1BQ9UIG0 1483 aaKnown RBP24.82■■□□□ 1.56
HIGD2A-201ENST00000274787 WIZO95785 1651 aa24.72■■□□□ 1.55
HIGD2A-201ENST00000274787 RSF1Q96T23 1441 aaPredicted RBP24.71■■□□□ 1.55
HIGD2A-201ENST00000274787 TOP2AP11388 1531 aaKnown RBP24.51■■□□□ 1.51
HIGD2A-201ENST00000274787 LAMC3Q9Y6N6 1575 aa24.41■■□□□ 1.5
HIGD2A-201ENST00000274787 NESP48681 1621 aa24.33■■□□□ 1.49
HIGD2A-201ENST00000274787 CADPSQ9ULU8 1353 aa24.28■■□□□ 1.48
HIGD2A-201ENST00000274787 ERCC6Q03468 1493 aa24.24■■□□□ 1.47
HIGD2A-201ENST00000274787 PDS5BQ9NTI5 1447 aa24.19■■□□□ 1.46
HIGD2A-201ENST00000274787 CFTRP13569 1480 aa24.18■■□□□ 1.46
HIGD2A-201ENST00000274787 CCDC88BA6NC98 1476 aa24.17■■□□□ 1.46
HIGD2A-201ENST00000274787 KIF21AQ7Z4S6 1674 aa24.13■■□□□ 1.45
HIGD2A-201ENST00000274787 PRDM2Q13029 1718 aa24.09■■□□□ 1.45
HIGD2A-201ENST00000274787 CUX2O14529 1486 aa24.07■■□□□ 1.44
HIGD2A-201ENST00000274787 THOC2Q8NI27 1593 aaKnown RBP24.07■■□□□ 1.44
HIGD2A-201ENST00000274787 FANCD2Q9BXW9 1451 aa23.99■■□□□ 1.43
HIGD2A-201ENST00000274787 CEP164Q9UPV0 1460 aa23.97■■□□□ 1.43
HIGD2A-201ENST00000274787 SUPT5HO00267 1087 aaKnown RBP23.95■■□□□ 1.42
HIGD2A-201ENST00000274787 MRC2Q9UBG0 1479 aa23.94■■□□□ 1.42
HIGD2A-201ENST00000274787 WDR62O43379 1518 aa23.9■■□□□ 1.42
HIGD2A-201ENST00000274787 URB2Q14146 1524 aaKnown RBP23.75■■□□□ 1.39
HIGD2A-201ENST00000274787 ABCC8Q09428 1581 aa23.69■■□□□ 1.38
HIGD2A-201ENST00000274787 DNMBPQ6XZF7 1577 aa23.63■■□□□ 1.37
HIGD2A-201ENST00000274787 TOPBP1Q92547 1522 aa23.63■■□□□ 1.37
HIGD2A-201ENST00000274787 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
HIGD2A-201ENST00000274787 CUX1P39880 1505 aa23.44■■□□□ 1.34
HIGD2A-201ENST00000274787 POLA1P09884 1462 aaPredicted RBP23.43■■□□□ 1.34
HIGD2A-201ENST00000274787 TARBP1Q13395 1621 aaKnown RBP23.41■■□□□ 1.34
HIGD2A-201ENST00000274787 FGD5Q6ZNL6 1462 aa23.36■■□□□ 1.33
HIGD2A-201ENST00000274787 BIVM-ERCC5R4GMW8 1640 aa23.33■■□□□ 1.32
HIGD2A-201ENST00000274787 WDR97A6NE52 1622 aa23.32■■□□□ 1.32
HIGD2A-201ENST00000274787 ZNF608Q9ULD9 1512 aaPredicted RBP23.31■■□□□ 1.32
HIGD2A-201ENST00000274787 WRNQ14191 1432 aaPredicted RBP eCLIP23.31■■□□□ 1.32
HIGD2A-201ENST00000274787 TOP2BQ02880 1626 aa23.3■■□□□ 1.32
HIGD2A-201ENST00000274787 EIF4G3O43432 1585 aaKnown RBP23.29■■□□□ 1.32
HIGD2A-201ENST00000274787 SOGA1O94964 1423 aa23.29■■□□□ 1.32
HIGD2A-201ENST00000274787 RAD54L2Q9Y4B4 1467 aa23.26■■□□□ 1.31
HIGD2A-201ENST00000274787 SYNJ1O43426 1573 aa23.25■■□□□ 1.31
HIGD2A-201ENST00000274787 DNAJC5Q9H3Z4 198 aa23.22■■□□□ 1.31
HIGD2A-201ENST00000274787 ABCA10Q8WWZ4 1543 aa23.18■■□□□ 1.3
HIGD2A-201ENST00000274787 AQRO60306 1485 aaKnown RBP eCLIP23.17■■□□□ 1.31e-8■■■■□ 26.2
HIGD2A-201ENST00000274787 TDRD9Q8NDG6 1382 aaKnown RBP23.12■■□□□ 1.29
HIGD2A-201ENST00000274787 ABCA5Q8WWZ7 1642 aa23.11■■□□□ 1.29
HIGD2A-201ENST00000274787 GRIN2BQ13224 1484 aa23.06■■□□□ 1.28
HIGD2A-201ENST00000274787 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
HIGD2A-201ENST00000274787 PBRM1Q86U86 1689 aa23.05■■□□□ 1.28
HIGD2A-201ENST00000274787 MAGI1Q96QZ7 1491 aaPredicted RBP23.04■■□□□ 1.28
HIGD2A-201ENST00000274787 OSCARQ8IYS5 282 aa22.99■■□□□ 1.27
HIGD2A-201ENST00000274787 CHD1O14646 1710 aa22.99■■□□□ 1.27
HIGD2A-201ENST00000274787 SNAPC4Q5SXM2 1469 aa22.98■■□□□ 1.27
HIGD2A-201ENST00000274787 ERICH3Q5RHP9 1530 aa22.92■■□□□ 1.26
HIGD2A-201ENST00000274787 SYNJ2O15056 1496 aa22.92■■□□□ 1.26
HIGD2A-201ENST00000274787 ADAMTS12P58397 1594 aa22.86■■□□□ 1.25
HIGD2A-201ENST00000274787 KIF27Q86VH2 1401 aa22.83■■□□□ 1.25
HIGD2A-201ENST00000274787 CHMP7Q8WUX9 453 aaPredicted RBP22.82■■□□□ 1.24
HIGD2A-201ENST00000274787 FHAD1B1AJZ9 1412 aa22.81■■□□□ 1.24
HIGD2A-201ENST00000274787 FBLN2P98095 1184 aa22.8■■□□□ 1.24
HIGD2A-201ENST00000274787 GRIN2AQ12879 1464 aa22.77■■□□□ 1.24
HIGD2A-201ENST00000274787 CLASP1Q7Z460 1538 aa22.77■■□□□ 1.24
HIGD2A-201ENST00000274787 CUL7Q14999 1698 aa22.74■■□□□ 1.23
HIGD2A-201ENST00000274787 IGF1RP08069 1367 aa22.71■■□□□ 1.23
HIGD2A-201ENST00000274787 NUP160Q12769 1436 aa22.69■■□□□ 1.22
HIGD2A-201ENST00000274787 TRIM41Q8WV44 630 aa22.69■■□□□ 1.22
HIGD2A-201ENST00000274787 RIMBP3CA6NJZ7 1639 aa22.66■■□□□ 1.22
HIGD2A-201ENST00000274787 RIMBP3BA6NNM3 1639 aa22.66■■□□□ 1.22
HIGD2A-201ENST00000274787 RIMBP3Q9UFD9 1639 aa22.66■■□□□ 1.22
HIGD2A-201ENST00000274787 ARHGEF11O15085 1522 aa22.66■■□□□ 1.22
HIGD2A-201ENST00000274787 CEP170Q5SW79 1584 aa22.64■■□□□ 1.22
HIGD2A-201ENST00000274787 CARMIL1Q5VZK9 1371 aa22.57■■□□□ 1.2
HIGD2A-201ENST00000274787 SHROOM2Q13796 1616 aa22.56■■□□□ 1.2
HIGD2A-201ENST00000274787 RUSC2Q8N2Y8 1516 aa22.55■■□□□ 1.2
HIGD2A-201ENST00000274787 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
HIGD2A-201ENST00000274787 RAPGEF2Q9Y4G8 1499 aa22.47■■□□□ 1.19
HIGD2A-201ENST00000274787 KIAA0586Q9BVV6 1533 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms