RNA–Protein interactions for RNA: ENST00000274311.2

PELO-201, Transcript of pelota mRNA surveillance and ribosome rescue factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PELO, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PELO-201ENST00000274311 NISCHQ9Y2I1 1504 aa22.23■■□□□ 1.15
PELO-201ENST00000274311 DCAF8L2P0C7V8 631 aa20.34■□□□□ 0.85
PELO-201ENST00000274311 SHROOM4Q9ULL8 1493 aa20.11■□□□□ 0.81
PELO-201ENST00000274311 SUPT5HO00267 1087 aaKnown RBP20.06■□□□□ 0.8
PELO-201ENST00000274311 CCDC180Q9P1Z9 1646 aa19.35■□□□□ 0.69
PELO-201ENST00000274311 EHMT2Q96KQ7 1210 aa18.91■□□□□ 0.62
PELO-201ENST00000274311 PCGF6Q9BYE7 350 aa18.9■□□□□ 0.62
PELO-201ENST00000274311 PELP1Q8IZL8 1130 aaKnown RBP18.83■□□□□ 0.6
PELO-201ENST00000274311 CHIC1Q5VXU3 224 aa18.75■□□□□ 0.59
PELO-201ENST00000274311 FAM9AQ8IZU1 332 aaPredicted RBP18.74■□□□□ 0.59
PELO-201ENST00000274311 ZCCHC6Q5VYS8 1495 aaKnown RBP18.69■□□□□ 0.58
PELO-201ENST00000274311 TRIM41Q8WV44 630 aa18.55■□□□□ 0.56
PELO-201ENST00000274311 LOC105371045A0A1W2PR82 267 aa18.52■□□□□ 0.55
PELO-201ENST00000274311 MYT1Q01538 1121 aa18.51■□□□□ 0.55
PELO-201ENST00000274311 DCAF1Q9Y4B6 1507 aa18.45■□□□□ 0.54
PELO-201ENST00000274311 HRCP23327 699 aa18.43■□□□□ 0.54
PELO-201ENST00000274311 TTBK1Q5TCY1 1321 aaPredicted RBP18.28■□□□□ 0.52
PELO-201ENST00000274311 TRIM26Q12899 539 aaPredicted RBP18.22■□□□□ 0.51
PELO-201ENST00000274311 PPARGC1BQ86YN6 1023 aaKnown RBP18.21■□□□□ 0.51
PELO-201ENST00000274311 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
PELO-201ENST00000274311 ZEB1P37275 1124 aaPredicted RBP18.1■□□□□ 0.49
PELO-201ENST00000274311 ABCC9O60706 1549 aa18.08■□□□□ 0.49
PELO-201ENST00000274311 NACADO15069 1562 aa18.05■□□□□ 0.48
PELO-201ENST00000274311 CCER1Q8TC90 406 aaPredicted RBP18.01■□□□□ 0.47
PELO-201ENST00000274311 UBTFP17480 764 aaKnown RBP17.96■□□□□ 0.47
PELO-201ENST00000274311 RANGAP1P46060 587 aaPredicted RBP17.94■□□□□ 0.46
PELO-201ENST00000274311 APLP2Q06481 763 aa17.94■□□□□ 0.46
PELO-201ENST00000274311 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
PELO-201ENST00000274311 SCRIBQ14160 1630 aa17.84■□□□□ 0.45
PELO-201ENST00000274311 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.7■□□□□ 0.42
PELO-201ENST00000274311 PABPN1Q86U42 306 aaKnown RBP eCLIP17.66■□□□□ 0.42
PELO-201ENST00000274311 RSF1Q96T23 1441 aaPredicted RBP17.64■□□□□ 0.41
PELO-201ENST00000274311 CENPBP07199 599 aaPredicted RBP17.59■□□□□ 0.41
PELO-201ENST00000274311 HNRNPUL2Q1KMD3 747 aaKnown RBP17.52■□□□□ 0.4
PELO-201ENST00000274311 YTHDC1Q96MU7 727 aaKnown RBP17.49■□□□□ 0.39
PELO-201ENST00000274311 ATP1B4Q9UN42 357 aaPredicted RBP17.42■□□□□ 0.38
PELO-201ENST00000274311 CSRNP3Q8WYN3 585 aa17.37■□□□□ 0.37
PELO-201ENST00000274311 DIEXFQ68CQ4 756 aaKnown RBP17.37■□□□□ 0.37
PELO-201ENST00000274311 CECR2Q9BXF3 1484 aa17.36■□□□□ 0.37
PELO-201ENST00000274311 ITGAEP38570 1179 aa17.31■□□□□ 0.36
PELO-201ENST00000274311 BAZ1AQ9NRL2 1556 aaPredicted RBP17.24■□□□□ 0.35
PELO-201ENST00000274311 MROH2BQ7Z745 1585 aa17.18■□□□□ 0.34
PELO-201ENST00000274311 UNC13AQ9UPW8 1703 aa17.15■□□□□ 0.34
PELO-201ENST00000274311 ERICH6Q7L0X2 663 aa17.1■□□□□ 0.33
PELO-201ENST00000274311 ZNF316A6NFI3 1004 aaPredicted RBP17.08■□□□□ 0.33
PELO-201ENST00000274311 GTF3C3Q9Y5Q9 886 aa17.07■□□□□ 0.32
PELO-201ENST00000274311 CEP162Q5TB80 1403 aa17.04■□□□□ 0.32
PELO-201ENST00000274311 ACIN1Q9UKV3 1341 aaKnown RBP17.03■□□□□ 0.32
PELO-201ENST00000274311 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
PELO-201ENST00000274311 BICRAQ9NZM4 1560 aa17.03■□□□□ 0.32
PELO-201ENST00000274311 SCAF1Q9H7N4 1312 aaKnown RBP17.03■□□□□ 0.32
PELO-201ENST00000274311 WIZO95785 1651 aa16.99■□□□□ 0.31
PELO-201ENST00000274311 SOGA1O94964 1423 aa16.95■□□□□ 0.3
PELO-201ENST00000274311 FAM50AQ14320 339 aaKnown RBP16.93■□□□□ 0.3
PELO-201ENST00000274311 ABCC8Q09428 1581 aa16.93■□□□□ 0.3
PELO-201ENST00000274311 NEUROD1Q13562 356 aa16.93■□□□□ 0.3
PELO-201ENST00000274311 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
PELO-201ENST00000274311 TOP2AP11388 1531 aaKnown RBP16.92■□□□□ 0.3
PELO-201ENST00000274311 TNIKQ9UKE5 1360 aa16.92■□□□□ 0.3
PELO-201ENST00000274311 CCDC88BA6NC98 1476 aa16.91■□□□□ 0.3
PELO-201ENST00000274311 EEA1Q15075 1411 aa16.9■□□□□ 0.3
PELO-201ENST00000274311 CLIP1P30622 1438 aa16.9■□□□□ 0.3
PELO-201ENST00000274311 GOLGA3Q08378 1498 aa16.89■□□□□ 0.29
PELO-201ENST00000274311 SMARCA2P51531 1590 aa16.87■□□□□ 0.29
PELO-201ENST00000274311 P3H3Q8IVL6 736 aa16.86■□□□□ 0.29
PELO-201ENST00000274311 NEFLP07196 543 aa16.81■□□□□ 0.28
PELO-201ENST00000274311 PEG3Q9GZU2 1588 aa16.8■□□□□ 0.28
PELO-201ENST00000274311 BAZ1BQ9UIG0 1483 aaKnown RBP16.77■□□□□ 0.28
PELO-201ENST00000274311 CEP164Q9UPV0 1460 aa16.75■□□□□ 0.27
PELO-201ENST00000274311 MIER1Q8N108 512 aa16.74■□□□□ 0.27
PELO-201ENST00000274311 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
PELO-201ENST00000274311 RUSC2Q8N2Y8 1516 aa16.68■□□□□ 0.26
PELO-201ENST00000274311 BCL11AQ9H165 835 aa16.67■□□□□ 0.26
PELO-201ENST00000274311 EIF4G1Q04637 1599 aaKnown RBP16.64■□□□□ 0.25
PELO-201ENST00000274311 CNGB1Q14028 1251 aaPredicted RBP16.6■□□□□ 0.25
PELO-201ENST00000274311 NCAPD3P42695 1498 aa16.6■□□□□ 0.25
PELO-201ENST00000274311 HMGXB3Q12766 1538 aa16.6■□□□□ 0.25
PELO-201ENST00000274311 BCANQ96GW7 911 aa16.6■□□□□ 0.25
PELO-201ENST00000274311 TRIM52Q96A61 297 aa16.59■□□□□ 0.25
PELO-201ENST00000274311 POLR3GLQ9BT43 218 aa16.59■□□□□ 0.25
PELO-201ENST00000274311 ARID3CA6NKF2 412 aa16.56■□□□□ 0.24
PELO-201ENST00000274311 VPS8Q8N3P4 1428 aa16.56■□□□□ 0.24
PELO-201ENST00000274311 KIF27Q86VH2 1401 aa16.55■□□□□ 0.24
PELO-201ENST00000274311 ANP32CO43423 234 aa16.52■□□□□ 0.24
PELO-201ENST00000274311 DDX10Q13206 875 aaKnown RBP16.52■□□□□ 0.24
PELO-201ENST00000274311 KANK4Q5T7N3 995 aaPredicted RBP16.51■□□□□ 0.23
PELO-201ENST00000274311 RAPGEF2Q9Y4G8 1499 aa16.47■□□□□ 0.23
PELO-201ENST00000274311 HIRIP3Q9BW71 556 aaPredicted RBP16.46■□□□□ 0.23
PELO-201ENST00000274311 TONSLQ96HA7 1378 aa16.4■□□□□ 0.22
PELO-201ENST00000274311 CCNB3Q8WWL7 1395 aa16.39■□□□□ 0.21
PELO-201ENST00000274311 CHIC2Q9UKJ5 165 aa16.38■□□□□ 0.21
PELO-201ENST00000274311 CUX2O14529 1486 aa16.37■□□□□ 0.21
PELO-201ENST00000274311 CLSPNQ9HAW4 1339 aa16.37■□□□□ 0.21
PELO-201ENST00000274311 SIN3AQ96ST3 1273 aa16.36■□□□□ 0.21
PELO-201ENST00000274311 MTUS2Q5JR59 1369 aa16.36■□□□□ 0.21
PELO-201ENST00000274311 ZNF326Q5BKZ1 582 aaKnown RBP16.35■□□□□ 0.21
PELO-201ENST00000274311 FBLN2P98095 1184 aa16.35■□□□□ 0.21
PELO-201ENST00000274311 CARMIL1Q5VZK9 1371 aa16.34■□□□□ 0.21
PELO-201ENST00000274311 FKBP8Q14318 412 aa16.33■□□□□ 0.21
PELO-201ENST00000274311 CC2D2AQ9P2K1 1620 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms