RNA–Protein interactions for RNA: ENST00000269814.8

MED16-201, Transcript of mediator complex subunit 16, humanhuman

TSL 5 BASIC

Gene MED16, Length 1,199 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED16-201ENST00000269814 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.72■□□□□ 0.272e-6■■■■■ 163.7
MED16-201ENST00000269814 SF3B1O75533 1304 aaKnown RBP eCLIP19.22■□□□□ 0.671e-7■■■■■ 120.1
MED16-201ENST00000269814 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.9■□□□□ 0.626e-8■■■■■ 117.5
MED16-201ENST00000269814 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.35■■□□□ 1.014e-12■■■■■ 70.6
MED16-201ENST00000269814 AARSP49588 968 aaKnown RBP eCLIP19.1■□□□□ 0.653e-6■■■■■ 61.8
MED16-201ENST00000269814 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.69■□□□□ 0.267e-7■■■■■ 50.8
MED16-201ENST00000269814 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.92■□□□□ 0.622e-7■■■■■ 49.8
MED16-201ENST00000269814 PCBP2Q15366 365 aaKnown RBP eCLIP16.68■□□□□ 0.267e-8■■■■■ 44.8
MED16-201ENST00000269814 EFTUD2Q15029 972 aaKnown RBP eCLIP16.95■□□□□ 0.34e-8■■■■■ 42.6
MED16-201ENST00000269814 NCBP2P52298 156 aaKnown RBP eCLIP16.27■□□□□ 0.21e-7■■■■■ 38.5
MED16-201ENST00000269814 GTF2F1P35269 517 aaKnown RBP eCLIP19.37■□□□□ 0.693e-7■■■■■ 38.3
MED16-201ENST00000269814 SUB1P53999 127 aaKnown RBP eCLIP13.35□□□□□ -0.271e-7■■■■■ 35.6
MED16-201ENST00000269814 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.28■□□□□ 0.361e-7■■■■■ 35.3
MED16-201ENST00000269814 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.46■□□□□ 0.234e-7■■■■■ 34.6
MED16-201ENST00000269814 DDX6P26196 483 aaKnown RBP eCLIP18.7■□□□□ 0.588e-7■■■■■ 33.8
MED16-201ENST00000269814 AGGF1Q8N302 714 aaeCLIP17.27■□□□□ 0.364e-10■■■■■ 33.3
MED16-201ENST00000269814 EWSR1Q01844 656 aaKnown RBP eCLIP12.93□□□□□ -0.344e-7■■■■■ 33.2
MED16-201ENST00000269814 ZRANB2O95218 330 aaKnown RBP eCLIP17.8■□□□□ 0.443e-6■■■■■ 30.1
MED16-201ENST00000269814 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.33■□□□□ 0.524e-8■■■■■ 30.1
MED16-201ENST00000269814 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.2■□□□□ 0.52e-7■■■■■ 29.5
MED16-201ENST00000269814 RBFOX2O43251 390 aaKnown RBP eCLIP13.69□□□□□ -0.222e-8■■■■■ 29.1
MED16-201ENST00000269814 RBM5P52756 815 aaKnown RBP eCLIP21.78■■□□□ 1.082e-8■■■■■ 28.4
MED16-201ENST00000269814 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.99■□□□□ 0.953e-6■■■■■ 27.6
MED16-201ENST00000269814 PRPF4O43172 522 aaKnown RBP eCLIP16.73■□□□□ 0.274e-7■■■■■ 27.5
MED16-201ENST00000269814 DDX59Q5T1V6 619 aaKnown RBP eCLIP16■□□□□ 0.157e-7■■■■■ 27.4
MED16-201ENST00000269814 PUM1Q14671 1186 aaKnown RBP eCLIP17.9■□□□□ 0.463e-6■■■■□ 26.7
MED16-201ENST00000269814 RBM15Q96T37 977 aaKnown RBP eCLIP17.71■□□□□ 0.436e-7■■■■□ 26.3
MED16-201ENST00000269814 SFPQP23246 707 aaKnown RBP eCLIP19.6■□□□□ 0.738e-7■■■■□ 25.8
MED16-201ENST00000269814 AQRO60306 1485 aaKnown RBP eCLIP30.86■■■□□ 2.531e-6■■■■□ 25.8
MED16-201ENST00000269814 METAP2P50579 478 aaKnown RBP eCLIP20.39■□□□□ 0.853e-6■■■■□ 25.7
MED16-201ENST00000269814 ILF3Q12906 894 aaKnown RBP eCLIP17.48■□□□□ 0.392e-7■■■■□ 25.6
MED16-201ENST00000269814 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.01■■□□□ 1.916e-7■■■■□ 25.6
MED16-201ENST00000269814 SMNDC1O75940 238 aaKnown RBP eCLIP15.78■□□□□ 0.122e-6■■■■□ 25.6
MED16-201ENST00000269814 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.66■□□□□ 0.91e-6■■■■□ 25.3
MED16-201ENST00000269814 FTOQ9C0B1 505 aaKnown RBP eCLIP19.92■□□□□ 0.782e-6■■■■□ 24
MED16-201ENST00000269814 HNRNPKP61978 463 aaKnown RBP eCLIP17.64■□□□□ 0.419e-7■■■■□ 22.4
MED16-201ENST00000269814 SF3A3Q12874 501 aaKnown RBP eCLIP15.95■□□□□ 0.141e-10■■■■□ 22.2
MED16-201ENST00000269814 PPIGQ13427 754 aaKnown RBP eCLIP20.01■□□□□ 0.793e-6■■■■□ 22.2
MED16-201ENST00000269814 TAF15Q92804 592 aaKnown RBP eCLIP14.41□□□□□ -0.14e-7■■■■□ 22.2
MED16-201ENST00000269814 SF3B4Q15427 424 aaKnown RBP eCLIP15.93■□□□□ 0.143e-8■■■■□ 21.2
MED16-201ENST00000269814 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.82□□□□□ -0.042e-7■■■■□ 21.2
MED16-201ENST00000269814 GPKOWQ92917 476 aaPredicted RBP eCLIP20.37■□□□□ 0.852e-6■■■■□ 20.4
MED16-201ENST00000269814 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.57■□□□□ 0.564e-9■■■□□ 19
MED16-201ENST00000269814 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.25■□□□□ 0.512e-6■■■□□ 18.3
MED16-201ENST00000269814 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.37■■□□□ 1.012e-6■■■□□ 18.3
MED16-201ENST00000269814 UPF1Q92900 1129 aaKnown RBP eCLIP24.45■■□□□ 1.56e-8■■■□□ 18
MED16-201ENST00000269814 FUSP35637 526 aaKnown RBP eCLIP11.81□□□□□ -0.522e-6■■■□□ 17.8
MED16-201ENST00000269814 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.22■□□□□ 0.511e-6■■■□□ 17.5
MED16-201ENST00000269814 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.41■□□□□ 0.73e-6■■■□□ 17.5
MED16-201ENST00000269814 RPS3P23396 243 aaKnown RBP eCLIP17.18■□□□□ 0.348e-8■■■□□ 16.5
MED16-201ENST00000269814 CDC40O60508 579 aaKnown RBP eCLIP16.21■□□□□ 0.193e-6■■■□□ 16.3
MED16-201ENST00000269814 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.63■□□□□ 0.895e-8■■■□□ 15.9
MED16-201ENST00000269814 PCBP1Q15365 356 aaKnown RBP eCLIP19.52■□□□□ 0.726e-7■■■□□ 15.8
MED16-201ENST00000269814 SAFBQ15424 915 aaKnown RBP eCLIP19.94■□□□□ 0.781e-8■■■□□ 15.6
MED16-201ENST00000269814 PABPC4Q13310 644 aaKnown RBP eCLIP21.04■□□□□ 0.962e-9■■■□□ 15
MED16-201ENST00000269814 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.75□□□□□ -0.057e-7■■■□□ 14.9
MED16-201ENST00000269814 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.01■□□□□ 0.791e-6■■■□□ 14.9
MED16-201ENST00000269814 AATFQ9NY61 560 aaKnown RBP eCLIP21.49■■□□□ 1.037e-6■■■□□ 14.6
MED16-201ENST00000269814 NKRFO15226 690 aaKnown RBP eCLIP20.28■□□□□ 0.841e-6■■□□□ 14.2
MED16-201ENST00000269814 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.31■□□□□ 0.523e-7■■□□□ 14
MED16-201ENST00000269814 HNRNPUQ00839 825 aaKnown RBP eCLIP22.56■■□□□ 1.23e-7■■□□□ 13.2
MED16-201ENST00000269814 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.47■■□□□ 1.037e-7■■□□□ 13
MED16-201ENST00000269814 SRSF9Q13242 221 aaKnown RBP eCLIP10.87□□□□□ -0.671e-6■■□□□ 12.9
MED16-201ENST00000269814 BCCIPQ9P287 314 aaKnown RBP eCLIP18.21■□□□□ 0.512e-6■■□□□ 11.9
MED16-201ENST00000269814 SRSF7Q16629 238 aaKnown RBP eCLIP13.99□□□□□ -0.172e-6■■□□□ 11.8
MED16-201ENST00000269814 DDX3XO00571 662 aaKnown RBP eCLIP18.25■□□□□ 0.511e-9■■□□□ 11.7
MED16-201ENST00000269814 TIA1P31483 386 aaKnown RBP eCLIP16.39■□□□□ 0.211e-9■■□□□ 11.5
MED16-201ENST00000269814 EIF3DO15371 548 aaKnown RBP eCLIP19.19■□□□□ 0.666e-8■□□□□ 10.9
MED16-201ENST00000269814 TROVE2P10155 538 aaKnown RBP eCLIP15.91■□□□□ 0.144e-6■□□□□ 10.1
MED16-201ENST00000269814 FKBP4Q02790 459 aaKnown RBP eCLIP22.47■■□□□ 1.197e-6■□□□□ 9.9
MED16-201ENST00000269814 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.28■■■□□ 2.125e-6■□□□□ 9.5
Retrieved 71 of 71 RNA–protein pairs in 10.7 ms