RNA–Protein interactions for RNA: ENST00000268261.8

PMM2-201, Transcript of phosphomannomutase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMM2, Length 2,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM2-201ENST00000268261 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.28■□□□□ 0.042e-13■■■■■ 89.5
PMM2-201ENST00000268261 FMR1Q06787 632 aaKnown RBP eCLIP16.91■□□□□ 0.34e-34■■■■■ 67
PMM2-201ENST00000268261 RBFOX2O43251 390 aaKnown RBP eCLIP12.22□□□□□ -0.456e-13■■■■■ 60.7
PMM2-201ENST00000268261 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.67□□□□□ -0.225e-15■■■■■ 53.4
PMM2-201ENST00000268261 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.34■□□□□ 0.052e-19■■■■■ 50
PMM2-201ENST00000268261 CSTF2P33240 577 aaKnown RBP eCLIP13.73□□□□□ -0.211e-10■■■■■ 46.7
PMM2-201ENST00000268261 SF3A3Q12874 501 aaKnown RBP eCLIP15.51■□□□□ 0.075e-25■■■■■ 43.1
PMM2-201ENST00000268261 SF3B1O75533 1304 aaKnown RBP eCLIP15.4■□□□□ 0.063e-6■■■■■ 42.4
PMM2-201ENST00000268261 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.75□□□□□ -0.051e-6■■■■■ 30
PMM2-201ENST00000268261 SF3B4Q15427 424 aaKnown RBP eCLIP14.2□□□□□ -0.146e-10■■■■■ 28.6
PMM2-201ENST00000268261 RBM15Q96T37 977 aaKnown RBP eCLIP15.51■□□□□ 0.074e-7■■■■■ 27.3
PMM2-201ENST00000268261 HNRNPMP52272 730 aaKnown RBP eCLIP21.61■■□□□ 1.053e-12■■■■□ 25.8
PMM2-201ENST00000268261 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.78■□□□□ 0.121e-6■■■■□ 25.1
PMM2-201ENST00000268261 EFTUD2Q15029 972 aaKnown RBP eCLIP15.4■□□□□ 0.062e-9■■■■□ 23.2
PMM2-201ENST00000268261 AKAP1Q92667 903 aaKnown RBP eCLIP13.63□□□□□ -0.233e-6■■■■□ 22.6
PMM2-201ENST00000268261 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.94■□□□□ 0.148e-8■■■■□ 21.2
PMM2-201ENST00000268261 AQRO60306 1485 aaKnown RBP eCLIP23.06■■□□□ 1.281e-7■■■■□ 20.2
PMM2-201ENST00000268261 SRSF7Q16629 238 aaKnown RBP eCLIP12.63□□□□□ -0.391e-6■■■■□ 19.3
PMM2-201ENST00000268261 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.7□□□□□ -0.544e-7■■■□□ 19.1
PMM2-201ENST00000268261 ZNF622Q969S3 477 aaKnown RBP eCLIP17.32■□□□□ 0.365e-7■■■□□ 18.2
PMM2-201ENST00000268261 TRA2AQ13595 282 aaKnown RBP eCLIP13.57□□□□□ -0.243e-7■■■□□ 17.8
PMM2-201ENST00000268261 HNRNPCP07910 306 aaKnown RBP eCLIP14.71□□□□□ -0.052e-7■■■□□ 16.5
PMM2-201ENST00000268261 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.69■□□□□ 0.265e-12■■■□□ 16
PMM2-201ENST00000268261 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.59■□□□□ 0.252e-6■■■□□ 15.5
PMM2-201ENST00000268261 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.72□□□□□ -0.217e-7■■□□□ 14.4
PMM2-201ENST00000268261 XRCC6P12956 609 aaKnown RBP eCLIP18.26■□□□□ 0.511e-8■■□□□ 14.1
PMM2-201ENST00000268261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.16■□□□□ 0.988e-8■■□□□ 13.8
PMM2-201ENST00000268261 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.75■□□□□ 0.595e-9■■□□□ 13.6
PMM2-201ENST00000268261 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.21■□□□□ 0.037e-7■■□□□ 13.1
PMM2-201ENST00000268261 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.92■□□□□ 0.32e-10■■□□□ 12.5
PMM2-201ENST00000268261 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.75■□□□□ 0.431e-6■■□□□ 12.1
PMM2-201ENST00000268261 PPIGQ13427 754 aaKnown RBP eCLIP15□□□□□ -0.018e-7■□□□□ 11.3
PMM2-201ENST00000268261 HNRNPKP61978 463 aaKnown RBP eCLIP13.96□□□□□ -0.186e-10■□□□□ 11.1
PMM2-201ENST00000268261 HNRNPLP14866 589 aaKnown RBP eCLIP14.84□□□□□ -0.034e-18■□□□□ 11
PMM2-201ENST00000268261 UPF1Q92900 1129 aaKnown RBP eCLIP16.81■□□□□ 0.284e-9■□□□□ 10.7
PMM2-201ENST00000268261 PRPF4O43172 522 aaKnown RBP eCLIP15.29■□□□□ 0.042e-7■□□□□ 10.3
PMM2-201ENST00000268261 EIF3HO15372 352 aaKnown RBP eCLIP16.05■□□□□ 0.162e-8■□□□□ 9.9
PMM2-201ENST00000268261 METAP2P50579 478 aaKnown RBP eCLIP17.46■□□□□ 0.381e-8■□□□□ 9.9
PMM2-201ENST00000268261 DDX3XO00571 662 aaKnown RBP eCLIP16.19■□□□□ 0.186e-6■□□□□ 8.9
PMM2-201ENST00000268261 SRSF9Q13242 221 aaKnown RBP eCLIP10.92□□□□□ -0.665e-8■□□□□ 8.6
PMM2-201ENST00000268261 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.55■□□□□ 0.084e-7■□□□□ 8.2
PMM2-201ENST00000268261 FTOQ9C0B1 505 aaKnown RBP eCLIP17.43■□□□□ 0.386e-6■□□□□ 8.1
PMM2-201ENST00000268261 SRSF1Q07955 248 aaKnown RBP eCLIP11.92□□□□□ -0.53e-10■□□□□ 8
Retrieved 43 of 43 RNA–protein pairs in 18.6 ms