RNA–Protein interactions for RNA: ENST00000266674.9

LGR5-201, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LGR5, Length 4,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-201ENST00000266674 DDX3XO00571 662 aaKnown RBP eCLIP14.48□□□□□ -0.091e-21■■□□□ 12.3
LGR5-201ENST00000266674 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.97□□□□□ -0.013e-13■□□□□ 8.5
LGR5-201ENST00000266674 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.21□□□□□ -0.295e-13■■■□□ 16.5
LGR5-201ENST00000266674 CSTF2P33240 577 aaKnown RBP eCLIP13.59□□□□□ -0.235e-11■■■□□ 15.9
LGR5-201ENST00000266674 TIA1P31483 386 aaKnown RBP eCLIP13.35□□□□□ -0.271e-10■■■■■ 30
LGR5-201ENST00000266674 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.56□□□□□ -0.082e-10■■■■■ 34
LGR5-201ENST00000266674 WRNQ14191 1432 aaPredicted RBP eCLIP18.45■□□□□ 0.542e-10■■■■■ 91.9
LGR5-201ENST00000266674 NCBP2P52298 156 aaKnown RBP eCLIP13.44□□□□□ -0.262e-9■□□□□ 9.1
LGR5-201ENST00000266674 ZC3H11AO75152 810 aaKnown RBP eCLIP14.43□□□□□ -0.13e-9■■■■□ 26.2
LGR5-201ENST00000266674 HNRNPKP61978 463 aaKnown RBP eCLIP12.78□□□□□ -0.362e-8■■■■■ 28.6
LGR5-201ENST00000266674 PTBP1P26599 531 aaKnown RBP eCLIP12.96□□□□□ -0.332e-8■■■■□ 25.2
LGR5-201ENST00000266674 TIAL1Q01085 375 aaKnown RBP eCLIP12.63□□□□□ -0.392e-8■■■■□ 20.6
LGR5-201ENST00000266674 GTF2F1P35269 517 aaKnown RBP eCLIP16.17■□□□□ 0.182e-8■■■□□ 17.1
LGR5-201ENST00000266674 RBM5P52756 815 aaKnown RBP eCLIP15.74■□□□□ 0.113e-8■■■□□ 16.9
LGR5-201ENST00000266674 HNRNPLP14866 589 aaKnown RBP eCLIP14.04□□□□□ -0.167e-8■■■□□ 15.1
LGR5-201ENST00000266674 QKIQ96PU8 341 aaKnown RBP eCLIP13.92□□□□□ -0.187e-8■■■□□ 16.9
LGR5-201ENST00000266674 RBFOX2O43251 390 aaKnown RBP eCLIP11.67□□□□□ -0.549e-8■■■■□ 22.1
LGR5-201ENST00000266674 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.9■□□□□ 0.142e-7■■■□□ 18.9
LGR5-201ENST00000266674 EIF3HO15372 352 aaKnown RBP eCLIP14.98□□□□□ -0.013e-7■■□□□ 12.7
LGR5-201ENST00000266674 UPF1Q92900 1129 aaKnown RBP eCLIP13.55□□□□□ -0.243e-7■■■□□ 17.1
LGR5-201ENST00000266674 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.24■□□□□ 0.033e-7■■■■□ 21.7
LGR5-201ENST00000266674 SF3A3Q12874 501 aaKnown RBP eCLIP15.4■□□□□ 0.063e-7■□□□□ 8.6
LGR5-201ENST00000266674 MATR3P43243 847 aaKnown RBP eCLIP15.91■□□□□ 0.144e-7■■□□□ 11.4
LGR5-201ENST00000266674 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.15■□□□□ 0.024e-7■□□□□ 11
LGR5-201ENST00000266674 PPIGQ13427 754 aaKnown RBP eCLIP13.4□□□□□ -0.266e-7■■□□□ 13.2
LGR5-201ENST00000266674 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.24□□□□□ -0.616e-7■■■■□ 23
LGR5-201ENST00000266674 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.35□□□□□ -0.117e-7■■■■■ 27.2
LGR5-201ENST00000266674 TAF15Q92804 592 aaKnown RBP eCLIP12.03□□□□□ -0.487e-7■■■■□ 23.1
LGR5-201ENST00000266674 RPS3P23396 243 aaKnown RBP eCLIP13.46□□□□□ -0.257e-7■■■□□ 18.9
LGR5-201ENST00000266674 PCBP1Q15365 356 aaKnown RBP eCLIP13.84□□□□□ -0.199e-7■■□□□ 12.5
LGR5-201ENST00000266674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.32■□□□□ 0.529e-7■□□□□ 10.3
LGR5-201ENST00000266674 FUBP3Q96I24 572 aaKnown RBP eCLIP13.55□□□□□ -0.249e-7■■■■□ 25.6
LGR5-201ENST00000266674 SND1Q7KZF4 910 aaKnown RBP eCLIP15.56■□□□□ 0.081e-6■■■□□ 17.8
LGR5-201ENST00000266674 HNRNPUQ00839 825 aaKnown RBP eCLIP19.09■□□□□ 0.651e-6■■■■□ 21.8
LGR5-201ENST00000266674 U2AF2P26368 475 aaKnown RBP eCLIP15.91■□□□□ 0.141e-6■■■□□ 16.6
LGR5-201ENST00000266674 U2AF1Q01081 240 aaKnown RBP eCLIP17.52■□□□□ 0.41e-6■□□□□ 11.1
LGR5-201ENST00000266674 PCBP2Q15366 365 aaKnown RBP eCLIP13.38□□□□□ -0.272e-6■□□□□ 8.9
LGR5-201ENST00000266674 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.08■□□□□ 0.332e-6■■■■□ 20.9
LGR5-201ENST00000266674 RBM15Q96T37 977 aaKnown RBP eCLIP14.74□□□□□ -0.052e-6■■□□□ 11.8
LGR5-201ENST00000266674 EFTUD2Q15029 972 aaKnown RBP eCLIP14.62□□□□□ -0.073e-6■■■■■ 41.9
LGR5-201ENST00000266674 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.09□□□□□ -0.314e-6■■□□□ 13.3
LGR5-201ENST00000266674 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.93□□□□□ -0.347e-6■□□□□ 9
Retrieved 42 of 42 RNA–protein pairs in 16.4 ms