RNA–Protein interactions for RNA: ENST00000266077.4

SLC2A4RG-201, Transcript of SLC2A4 regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC2A4RG, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC2A4RG-201ENST00000266077 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.4■■■□□ 2.31e-10■■■■■ 359.1
SLC2A4RG-201ENST00000266077 SERBP1Q8NC51 408 aaKnown RBP eCLIP27.53■■■□□ 23e-7■■■■■ 91.3
SLC2A4RG-201ENST00000266077 SF3B4Q15427 424 aaKnown RBP eCLIP24.22■■□□□ 1.477e-9■■■■■ 39.6
SLC2A4RG-201ENST00000266077 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.11■■■□□ 2.252e-13■■■■■ 34
SLC2A4RG-201ENST00000266077 EFTUD2Q15029 972 aaKnown RBP eCLIP27.63■■■□□ 2.013e-12■■■■■ 32.3
SLC2A4RG-201ENST00000266077 FKBP4Q02790 459 aaKnown RBP eCLIP33.1■■■□□ 2.896e-7■■■■■ 31.9
SLC2A4RG-201ENST00000266077 SF3B1O75533 1304 aaKnown RBP eCLIP28.95■■■□□ 2.227e-8■■■■■ 30.2
SLC2A4RG-201ENST00000266077 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.92■■■□□ 2.381e-8■■■■■ 28.6
SLC2A4RG-201ENST00000266077 AQRO60306 1485 aaKnown RBP eCLIP44.3■■■■■ 4.688e-8■■■■□ 26.4
SLC2A4RG-201ENST00000266077 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.38■■■■■ 4.211e-6■■■■□ 23
SLC2A4RG-201ENST00000266077 PCBP1Q15365 356 aaKnown RBP eCLIP29.79■■■□□ 2.364e-6■■■■□ 22.4
SLC2A4RG-201ENST00000266077 SF3A3Q12874 501 aaKnown RBP eCLIP27.1■■□□□ 1.933e-8■■■■□ 20
SLC2A4RG-201ENST00000266077 DDX3XO00571 662 aaKnown RBP eCLIP29.21■■■□□ 2.274e-7■■■■□ 19.9
SLC2A4RG-201ENST00000266077 AATFQ9NY61 560 aaKnown RBP eCLIP32.57■■■□□ 2.86e-8■■■□□ 18.6
SLC2A4RG-201ENST00000266077 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.9■■■□□ 2.547e-12■■■□□ 17.2
SLC2A4RG-201ENST00000266077 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.96■■■□□ 2.394e-11■■■□□ 16.9
SLC2A4RG-201ENST00000266077 SDAD1Q9NVU7 687 aaKnown RBP eCLIP26.56■■□□□ 1.845e-9■■■□□ 16.5
SLC2A4RG-201ENST00000266077 DDX24Q9GZR7 859 aaKnown RBP eCLIP32.98■■■□□ 2.872e-6■■■□□ 16
SLC2A4RG-201ENST00000266077 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.07■■□□□ 1.124e-22■■■□□ 15.9
SLC2A4RG-201ENST00000266077 PTBP1P26599 531 aaKnown RBP eCLIP23.8■■□□□ 1.44e-7■■■□□ 15.4
SLC2A4RG-201ENST00000266077 METAP2P50579 478 aaKnown RBP eCLIP31.96■■■□□ 2.714e-7■■■□□ 15.1
SLC2A4RG-201ENST00000266077 CDC40O60508 579 aaKnown RBP eCLIP24.86■■□□□ 1.571e-7■■■□□ 15
SLC2A4RG-201ENST00000266077 ZC3H11AO75152 810 aaKnown RBP eCLIP29.49■■■□□ 2.314e-8■■■□□ 15
SLC2A4RG-201ENST00000266077 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP41.47■■■■■ 4.236e-11■■■□□ 14.8
SLC2A4RG-201ENST00000266077 FXR2P51116 673 aaKnown RBP eCLIP30.87■■■□□ 2.533e-8■■■□□ 14.6
SLC2A4RG-201ENST00000266077 UPF1Q92900 1129 aaKnown RBP eCLIP33.54■■■□□ 2.965e-9■■□□□ 14.5
SLC2A4RG-201ENST00000266077 PRPF4O43172 522 aaKnown RBP eCLIP27.48■■□□□ 1.991e-6■■□□□ 14.2
SLC2A4RG-201ENST00000266077 SRSF9Q13242 221 aaKnown RBP eCLIP18.53■□□□□ 0.561e-14■■□□□ 14.2
SLC2A4RG-201ENST00000266077 PABPC4Q13310 644 aaKnown RBP eCLIP31.18■■■□□ 2.582e-6■■□□□ 14
SLC2A4RG-201ENST00000266077 RBM5P52756 815 aaKnown RBP eCLIP32.37■■■□□ 2.776e-7■■□□□ 13.9
SLC2A4RG-201ENST00000266077 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP28.41■■■□□ 2.142e-7■■□□□ 13.8
SLC2A4RG-201ENST00000266077 PABPN1Q86U42 306 aaKnown RBP eCLIP49.58■■■■■ 5.534e-8■■□□□ 13.6
SLC2A4RG-201ENST00000266077 LSM11P83369 360 aaKnown RBP eCLIP24.97■■□□□ 1.596e-7■■□□□ 13
SLC2A4RG-201ENST00000266077 SRSF1Q07955 248 aaKnown RBP eCLIP23.11■■□□□ 1.291e-7■■□□□ 12.9
SLC2A4RG-201ENST00000266077 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.43■■■□□ 2.149e-8■■□□□ 12.9
SLC2A4RG-201ENST00000266077 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP26.2■■□□□ 1.794e-7■■□□□ 12.7
SLC2A4RG-201ENST00000266077 LARP4Q71RC2 724 aaKnown RBP eCLIP26.51■■□□□ 1.833e-9■■□□□ 12.7
SLC2A4RG-201ENST00000266077 GTF2F1P35269 517 aaKnown RBP eCLIP29.2■■■□□ 2.266e-6■■□□□ 12.4
SLC2A4RG-201ENST00000266077 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.93■■■□□ 2.224e-15■■□□□ 12
SLC2A4RG-201ENST00000266077 NKRFO15226 690 aaKnown RBP eCLIP30.39■■■□□ 2.452e-7■■□□□ 11.7
SLC2A4RG-201ENST00000266077 PPIGQ13427 754 aaKnown RBP eCLIP29.08■■■□□ 2.251e-13■■□□□ 11.7
SLC2A4RG-201ENST00000266077 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP24.73■■□□□ 1.558e-21■■□□□ 11.6
SLC2A4RG-201ENST00000266077 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.9■■■■□ 3.983e-9■■□□□ 11.6
SLC2A4RG-201ENST00000266077 IGF2BP3O00425 579 aaKnown RBP eCLIP30.85■■■□□ 2.532e-9■■□□□ 11.4
SLC2A4RG-201ENST00000266077 SMNDC1O75940 238 aaKnown RBP eCLIP25.1■■□□□ 1.612e-10■□□□□ 11.3
SLC2A4RG-201ENST00000266077 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP28.61■■■□□ 2.172e-9■□□□□ 10.9
SLC2A4RG-201ENST00000266077 TIA1P31483 386 aaKnown RBP eCLIP26.08■■□□□ 1.773e-9■□□□□ 10.8
SLC2A4RG-201ENST00000266077 WDR43Q15061 677 aaKnown RBP eCLIP36.55■■■■□ 3.445e-6■□□□□ 10.7
SLC2A4RG-201ENST00000266077 PCBP2Q15366 365 aaKnown RBP eCLIP26.65■■□□□ 1.861e-6■□□□□ 10.7
SLC2A4RG-201ENST00000266077 FTOQ9C0B1 505 aaKnown RBP eCLIP31.31■■■□□ 2.61e-6■□□□□ 10.2
SLC2A4RG-201ENST00000266077 RBFOX2O43251 390 aaKnown RBP eCLIP22.24■■□□□ 1.154e-8■□□□□ 9.9
SLC2A4RG-201ENST00000266077 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.59■■■□□ 2.652e-7■□□□□ 9.9
SLC2A4RG-201ENST00000266077 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.79■■□□□ 1.888e-6■□□□□ 9.7
SLC2A4RG-201ENST00000266077 YBX3P16989 372 aaKnown RBP eCLIP32.33■■■□□ 2.773e-7■□□□□ 9.3
SLC2A4RG-201ENST00000266077 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.97■■■□□ 2.236e-7■□□□□ 9.2
SLC2A4RG-201ENST00000266077 DDX59Q5T1V6 619 aaKnown RBP eCLIP25.7■■□□□ 1.72e-14■□□□□ 9
SLC2A4RG-201ENST00000266077 TIAL1Q01085 375 aaKnown RBP eCLIP27.02■■□□□ 1.921e-5■□□□□ 8.6
SLC2A4RG-201ENST00000266077 EIF3HO15372 352 aaKnown RBP eCLIP27.92■■■□□ 2.066e-9■□□□□ 8.2
SLC2A4RG-201ENST00000266077 HNRNPKP61978 463 aaKnown RBP eCLIP26.49■■□□□ 1.835e-10■□□□□ 8.1
Retrieved 59 of 59 RNA–protein pairs in 12.7 ms