RNA–Protein interactions for RNA: ENST00000266022.8

RBM6-201, Transcript of RNA binding motif protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM6, Length 3,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM6-201ENST00000266022 AGGF1Q8N302 714 aaeCLIP15.32■□□□□ 0.042e-25■■■□□ 14.9
RBM6-201ENST00000266022 QKIQ96PU8 341 aaKnown RBP eCLIP14.48□□□□□ -0.091e-19■■■■□ 25.2
RBM6-201ENST00000266022 ILF3Q12906 894 aaKnown RBP eCLIP13.06□□□□□ -0.323e-16■■■■■ 27.6
RBM6-201ENST00000266022 HNRNPLP14866 589 aaKnown RBP eCLIP14.53□□□□□ -0.089e-16■■■□□ 15.7
RBM6-201ENST00000266022 TROVE2P10155 538 aaKnown RBP eCLIP15.19■□□□□ 0.023e-13■■□□□ 11.4
RBM6-201ENST00000266022 SRSF1Q07955 248 aaKnown RBP eCLIP11.12□□□□□ -0.635e-13■■■■■ 39.6
RBM6-201ENST00000266022 ZRANB2O95218 330 aaKnown RBP eCLIP16.64■□□□□ 0.256e-12■■■■□ 20.7
RBM6-201ENST00000266022 PABPN1Q86U42 306 aaKnown RBP eCLIP20.09■□□□□ 0.814e-11■■■□□ 16.2
RBM6-201ENST00000266022 HNRNPKP61978 463 aaKnown RBP eCLIP12.22□□□□□ -0.452e-10■■■■□ 19.3
RBM6-201ENST00000266022 TIA1P31483 386 aaKnown RBP eCLIP13.54□□□□□ -0.243e-10■■■■■ 29.7
RBM6-201ENST00000266022 RBM22Q9NW64 420 aaKnown RBP eCLIP14.18□□□□□ -0.144e-10■■■■■ 38.1
RBM6-201ENST00000266022 XRCC6P12956 609 aaKnown RBP eCLIP18.4■□□□□ 0.547e-10■■■■□ 25.4
RBM6-201ENST00000266022 FXR2P51116 673 aaKnown RBP eCLIP15.41■□□□□ 0.069e-10■□□□□ 9.5
RBM6-201ENST00000266022 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.03□□□□□ -0.324e-9■■■□□ 16.5
RBM6-201ENST00000266022 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.71□□□□□ -0.059e-9■■■■□ 24.9
RBM6-201ENST00000266022 SF3A3Q12874 501 aaKnown RBP eCLIP16■□□□□ 0.151e-8■■■■■ 34
RBM6-201ENST00000266022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.7■□□□□ 0.11e-8■■□□□ 13.1
RBM6-201ENST00000266022 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.77□□□□□ -0.212e-8■■□□□ 11.8
RBM6-201ENST00000266022 EIF4G2P78344 907 aaKnown RBP eCLIP19.46■□□□□ 0.712e-8■■■■□ 24.1
RBM6-201ENST00000266022 AQRO60306 1485 aaKnown RBP eCLIP19.31■□□□□ 0.684e-8■■□□□ 13.2
RBM6-201ENST00000266022 SAFBQ15424 915 aaKnown RBP eCLIP16.18■□□□□ 0.184e-8■■□□□ 14
RBM6-201ENST00000266022 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.61■□□□□ 0.094e-8■□□□□ 10.8
RBM6-201ENST00000266022 SMNDC1O75940 238 aaKnown RBP eCLIP15.54■□□□□ 0.084e-8■■■■□ 20.3
RBM6-201ENST00000266022 U2AF2P26368 475 aaKnown RBP eCLIP17.37■□□□□ 0.374e-8■■□□□ 12.8
RBM6-201ENST00000266022 PPIGQ13427 754 aaKnown RBP eCLIP13.83□□□□□ -0.25e-8■■□□□ 11.4
RBM6-201ENST00000266022 DDX3XO00571 662 aaKnown RBP eCLIP15.47■□□□□ 0.071e-7■■■■□ 23.4
RBM6-201ENST00000266022 KHSRPQ92945 711 aaKnown RBP eCLIP14.42□□□□□ -0.11e-7■■□□□ 12.9
RBM6-201ENST00000266022 EFTUD2Q15029 972 aaKnown RBP eCLIP15.14■□□□□ 0.011e-7■■■□□ 17
RBM6-201ENST00000266022 EIF3DO15371 548 aaKnown RBP eCLIP15.1■□□□□ 0.011e-7■□□□□ 8.4
RBM6-201ENST00000266022 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.74■□□□□ 0.271e-7■■■■□ 20
RBM6-201ENST00000266022 GTF2F1P35269 517 aaKnown RBP eCLIP17.26■□□□□ 0.351e-7■■■■■ 30.9
RBM6-201ENST00000266022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.38■□□□□ 0.532e-7■■■□□ 17.3
RBM6-201ENST00000266022 DKC1O60832 514 aaKnown RBP eCLIP14.9□□□□□ -0.022e-7■■□□□ 13.6
RBM6-201ENST00000266022 ZNF622Q969S3 477 aaKnown RBP eCLIP15.88■□□□□ 0.132e-7■■■□□ 16.9
RBM6-201ENST00000266022 LSM11P83369 360 aaKnown RBP eCLIP13.61□□□□□ -0.232e-7■■□□□ 12.3
RBM6-201ENST00000266022 SF3B4Q15427 424 aaKnown RBP eCLIP14.42□□□□□ -0.12e-7■■■■□ 26.5
RBM6-201ENST00000266022 HNRNPMP52272 730 aaKnown RBP eCLIP18.29■□□□□ 0.522e-7■■■□□ 16.9
RBM6-201ENST00000266022 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.24■□□□□ 0.033e-7■□□□□ 10.2
RBM6-201ENST00000266022 TARDBPQ13148 414 aaKnown RBP eCLIP13.79□□□□□ -0.23e-7■■■■■ 47.2
RBM6-201ENST00000266022 PTBP1P26599 531 aaKnown RBP eCLIP13.45□□□□□ -0.264e-7■■■■■ 27.8
RBM6-201ENST00000266022 MATR3P43243 847 aaKnown RBP eCLIP16.18■□□□□ 0.184e-7■■■■□ 26.7
RBM6-201ENST00000266022 NCBP2P52298 156 aaKnown RBP eCLIP13.33□□□□□ -0.284e-7■■■□□ 17.9
RBM6-201ENST00000266022 TRA2AQ13595 282 aaKnown RBP eCLIP12.29□□□□□ -0.445e-7■■■■■ 30
RBM6-201ENST00000266022 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.72□□□□□ -0.695e-7■■■■□ 25.5
RBM6-201ENST00000266022 PCBP2Q15366 365 aaKnown RBP eCLIP13.83□□□□□ -0.26e-7■■■■■ 35.9
RBM6-201ENST00000266022 PRPF4O43172 522 aaKnown RBP eCLIP15.11■□□□□ 0.016e-7■■□□□ 13.2
RBM6-201ENST00000266022 EIF3HO15372 352 aaKnown RBP eCLIP16.08■□□□□ 0.176e-7■■□□□ 13.5
RBM6-201ENST00000266022 RBM15Q96T37 977 aaKnown RBP eCLIP15.22■□□□□ 0.039e-7■■□□□ 13.2
RBM6-201ENST00000266022 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.16■□□□□ 0.341e-6■■□□□ 12.4
RBM6-201ENST00000266022 GPKOWQ92917 476 aaPredicted RBP eCLIP15.81■□□□□ 0.121e-6■□□□□ 10.9
RBM6-201ENST00000266022 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.43■□□□□ 0.061e-6■■■■■ 90.4
RBM6-201ENST00000266022 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.05■□□□□ 0.161e-6■■■□□ 17.3
RBM6-201ENST00000266022 AARSP49588 968 aaKnown RBP eCLIP16.13■□□□□ 0.172e-6■■■□□ 15.7
RBM6-201ENST00000266022 PUM1Q14671 1186 aaKnown RBP eCLIP13.6□□□□□ -0.232e-6■□□□□ 9.6
RBM6-201ENST00000266022 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.57■□□□□ 0.082e-6■■■■■ 33.5
RBM6-201ENST00000266022 HNRNPCP07910 306 aaKnown RBP eCLIP15□□□□□ -0.013e-6■■□□□ 13.3
RBM6-201ENST00000266022 TIAL1Q01085 375 aaKnown RBP eCLIP14.04□□□□□ -0.163e-6■■■■□ 20.6
RBM6-201ENST00000266022 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.39■□□□□ 0.374e-6■□□□□ 10.3
RBM6-201ENST00000266022 LARP4Q71RC2 724 aaKnown RBP eCLIP14.3□□□□□ -0.125e-6■■■■□ 23.2
RBM6-201ENST00000266022 SF3B1O75533 1304 aaKnown RBP eCLIP14.81□□□□□ -0.045e-6■■■■■ 62.8
RBM6-201ENST00000266022 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.26□□□□□ -0.135e-6■■■■■ 31.7
RBM6-201ENST00000266022 WDR43Q15061 677 aaKnown RBP eCLIP18.51■□□□□ 0.556e-6■□□□□ 10.6
RBM6-201ENST00000266022 AATFQ9NY61 560 aaKnown RBP eCLIP16■□□□□ 0.156e-6■■■■■ 54.7
RBM6-201ENST00000266022 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.35□□□□□ -0.116e-6■■□□□ 12.6
RBM6-201ENST00000266022 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.62□□□□□ -0.398e-6■■■■■ 36.9
Retrieved 65 of 65 RNA–protein pairs in 10.3 ms