RNA–Protein interactions for RNA: ENST00000265755.7

GTF2IRD1-201, Transcript of GTF2I repeat domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-201ENST00000265755 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.35□□□□□ -0.118e-14■■■■■ 37.3
GTF2IRD1-201ENST00000265755 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.86□□□□□ -0.511e-11■■■■□ 25
GTF2IRD1-201ENST00000265755 FMR1Q06787 632 aaKnown RBP eCLIP17.32■□□□□ 0.364e-10■■■■■ 36
GTF2IRD1-201ENST00000265755 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.88□□□□□ -0.034e-10■■■■■ 86.3
GTF2IRD1-201ENST00000265755 ILF3Q12906 894 aaKnown RBP eCLIP13.86□□□□□ -0.197e-10■■■□□ 16.1
GTF2IRD1-201ENST00000265755 PCBP2Q15366 365 aaKnown RBP eCLIP14.74□□□□□ -0.053e-9■■■■■ 40.9
GTF2IRD1-201ENST00000265755 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.6■□□□□ 0.893e-9■■□□□ 14
GTF2IRD1-201ENST00000265755 ZNF622Q969S3 477 aaKnown RBP eCLIP16.75■□□□□ 0.275e-9■■■■■ 36.6
GTF2IRD1-201ENST00000265755 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.79□□□□□ -0.041e-8■■■■□ 22.7
GTF2IRD1-201ENST00000265755 HNRNPLP14866 589 aaKnown RBP eCLIP15.34■□□□□ 0.052e-8■■■□□ 16.5
GTF2IRD1-201ENST00000265755 RBM22Q9NW64 420 aaKnown RBP eCLIP15.27■□□□□ 0.043e-8■■■□□ 18.2
GTF2IRD1-201ENST00000265755 U2AF2P26368 475 aaKnown RBP eCLIP17.57■□□□□ 0.45e-8■■■■■ 34.6
GTF2IRD1-201ENST00000265755 DKC1O60832 514 aaKnown RBP eCLIP15.88■□□□□ 0.136e-8■■■■■ 38.6
GTF2IRD1-201ENST00000265755 AATFQ9NY61 560 aaKnown RBP eCLIP17.22■□□□□ 0.357e-8■■■■■ 73
GTF2IRD1-201ENST00000265755 RBFOX2O43251 390 aaKnown RBP eCLIP12.45□□□□□ -0.427e-8■■■■□ 24.3
GTF2IRD1-201ENST00000265755 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.68□□□□□ -0.228e-8■■■□□ 15.9
GTF2IRD1-201ENST00000265755 SF3A3Q12874 501 aaKnown RBP eCLIP16.51■□□□□ 0.231e-7■■■■□ 20.7
GTF2IRD1-201ENST00000265755 AGGF1Q8N302 714 aaeCLIP15.74■□□□□ 0.111e-7■■■■■ 27.7
GTF2IRD1-201ENST00000265755 LSM11P83369 360 aaKnown RBP eCLIP14.41□□□□□ -0.11e-7■■■■■ 32.8
GTF2IRD1-201ENST00000265755 TARDBPQ13148 414 aaKnown RBP eCLIP14.35□□□□□ -0.112e-7■■■■□ 22.6
GTF2IRD1-201ENST00000265755 DDX6P26196 483 aaKnown RBP eCLIP14.19□□□□□ -0.143e-7■■■■■ 42.5
GTF2IRD1-201ENST00000265755 PPIGQ13427 754 aaKnown RBP eCLIP14.48□□□□□ -0.093e-7■■□□□ 13.8
GTF2IRD1-201ENST00000265755 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.02■□□□□ 0.159e-7■■■□□ 17.7
GTF2IRD1-201ENST00000265755 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.41■□□□□ 0.229e-7■■■■□ 19.4
GTF2IRD1-201ENST00000265755 EIF4G2P78344 907 aaKnown RBP eCLIP21.01■□□□□ 0.951e-6■■■■■ 40.9
GTF2IRD1-201ENST00000265755 AQRO60306 1485 aaKnown RBP eCLIP21.26■□□□□ 0.991e-6■■■■■ 28.3
GTF2IRD1-201ENST00000265755 KHSRPQ92945 711 aaKnown RBP eCLIP15.6■□□□□ 0.091e-6■■□□□ 12
GTF2IRD1-201ENST00000265755 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.38■□□□□ 0.211e-6■■■□□ 17.2
GTF2IRD1-201ENST00000265755 DDX3XO00571 662 aaKnown RBP eCLIP16.45■□□□□ 0.221e-6■■■■□ 22.3
GTF2IRD1-201ENST00000265755 NKRFO15226 690 aaKnown RBP eCLIP16.99■□□□□ 0.311e-6■■□□□ 13.4
GTF2IRD1-201ENST00000265755 PRPF4O43172 522 aaKnown RBP eCLIP15.75■□□□□ 0.111e-6■■■□□ 18.6
GTF2IRD1-201ENST00000265755 SF3B4Q15427 424 aaKnown RBP eCLIP14.31□□□□□ -0.121e-6■■■■■ 34.5
GTF2IRD1-201ENST00000265755 NONOQ15233 471 aaKnown RBP eCLIP16.86■□□□□ 0.291e-6■■■□□ 18
GTF2IRD1-201ENST00000265755 SFPQP23246 707 aaKnown RBP eCLIP17.41■□□□□ 0.382e-6■■■■□ 24
GTF2IRD1-201ENST00000265755 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.64■□□□□ 0.092e-6■■■□□ 16.1
GTF2IRD1-201ENST00000265755 SF3B1O75533 1304 aaKnown RBP eCLIP15.3■□□□□ 0.042e-6■■■■■ 128.1
GTF2IRD1-201ENST00000265755 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.16■□□□□ 0.182e-6■■■■■ 28.1
GTF2IRD1-201ENST00000265755 EFTUD2Q15029 972 aaKnown RBP eCLIP15.96■□□□□ 0.142e-6■■■■□ 19.9
GTF2IRD1-201ENST00000265755 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.6■□□□□ 0.252e-6■■■■■ 85.5
GTF2IRD1-201ENST00000265755 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.5■□□□□ 0.392e-6■■■■□ 20.9
GTF2IRD1-201ENST00000265755 HNRNPKP61978 463 aaKnown RBP eCLIP13.46□□□□□ -0.263e-6■□□□□ 9.8
GTF2IRD1-201ENST00000265755 EWSR1Q01844 656 aaKnown RBP eCLIP12.96□□□□□ -0.333e-6■■□□□ 13
GTF2IRD1-201ENST00000265755 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.04■□□□□ 0.83e-6■■■■■ 27.3
GTF2IRD1-201ENST00000265755 TIAL1Q01085 375 aaKnown RBP eCLIP15.04■□□□□ -04e-6■■■□□ 15.5
GTF2IRD1-201ENST00000265755 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.6□□□□□ -0.075e-6■■□□□ 13.9
GTF2IRD1-201ENST00000265755 AARSP49588 968 aaKnown RBP eCLIP16.55■□□□□ 0.245e-6■■■■■ 58.2
GTF2IRD1-201ENST00000265755 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.15■□□□□ 0.988e-6■■□□□ 11.9
GTF2IRD1-201ENST00000265755 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.8■□□□□ 0.129e-6■□□□□ 10.2
GTF2IRD1-201ENST00000265755 YBX3P16989 372 aaKnown RBP eCLIP15.37■□□□□ 0.059e-6■■■□□ 18.6
Retrieved 49 of 49 RNA–protein pairs in 9.2 ms