RNA–Protein interactions for RNA: ENST00000264720.7

GTF3C2-201, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,882 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-201ENST00000264720 NISCHQ9Y2I1 1504 aa23.14■■□□□ 1.29
GTF3C2-201ENST00000264720 CCDC180Q9P1Z9 1646 aa20.18■□□□□ 0.82
GTF3C2-201ENST00000264720 ZCCHC6Q5VYS8 1495 aaKnown RBP19.43■□□□□ 0.7
GTF3C2-201ENST00000264720 DCAF8L2P0C7V8 631 aa19.2■□□□□ 0.66
GTF3C2-201ENST00000264720 DCAF1Q9Y4B6 1507 aa19.14■□□□□ 0.66
GTF3C2-201ENST00000264720 ABCC9O60706 1549 aa19.03■□□□□ 0.64
GTF3C2-201ENST00000264720 SHROOM4Q9ULL8 1493 aa18.93■□□□□ 0.62
GTF3C2-201ENST00000264720 MYO15BQ96JP2 1530 aa18.9■□□□□ 0.62
GTF3C2-201ENST00000264720 NACADO15069 1562 aa18.8■□□□□ 0.6
GTF3C2-201ENST00000264720 RB1CC1Q8TDY2 1594 aa18.63■□□□□ 0.57
GTF3C2-201ENST00000264720 SCRIBQ14160 1630 aa18.54■□□□□ 0.56
GTF3C2-201ENST00000264720 SUPT5HO00267 1087 aaKnown RBP18.29■□□□□ 0.52
GTF3C2-201ENST00000264720 UNC13AQ9UPW8 1703 aa18.17■□□□□ 0.5
GTF3C2-201ENST00000264720 BICRAQ9NZM4 1560 aa17.97■□□□□ 0.47
GTF3C2-201ENST00000264720 RSF1Q96T23 1441 aaPredicted RBP17.96■□□□□ 0.47
GTF3C2-201ENST00000264720 PABPN1Q86U42 306 aaKnown RBP eCLIP17.95■□□□□ 0.46
GTF3C2-201ENST00000264720 CECR2Q9BXF3 1484 aa17.94■□□□□ 0.46
GTF3C2-201ENST00000264720 BAZ1AQ9NRL2 1556 aaPredicted RBP17.9■□□□□ 0.46
GTF3C2-201ENST00000264720 MROH2BQ7Z745 1585 aa17.85■□□□□ 0.45
GTF3C2-201ENST00000264720 SMARCA4P51532 1647 aa17.77■□□□□ 0.44
GTF3C2-201ENST00000264720 WIZO95785 1651 aa17.71■□□□□ 0.43
GTF3C2-201ENST00000264720 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
GTF3C2-201ENST00000264720 PELP1Q8IZL8 1130 aaKnown RBP17.56■□□□□ 0.4
GTF3C2-201ENST00000264720 PEG3Q9GZU2 1588 aa17.54■□□□□ 0.4
GTF3C2-201ENST00000264720 PPARGC1BQ86YN6 1023 aaKnown RBP17.52■□□□□ 0.4
GTF3C2-201ENST00000264720 SMARCA2P51531 1590 aa17.51■□□□□ 0.39
GTF3C2-201ENST00000264720 CHIC1Q5VXU3 224 aa17.5■□□□□ 0.39
GTF3C2-201ENST00000264720 EIF4G1Q04637 1599 aaKnown RBP17.47■□□□□ 0.39
GTF3C2-201ENST00000264720 ATAD2BQ9ULI0 1458 aa17.47■□□□□ 0.39
GTF3C2-201ENST00000264720 HRCP23327 699 aa17.46■□□□□ 0.38
GTF3C2-201ENST00000264720 BAZ1BQ9UIG0 1483 aaKnown RBP17.42■□□□□ 0.38
GTF3C2-201ENST00000264720 CCDC88BA6NC98 1476 aa17.37■□□□□ 0.37
GTF3C2-201ENST00000264720 NCAPD3P42695 1498 aa17.32■□□□□ 0.36
GTF3C2-201ENST00000264720 HMGXB3Q12766 1538 aa17.31■□□□□ 0.36
GTF3C2-201ENST00000264720 PCGF6Q9BYE7 350 aa17.3■□□□□ 0.36
GTF3C2-201ENST00000264720 TRIM41Q8WV44 630 aa17.22■□□□□ 0.35
GTF3C2-201ENST00000264720 CC2D2AQ9P2K1 1620 aa17.2■□□□□ 0.34
GTF3C2-201ENST00000264720 ABCC8Q09428 1581 aa17■□□□□ 0.31
GTF3C2-201ENST00000264720 MYT1Q01538 1121 aa16.96■□□□□ 0.31
GTF3C2-201ENST00000264720 WRNQ14191 1432 aaPredicted RBP eCLIP16.95■□□□□ 0.3
GTF3C2-201ENST00000264720 CFTRP13569 1480 aa16.95■□□□□ 0.3
GTF3C2-201ENST00000264720 SCAF1Q9H7N4 1312 aaKnown RBP16.95■□□□□ 0.3
GTF3C2-201ENST00000264720 CADPSQ9ULU8 1353 aa16.91■□□□□ 0.3
GTF3C2-201ENST00000264720 FAM9AQ8IZU1 332 aaPredicted RBP16.88■□□□□ 0.29
GTF3C2-201ENST00000264720 PRDM2Q13029 1718 aa16.88■□□□□ 0.29
GTF3C2-201ENST00000264720 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
GTF3C2-201ENST00000264720 LOC105371045A0A1W2PR82 267 aa16.81■□□□□ 0.28
GTF3C2-201ENST00000264720 EEA1Q15075 1411 aa16.79■□□□□ 0.28
GTF3C2-201ENST00000264720 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
GTF3C2-201ENST00000264720 BIVM-ERCC5R4GMW8 1640 aa16.75■□□□□ 0.27
GTF3C2-201ENST00000264720 LAMC3Q9Y6N6 1575 aa16.75■□□□□ 0.27
GTF3C2-201ENST00000264720 FANCD2Q9BXW9 1451 aa16.71■□□□□ 0.27
GTF3C2-201ENST00000264720 SOGA1O94964 1423 aa16.7■□□□□ 0.26
GTF3C2-201ENST00000264720 CUX1P39880 1505 aa16.7■□□□□ 0.26
GTF3C2-201ENST00000264720 NESP48681 1621 aa16.68■□□□□ 0.26
GTF3C2-201ENST00000264720 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
GTF3C2-201ENST00000264720 PDS5BQ9NTI5 1447 aa16.66■□□□□ 0.26
GTF3C2-201ENST00000264720 DNAJC5BQ9UF47 199 aa16.66■□□□□ 0.26
GTF3C2-201ENST00000264720 CEP164Q9UPV0 1460 aa16.62■□□□□ 0.25
GTF3C2-201ENST00000264720 EHMT2Q96KQ7 1210 aa16.62■□□□□ 0.25
GTF3C2-201ENST00000264720 RUSC2Q8N2Y8 1516 aa16.61■□□□□ 0.25
GTF3C2-201ENST00000264720 DNMBPQ6XZF7 1577 aa16.57■□□□□ 0.24
GTF3C2-201ENST00000264720 KIF27Q86VH2 1401 aa16.55■□□□□ 0.24
GTF3C2-201ENST00000264720 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
GTF3C2-201ENST00000264720 GOLGA3Q08378 1498 aa16.53■□□□□ 0.24
GTF3C2-201ENST00000264720 TOPBP1Q92547 1522 aa16.52■□□□□ 0.24
GTF3C2-201ENST00000264720 UBTFP17480 764 aaKnown RBP16.51■□□□□ 0.23
GTF3C2-201ENST00000264720 KIF21BO75037 1637 aa16.5■□□□□ 0.23
GTF3C2-201ENST00000264720 KIF21AQ7Z4S6 1674 aa16.49■□□□□ 0.23
GTF3C2-201ENST00000264720 TNIKQ9UKE5 1360 aa16.48■□□□□ 0.23
GTF3C2-201ENST00000264720 CUX2O14529 1486 aa16.46■□□□□ 0.23
GTF3C2-201ENST00000264720 GTF3C3Q9Y5Q9 886 aa16.46■□□□□ 0.23
GTF3C2-201ENST00000264720 URB2Q14146 1524 aaKnown RBP16.46■□□□□ 0.22
GTF3C2-201ENST00000264720 POLA1P09884 1462 aaPredicted RBP16.44■□□□□ 0.22
GTF3C2-201ENST00000264720 MRC2Q9UBG0 1479 aa16.41■□□□□ 0.22
GTF3C2-201ENST00000264720 ERICH3Q5RHP9 1530 aa16.4■□□□□ 0.22
GTF3C2-201ENST00000264720 ABCA10Q8WWZ4 1543 aa16.39■□□□□ 0.21
GTF3C2-201ENST00000264720 PRXQ9BXM0 1461 aa16.38■□□□□ 0.21
GTF3C2-201ENST00000264720 CEP162Q5TB80 1403 aa16.38■□□□□ 0.21
GTF3C2-201ENST00000264720 RAD54L2Q9Y4B4 1467 aa16.38■□□□□ 0.21
GTF3C2-201ENST00000264720 NEUROD1Q13562 356 aa16.38■□□□□ 0.21
GTF3C2-201ENST00000264720 ERCC6Q03468 1493 aa16.37■□□□□ 0.21
GTF3C2-201ENST00000264720 RAPGEF2Q9Y4G8 1499 aa16.37■□□□□ 0.21
GTF3C2-201ENST00000264720 IGF1RP08069 1367 aa16.34■□□□□ 0.21
GTF3C2-201ENST00000264720 ACIN1Q9UKV3 1341 aaKnown RBP16.33■□□□□ 0.2
GTF3C2-201ENST00000264720 CARMIL1Q5VZK9 1371 aa16.3■□□□□ 0.2
GTF3C2-201ENST00000264720 WDR97A6NE52 1622 aa16.29■□□□□ 0.2
GTF3C2-201ENST00000264720 WDR62O43379 1518 aa16.28■□□□□ 0.2
GTF3C2-201ENST00000264720 CLIP1P30622 1438 aa16.27■□□□□ 0.19
GTF3C2-201ENST00000264720 GAPVD1Q14C86 1478 aa16.24■□□□□ 0.19
GTF3C2-201ENST00000264720 CUL7Q14999 1698 aa16.24■□□□□ 0.19
GTF3C2-201ENST00000264720 TARBP1Q13395 1621 aaKnown RBP16.24■□□□□ 0.19
GTF3C2-201ENST00000264720 TDRD9Q8NDG6 1382 aaKnown RBP16.24■□□□□ 0.19
GTF3C2-201ENST00000264720 CENPBP07199 599 aaPredicted RBP16.23■□□□□ 0.19
GTF3C2-201ENST00000264720 YTHDC1Q96MU7 727 aaKnown RBP16.23■□□□□ 0.19
GTF3C2-201ENST00000264720 ABCA5Q8WWZ7 1642 aa16.23■□□□□ 0.19
GTF3C2-201ENST00000264720 IFT140Q96RY7 1462 aa16.22■□□□□ 0.19
GTF3C2-201ENST00000264720 THOC2Q8NI27 1593 aaKnown RBP16.19■□□□□ 0.18
GTF3C2-201ENST00000264720 TRIM26Q12899 539 aaPredicted RBP16.19■□□□□ 0.18
GTF3C2-201ENST00000264720 RANGAP1P46060 587 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms