RNA–Protein interactions for RNA: ENST00000264088.8

SLC25A23-201, Transcript of solute carrier family 25 member 23, humanhuman

TSL 1 (best)

Gene SLC25A23, Length 2,056 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A23-201ENST00000264088 NISCHQ9Y2I1 1504 aa55.17■■■■■ 6.42
SLC25A23-201ENST00000264088 CCDC180Q9P1Z9 1646 aa48.11■■■■■ 5.29
SLC25A23-201ENST00000264088 ZCCHC6Q5VYS8 1495 aaKnown RBP46.38■■■■■ 5.02
SLC25A23-201ENST00000264088 DCAF1Q9Y4B6 1507 aa45.64■■■■■ 4.9
SLC25A23-201ENST00000264088 DCAF8L2P0C7V8 631 aa45.46■■■■■ 4.87
SLC25A23-201ENST00000264088 ABCC9O60706 1549 aa45.4■■■■■ 4.86
SLC25A23-201ENST00000264088 MYO15BQ96JP2 1530 aa45.09■■■■■ 4.81
SLC25A23-201ENST00000264088 SHROOM4Q9ULL8 1493 aa44.99■■■■■ 4.79
SLC25A23-201ENST00000264088 NACADO15069 1562 aa44.78■■■■■ 4.76
SLC25A23-201ENST00000264088 RB1CC1Q8TDY2 1594 aa44.37■■■■■ 4.69
SLC25A23-201ENST00000264088 SCRIBQ14160 1630 aa44.22■■■■■ 4.67
SLC25A23-201ENST00000264088 UNC13AQ9UPW8 1703 aa43.52■■■■■ 4.56
SLC25A23-201ENST00000264088 SUPT5HO00267 1087 aaKnown RBP43.29■■■■■ 4.52
SLC25A23-201ENST00000264088 BICRAQ9NZM4 1560 aa43.06■■■■■ 4.48
SLC25A23-201ENST00000264088 CECR2Q9BXF3 1484 aa42.86■■■■■ 4.45
SLC25A23-201ENST00000264088 RSF1Q96T23 1441 aaPredicted RBP42.82■■■■■ 4.44
SLC25A23-201ENST00000264088 PABPN1Q86U42 306 aaKnown RBP eCLIP42.81■■■■■ 4.44
SLC25A23-201ENST00000264088 MROH2BQ7Z745 1585 aa42.63■■■■■ 4.41
SLC25A23-201ENST00000264088 BAZ1AQ9NRL2 1556 aaPredicted RBP42.6■■■■■ 4.41
SLC25A23-201ENST00000264088 SMARCA4P51532 1647 aa42.41■■■■■ 4.38
SLC25A23-201ENST00000264088 WIZO95785 1651 aa42.28■■■■■ 4.36
SLC25A23-201ENST00000264088 PEG3Q9GZU2 1588 aa41.92■■■■■ 4.3
SLC25A23-201ENST00000264088 TOP2AP11388 1531 aaKnown RBP41.85■■■■■ 4.29
SLC25A23-201ENST00000264088 EIF4G1Q04637 1599 aaKnown RBP41.75■■■■■ 4.27
SLC25A23-201ENST00000264088 ATAD2BQ9ULI0 1458 aa41.69■■■■■ 4.27
SLC25A23-201ENST00000264088 SMARCA2P51531 1590 aa41.67■■■■■ 4.26
SLC25A23-201ENST00000264088 CHIC1Q5VXU3 224 aa41.49■■■■■ 4.23
SLC25A23-201ENST00000264088 BAZ1BQ9UIG0 1483 aaKnown RBP41.46■■■■■ 4.23
SLC25A23-201ENST00000264088 CCDC88BA6NC98 1476 aa41.41■■■■■ 4.22
SLC25A23-201ENST00000264088 NCAPD3P42695 1498 aa41.33■■■■■ 4.21
SLC25A23-201ENST00000264088 HMGXB3Q12766 1538 aa41.29■■■■■ 4.2
SLC25A23-201ENST00000264088 CC2D2AQ9P2K1 1620 aa41.12■■■■■ 4.17
SLC25A23-201ENST00000264088 TRIM41Q8WV44 630 aa40.72■■■■■ 4.11
SLC25A23-201ENST00000264088 ABCC8Q09428 1581 aa40.56■■■■■ 4.08
SLC25A23-201ENST00000264088 CFTRP13569 1480 aa40.44■■■■■ 4.06
SLC25A23-201ENST00000264088 WRNQ14191 1432 aaPredicted RBP eCLIP40.3■■■■■ 4.04
SLC25A23-201ENST00000264088 CADPSQ9ULU8 1353 aa40.26■■■■■ 4.04
SLC25A23-201ENST00000264088 PRDM2Q13029 1718 aa40.25■■■■■ 4.03
SLC25A23-201ENST00000264088 SYNJ1O43426 1573 aa40.15■■■■■ 4.02
SLC25A23-201ENST00000264088 DNAJC5BQ9UF47 199 aa40.04■■■■■ 4
SLC25A23-201ENST00000264088 TOP2BQ02880 1626 aa39.98■■■■□ 3.99
SLC25A23-201ENST00000264088 FAM9AQ8IZU1 332 aaPredicted RBP39.95■■■■□ 3.99
SLC25A23-201ENST00000264088 BIVM-ERCC5R4GMW8 1640 aa39.94■■■■□ 3.98
SLC25A23-201ENST00000264088 LAMC3Q9Y6N6 1575 aa39.92■■■■□ 3.98
SLC25A23-201ENST00000264088 NESP48681 1621 aa39.89■■■■□ 3.98
SLC25A23-201ENST00000264088 LOC105371045A0A1W2PR82 267 aa39.89■■■■□ 3.98
SLC25A23-201ENST00000264088 CUX1P39880 1505 aa39.86■■■■□ 3.97
SLC25A23-201ENST00000264088 FANCD2Q9BXW9 1451 aa39.83■■■■□ 3.97
SLC25A23-201ENST00000264088 SOGA1O94964 1423 aa39.8■■■■□ 3.96
SLC25A23-201ENST00000264088 EEA1Q15075 1411 aa39.74■■■■□ 3.95
SLC25A23-201ENST00000264088 RUSC2Q8N2Y8 1516 aa39.65■■■■□ 3.94
SLC25A23-201ENST00000264088 PDS5BQ9NTI5 1447 aa39.59■■■■□ 3.93
SLC25A23-201ENST00000264088 CEP164Q9UPV0 1460 aa39.57■■■■□ 3.93
SLC25A23-201ENST00000264088 CSRNP3Q8WYN3 585 aa39.49■■■■□ 3.91
SLC25A23-201ENST00000264088 DNMBPQ6XZF7 1577 aa39.49■■■■□ 3.91
SLC25A23-201ENST00000264088 KIF21AQ7Z4S6 1674 aa39.43■■■■□ 3.9
SLC25A23-201ENST00000264088 FGD5Q6ZNL6 1462 aa39.41■■■■□ 3.9
SLC25A23-201ENST00000264088 TOPBP1Q92547 1522 aa39.4■■■■□ 3.9
SLC25A23-201ENST00000264088 EHMT2Q96KQ7 1210 aa39.37■■■■□ 3.89
SLC25A23-201ENST00000264088 URB2Q14146 1524 aaKnown RBP39.33■■■■□ 3.89
SLC25A23-201ENST00000264088 KIF27Q86VH2 1401 aa39.27■■■■□ 3.88
SLC25A23-201ENST00000264088 KIF21BO75037 1637 aa39.24■■■■□ 3.87
SLC25A23-201ENST00000264088 POLA1P09884 1462 aaPredicted RBP39.22■■■■□ 3.87
SLC25A23-201ENST00000264088 GOLGA3Q08378 1498 aa39.2■■■■□ 3.87
SLC25A23-201ENST00000264088 CUX2O14529 1486 aa39.15■■■■□ 3.86
SLC25A23-201ENST00000264088 MRC2Q9UBG0 1479 aa39.09■■■■□ 3.85
SLC25A23-201ENST00000264088 RAD54L2Q9Y4B4 1467 aa39.08■■■■□ 3.85
SLC25A23-201ENST00000264088 TNIKQ9UKE5 1360 aa39.07■■■■□ 3.85
SLC25A23-201ENST00000264088 ABCA10Q8WWZ4 1543 aa39.07■■■■□ 3.85
SLC25A23-201ENST00000264088 PRXQ9BXM0 1461 aa39.03■■■■□ 3.84
SLC25A23-201ENST00000264088 RAPGEF2Q9Y4G8 1499 aa39■■■■□ 3.83
SLC25A23-201ENST00000264088 ERICH3Q5RHP9 1530 aa38.98■■■■□ 3.83
SLC25A23-201ENST00000264088 UBTFP17480 764 aaKnown RBP38.98■■■■□ 3.83
SLC25A23-201ENST00000264088 WDR97A6NE52 1622 aa38.96■■■■□ 3.83
SLC25A23-201ENST00000264088 ERCC6Q03468 1493 aa38.92■■■■□ 3.82
SLC25A23-201ENST00000264088 IGF1RP08069 1367 aa38.91■■■■□ 3.82
SLC25A23-201ENST00000264088 WDR62O43379 1518 aa38.9■■■■□ 3.82
SLC25A23-201ENST00000264088 CEP162Q5TB80 1403 aa38.88■■■■□ 3.81
SLC25A23-201ENST00000264088 TARBP1Q13395 1621 aaKnown RBP38.83■■■■□ 3.81
SLC25A23-201ENST00000264088 THOC2Q8NI27 1593 aaKnown RBP38.78■■■■□ 3.8
SLC25A23-201ENST00000264088 ABCA5Q8WWZ7 1642 aa38.77■■■■□ 3.8
SLC25A23-201ENST00000264088 CARMIL1Q5VZK9 1371 aa38.71■■■■□ 3.79
SLC25A23-201ENST00000264088 TDRD9Q8NDG6 1382 aaKnown RBP38.68■■■■□ 3.78
SLC25A23-201ENST00000264088 GAPVD1Q14C86 1478 aa38.66■■■■□ 3.78
SLC25A23-201ENST00000264088 CUL7Q14999 1698 aa38.63■■■■□ 3.78
SLC25A23-201ENST00000264088 IFT140Q96RY7 1462 aa38.62■■■■□ 3.77
SLC25A23-201ENST00000264088 CLIP1P30622 1438 aa38.56■■■■□ 3.76
SLC25A23-201ENST00000264088 PBRM1Q86U86 1689 aa38.45■■■■□ 3.75
SLC25A23-201ENST00000264088 AQRO60306 1485 aaKnown RBP eCLIP38.44■■■■□ 3.742e-6■■■■□ 21.7
SLC25A23-201ENST00000264088 ZNF608Q9ULD9 1512 aaPredicted RBP38.41■■■■□ 3.74
SLC25A23-201ENST00000264088 GRIN2BQ13224 1484 aa38.34■■■■□ 3.73
SLC25A23-201ENST00000264088 RANGAP1P46060 587 aaPredicted RBP38.31■■■■□ 3.72
SLC25A23-201ENST00000264088 EIF4G3O43432 1585 aaKnown RBP38.3■■■■□ 3.72
SLC25A23-201ENST00000264088 ADAMTS12P58397 1594 aa38.25■■■■□ 3.71
SLC25A23-201ENST00000264088 VPS8Q8N3P4 1428 aa38.24■■■■□ 3.71
SLC25A23-201ENST00000264088 FHAD1B1AJZ9 1412 aa38.24■■■■□ 3.71
SLC25A23-201ENST00000264088 CTTNBP2Q8WZ74 1663 aa38.22■■■■□ 3.71
SLC25A23-201ENST00000264088 ARAP1Q96P48 1450 aa38.2■■■■□ 3.71
SLC25A23-201ENST00000264088 ARHGAP35Q9NRY4 1499 aa38.18■■■■□ 3.7
SLC25A23-201ENST00000264088 TRIM26Q12899 539 aaPredicted RBP38.11■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 184.6 ms